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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
1141 A_BomoFB_comp10286_c0_seq1
1844bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:6.15 TPM:6.74
1142 A_BomoFB_comp10286_c0_seq2
327bp
 glutamate_transporter_[Bombyx_mori]
FPKM:4.35 TPM:4.77
1143 A_BomoFB_comp10286_c0_seq3
231bp
 glutamate_transporter_[Bombyx_mori]
FPKM:32.34 TPM:35.44
1144 A_BomoFB_comp10286_c1_seq1
217bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.27 TPM:1.39
1145 A_BomoFB_comp10286_c1_seq2
627bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.93 TPM:3.22
1146 A_BomoFB_comp10286_c1_seq3
2083bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
FPKM:11.72 TPM:12.84
1147 A_BomoFB_comp10286_c1_seq4
1607bp
 chromobox-like_protein_5_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
FPKM:0.00 TPM:0.00
1148 A_BomoFB_comp10286_c2_seq1
2236bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:9.25 TPM:10.13
1149 A_BomoFB_comp10286_c2_seq2
373bp
 PREDICTED:_uncharacterized_protein_LOC105841802_[Bombyx_mori]
FPKM:8.84 TPM:9.69
1150 A_BomoFB_comp10286_c2_seq3
2145bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:5.56 TPM:6.09
1151 A_BomoFB_comp10286_c2_seq4
1557bp
FPKM:0.00 TPM:0.00
1152 A_BomoFB_comp10286_c2_seq5
2983bp
FPKM:41.68 TPM:45.66
1153 A_BomoFB_comp10286_c2_seq6
3254bp
 PREDICTED:_serrate_RNA_effector_molecule_homolog_[Amyelois_transitella]
FPKM:60.41 TPM:66.19
1154 A_BomoFB_comp10286_c2_seq7
503bp
FPKM:2.91 TPM:3.19
1155 A_BomoFB_comp10286_c2_seq8
1296bp
 PREDICTED:_calcium_release-activated_calcium_channel_protein_1-like_isoform_X4_[Bombyx_mori]
GO:0002115 P store-operated calcium entry
GO:0004252 F serine-type endopeptidase activity
GO:0005262 F calcium channel activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006508 P proteolysis
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0007399 P nervous system development
GO:0015279 F store-operated calcium channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
GO:0051928 P positive regulation of calcium ion transport
GO:0070588 P calcium ion transmembrane transport
GO:1903779 P regulation of cardiac conduction
FPKM:3.66 TPM:4.01
1156 A_BomoFB_comp10286_c3_seq1
663bp
FPKM:2.94 TPM:3.22
1157 A_BomoFB_comp10287_c0_seq1
1782bp
 hypothetical_protein_RR48_01035_[Papilio_machaon]
FPKM:1.59 TPM:1.75
1158 A_BomoFB_comp10287_c0_seq2
1803bp
 hypothetical_protein_RR48_01035_[Papilio_machaon]
FPKM:3.92 TPM:4.30
1159 A_BomoFB_comp10287_c0_seq3
2950bp
 PREDICTED:_uncharacterized_protein_LOC106718460_[Papilio_machaon]
FPKM:24.66 TPM:27.02
1160 A_BomoFB_comp10288_c0_seq1
335bp
FPKM:0.00 TPM:0.00
1161 A_BomoFB_comp10288_c0_seq2
1192bp
FPKM:3.01 TPM:3.30
1162 A_BomoFB_comp10289_c0_seq1
1373bp
 putative_CAD_trifunctional_protein,_partial_[Bombyx_mori]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0001889 P liver development
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006228 P UTP biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0007507 P heart development
GO:0007565 P female pregnancy
GO:0007595 P lactation
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0014075 P response to amine
GO:0016020 C membrane
GO:0016363 C nuclear matrix
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0017144 P xenobiotic metabolic process
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019899 F enzyme binding
GO:0031000 P response to caffeine
GO:0031100 P animal organ regeneration
GO:0033574 P response to testosterone
GO:0035690 P cellular response to xenobiotic stimulus
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0043195 C terminal bouton
GO:0043234 C protein-containing complex
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046134 P pyrimidine nucleoside biosynthetic process
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0051414 P response to cortisol
GO:0070062 C extracellular exosome
GO:0070335 F aspartate binding
GO:0071364 P cellular response to epidermal growth factor stimulus
FPKM:13.50 TPM:14.80
1163 A_BomoFB_comp10289_c0_seq2
5558bp
 PREDICTED:_CAD_protein_isoform_X1_[Amyelois_transitella]
GO:0000050 P urea cycle
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004070 F aspartate carbamoyltransferase activity
GO:0004087 F carbamoyl-phosphate synthase (ammonia) activity
GO:0004088 F carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
GO:0004151 F dihydroorotase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006221 P pyrimidine nucleotide biosynthetic process
GO:0006520 P cellular amino acid metabolic process
GO:0006526 P arginine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0006807 P nitrogen compound metabolic process
GO:0008152 P metabolic process
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0016743 F carboxyl- or carbamoyltransferase activity
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016874 F ligase activity
GO:0044205 P 'de novo' UMP biosynthetic process
GO:0046872 F metal ion binding
GO:0070406 F glutamine binding
FPKM:15.59 TPM:17.08
1164 A_BomoFB_comp102908_c0_seq1
338bp
 MULTISPECIES:_membrane-spanning_protein_[Bacillus]
FPKM:1.74 TPM:1.91
1165 A_BomoFB_comp10290_c0_seq1
1372bp
 PREDICTED:_BAG_family_molecular_chaperone_regulator_2-like_[Bombyx_mori]
GO:0000774 F adenyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006457 P protein folding
GO:0019538 P protein metabolic process
GO:0042802 F identical protein binding
GO:0050790 P regulation of catalytic activity
GO:0051087 F chaperone binding
GO:1900034 P regulation of cellular response to heat
FPKM:10.96 TPM:12.00
1166 A_BomoFB_comp10290_c0_seq2
5205bp
 hypothetical_protein_RR46_04746_[Papilio_xuthus]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:12.55 TPM:13.75
1167 A_BomoFB_comp10290_c0_seq3
1207bp
 PREDICTED:_BAG_family_molecular_chaperone_regulator_2-like_isoform_X1_[Bombyx_mori]
GO:0005575 C cellular_component
GO:0006457 P protein folding
GO:0019538 P protein metabolic process
GO:0042802 F identical protein binding
GO:0051087 F chaperone binding
FPKM:4.08 TPM:4.47
1168 A_BomoFB_comp10290_c0_seq4
5086bp
 hypothetical_protein_RR46_04746_[Papilio_xuthus]
GO:0004518 F nuclease activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:10.16 TPM:11.13
1169 A_BomoFB_comp10290_c0_seq5
774bp
 hypothetical_protein_FF38_07250_[Lucilia_cuprina]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0042802 F identical protein binding
FPKM:4.57 TPM:5.01
1170 A_BomoFB_comp10290_c0_seq6
1761bp
 hypothetical_protein_FF38_07250_[Lucilia_cuprina]
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0042802 F identical protein binding
FPKM:1.18 TPM:1.29
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