SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp10286_c1_seq3
Scaffold_idBomo_Scaf228
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000784 C chromosome, telomeric region
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005720 C heterochromatin
GO:0005721 C pericentric heterochromatin
GO:0005730 C nucleolus
GO:0010369 C chromocenter
GO:0016605 C PML body
GO:0017053 C transcription repressor complex
GO:0030674 F protein-macromolecule adaptor activity
GO:0035064 F methylated histone binding
GO:0035097 C histone methyltransferase complex
GO:0042803 F protein homodimerization activity
GO:0042826 F histone deacetylase binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0070491 F DNA-binding transcription factor binding
Transcript
Level		FPKM:11.72 TPM:12.84
ORF EntryO_BomoFB12765_complete:A_BomoFB_comp10286_c1_seq3
Sequence
(Nucleotide)
TCGTTACTGACTCAATAAGCGGAGCCATATATATTTTGAACGCGCCATTTTGGGAGCTTG
ATAGCAGCGACGCTTACGTGAATTCTCGTGATTTTGTGAAAAAGTGCCGCTCTTTCTTAG
CACAGCATGGGTAAAAAAGAGAAGAAAACGGAGACCAGTGAAGCATCGAGCGAGGAAGAA
TATGTCGTGGAGAAAGTTCTTAACAAACGTACAGTCAAAGGAAAGATCCAATATTTATTG
AAATGGAAAGGCTATAAGGAGGAAGAGAGTACTTGGGAGCCTGTTGAAAACTTAGACTGT
GAGGAACTGATTAAAACTTTTGAAGAAAATAGGAAAGAAAAAGAGAAATCTTCAAAAAAA
CCTGAGGACCGTGCTAAGAAGCGAGTCCGTGAATCAAGTGAGGAGACCAGTTCTGGTAGG
AAAGGTCGGGGGGCAAGTGTTTCGTCGGCTGACGAACCAAAAGAGAGCAAAAGGGAAAGA
AAGGAAGAAAAAAGCAAAACTGGCTTTGATAAAGGACTCAAAGCTGAGAAAATTATAGGC
GCTTCAGATGCTACCGGTGAACTAATGTTTTTGATCAAATGGACAGACTCTGACGAGGCT
GAACTAGTTCCAGCTAAAGTAGCTAATGTTAAATGCCCGCAGCAAGTAATAGCGTTTTAT
GAAGAAAGGCTAACTTGGCACACGCCATCCGAATCTGAATAATTAGAACTAAGTATTGCA
TAAGTGTTTGTATGGACTCAATGGTGGTGTCTGTTGTTTTTAGTTCATCTTCGAGAGTTC
ACAGAGCTCGGAGTGCAGCTGCATTGTAATTCTACATTTTATTGATTTTATTTTTAAACT
TGCTGCATAAATAAAAAATTCTGGCTGGCAAAAACTGGTTACATGTGACGTCATTTGGGG
CCAAGAAAACGAACTAACCATATATTAAACACTGATTTATAATTATAATGATTAGCCACT
TATGACATCATGCATGGATCATTCTACCTTGAAACTAAGAATAGGTTAAATGATGAATTA
TTAGGTTTTATTTGATGGTTTAAAATATAAATCTTTATTATTTCACAAAAATAGTTTGTG
AATGTTCAATTGAACTTAATTAAACCTCCTTTATAAATTGTTTCGTAATTGCTGTCCAGT
TGTCTATTGCTTCAGACTCGATGAGGACATGCAGTTTTGTTTTGAGAATTGTTAGTTTAT
TTTTAATTTAAAATACTTAAAAATATATGAATGACTATAAAAATGTATTTAATAAAATAC
ACAATGAACATAATACTTGTAATGCAAAACGGTTTTTGTACATTTAAATAAACAAAGATT
TTTTTTAACAGAATTACTTGGTATATTAAATAACAGTCAATTATTCCGGACGGTACAATA
TGACCCATTTACTTCCGAAGTATAGTAATCGGCACGAGTCTTGAGTAGGGGTGGCGCGGT
GGTGCTGGTGTACGATGCGCTGGATGAAGCTGCTGCTAAAGATCAACCAGTCCAAAACAA
AGATCATGATCGTGGATAAATCCGGCATCCTTGACGAGAAAAATATTCTAGGCCAATATG
ACATCGTCAAGGTTTTCGTGTACCTCAGCTCGATTATTACCAATAGGGGTGGATCGGAAA
CCGAAATAAGGCGACGCATCGGAATGGCCAAATCCGTTATGAGCCGGCTAAACAAAATAT
AGAGAGATCGTAACATACTCAAGAAGACGAAAGTGCAAATTGTTGAGACGCTCGTTTTCT
TAAAAAAATTTGTATGAGGCTGAGACCTGGACCTTGAAAGTCTGACAAGCGACGCATAGA
CGCGTTTGAGATGTGGTGCTGGCGGCGCATGTTGCGCATCCCTTGGACGGCTTTCCGGAT
AAACGCTTCCATCCTCAATGAGCTAAAAGTTGATCAGAGGCTATCCACTAAATGCCTATA
TAGAGTGCTTCAATATTTTGGTCCAATAGCAAGAAAACCCTCTGACAATCTGGAGAGACT
CATAGTGACGGAAAAAGTGGATGGAAGACGATTCAGAGGTCGGAGCCAAAAAAGATGGAA
TGACTTTTTTTTTTCTACCTTGAGAGGCTATTTCAGCGCAACT
(2083 bp)

- SilkBase 1999-2023 -