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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
991 A_BomaMG_comp113347_c0_seq1
385bp
FPKM:4.00 TPM:3.70
992 A_BomaMG_comp11334_c0_seq1
846bp
FPKM:4.02 TPM:3.73
993 A_BomaMG_comp11334_c1_seq1
861bp
FPKM:2.19 TPM:2.03
994 A_BomaMG_comp113351_c0_seq1
529bp
PREDICTED:_cytoskeleton-associated_protein_5-like_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0000930 C gamma-tubulin complex
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity
GO:0035371 C microtubule plus-end
GO:0043021 F ribonucleoprotein complex binding
GO:0043234 C protein-containing complex
GO:0050658 P RNA transport
GO:0051297 P centrosome cycle
GO:0051301 P cell division
FPKM:3.90 TPM:3.61
995 A_BomaMG_comp11335_c0_seq1
711bp
PREDICTED:_LOW_QUALITY_PROTEIN:_DNA-directed_RNA_polymerase_III_subunit_RPC8_[Bombyx_mori]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0032481 P positive regulation of type I interferon production
GO:0043231 C intracellular membrane-bounded organelle
GO:0045087 P innate immune response
GO:0051607 P defense response to virus
FPKM:4.22 TPM:3.91
996 A_BomaMG_comp11336_c0_seq1
811bp
Deoxynucleotidyltransferase_terminal-interacting_protein_2_[Operophtera_brumata]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0044822 F RNA binding
FPKM:0.00 TPM:0.00
997 A_BomaMG_comp11336_c0_seq2
888bp
Deoxynucleotidyltransferase_terminal-interacting_protein_2_[Operophtera_brumata]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0044822 F RNA binding
FPKM:3.40 TPM:3.15
998 A_BomaMG_comp11337_c0_seq1
1296bp
FPKM:3.28 TPM:3.04
999 A_BomaMG_comp11340_c0_seq1
437bp
PREDICTED:_uncharacterized_protein_LOC106355160_[Brassica_napus]
FPKM:2.79 TPM:2.58
1000 A_BomaMG_comp113414_c0_seq1
334bp
insulin-like_growth_factor_binding_protein_1_[Micropogonias_undulatus]
FPKM:3.32 TPM:3.08
1001 A_BomaMG_comp113420_c0_seq1
1016bp
allatotropin_[Manduca_sexta]
GO:0005576 C extracellular region
GO:0007218 P neuropeptide signaling pathway
FPKM:2.03 TPM:1.88
1002 A_BomaMG_comp113422_c0_seq1
326bp
PREDICTED:_myotubularin-related_protein_3_[Bombyx_mori]
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019898 C extrinsic component of membrane
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0046872 F metal ion binding
GO:0052629 F phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
FPKM:4.20 TPM:3.89
1003 A_BomaMG_comp11342_c0_seq1
300bp
FPKM:4.81 TPM:4.45
1004 A_BomaMG_comp11343_c0_seq1
698bp
FPKM:2.89 TPM:2.67
1005 A_BomaMG_comp11343_c1_seq1
202bp
FPKM:0.00 TPM:0.00
1006 A_BomaMG_comp113442_c0_seq1
1678bp
PREDICTED:_uncharacterized_protein_LOC101737115_[Bombyx_mori]
FPKM:3.21 TPM:2.97
1007 A_BomaMG_comp113449_c0_seq1
770bp
PREDICTED:_zinc_finger_protein_OZF_isoform_X2_[Bombyx_mori]
FPKM:3.39 TPM:3.14
1008 A_BomaMG_comp113467_c0_seq1
644bp
putative_malonyl-CoA-acyl_carrier_protein_transacylase,_mitochondrial_[Papilio_machaon]
GO:0003824 F catalytic activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0005739 C mitochondrion
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
FPKM:3.88 TPM:3.59
1009 A_BomaMG_comp11346_c0_seq1
513bp
FPKM:0.70 TPM:0.65
1010 A_BomaMG_comp11346_c0_seq2
499bp
FPKM:1.30 TPM:1.20
1011 A_BomaMG_comp113470_c0_seq1
357bp
tail-specific_protease_[Thalassolituus_oleivorans]
FPKM:3.47 TPM:3.21
1012 A_BomaMG_comp113486_c0_seq1
599bp
Uncharacterized_protein_OBRU01_26840_[Operophtera_brumata]
FPKM:2.84 TPM:2.63
1013 A_BomaMG_comp1134_c0_seq1
263bp
hypothetical_protein_[Sphingomonas_sp._Leaf22]
FPKM:2.00 TPM:1.85
1014 A_BomaMG_comp11350_c0_seq1
1276bp
PREDICTED:_phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X1_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
FPKM:3.21 TPM:2.97
1015 A_BomaMG_comp11351_c0_seq1
432bp
FPKM:5.28 TPM:4.89
1016 A_BomaMG_comp113525_c0_seq1
300bp
FPKM:2.83 TPM:2.62
1017 A_BomaMG_comp11352_c0_seq1
919bp
PREDICTED:_DNA_replication_complex_GINS_protein_SLD5_[Amyelois_transitella]
GO:0000727 P double-strand break repair via break-induced replication
GO:0000811 C GINS complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0031298 C replication fork protection complex
GO:0032508 P DNA duplex unwinding
GO:0043138 F 3'-5' DNA helicase activity
FPKM:4.31 TPM:4.00
1018 A_BomaMG_comp113533_c0_seq1
824bp
FPKM:2.00 TPM:1.85
1019 A_BomaMG_comp11353_c0_seq1
2837bp
PREDICTED:_DNA_repair_endonuclease_XPF_[Amyelois_transitella]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006298 P mismatch repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007131 P reciprocal meiotic recombination
GO:0007143 P female meiotic nuclear division
GO:0016321 P female meiosis chromosome segregation
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
GO:0045132 P meiotic chromosome segregation
GO:0046982 F protein heterodimerization activity
GO:0051321 P meiotic cell cycle
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
FPKM:3.25 TPM:3.01
1020 A_BomaMG_comp113548_c0_seq1
907bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX46_[Papilio_machaon]
FPKM:2.85 TPM:2.64
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