No. |
Name Length
|
Chromosome No./Scaffold Id Scaffold Length |
BLAST (vs nr) |
Gene ontology |
Transcript Level |
1021 |
A_BomaMG_comp11354_c0_seq1
1619bp |
|
PREDICTED:_S-phase_kinase-associated_protein_2-like_[Papilio_polytes] |
GO:0000082 |
P |
G1/S transition of mitotic cell cycle |
GO:0000086 |
P |
G2/M transition of mitotic cell cycle |
GO:0000209 |
P |
protein polyubiquitination |
GO:0004842 |
F |
ubiquitin-protein transferase activity |
GO:0005515 |
F |
protein binding |
GO:0005634 |
C |
nucleus |
GO:0005654 |
C |
nucleoplasm |
GO:0005730 |
C |
nucleolus |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0006511 |
P |
ubiquitin-dependent protein catabolic process |
GO:0008283 |
P |
cell population proliferation |
GO:0016567 |
P |
protein ubiquitination |
GO:0019005 |
C |
SCF ubiquitin ligase complex |
GO:0031145 |
P |
anaphase-promoting complex-dependent catabolic process |
GO:0033148 |
P |
positive regulation of intracellular estrogen receptor signaling pathway |
GO:0042802 |
F |
identical protein binding |
GO:0042981 |
P |
regulation of apoptotic process |
GO:0048661 |
P |
positive regulation of smooth muscle cell proliferation |
GO:0051726 |
P |
regulation of cell cycle |
GO:0061630 |
F |
ubiquitin protein ligase activity |
GO:0071460 |
P |
cellular response to cell-matrix adhesion |
GO:1902916 |
P |
positive regulation of protein polyubiquitination |
|
FPKM:2.80 TPM:2.59 |
1022 |
A_BomaMG_comp11355_c0_seq1
1381bp |
|
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_CG7065-like_[Bombyx_mori] |
GO:0003674 |
F |
molecular_function |
GO:0005575 |
C |
cellular_component |
GO:0008150 |
P |
biological_process |
|
FPKM:4.34 TPM:4.02 |
1023 |
A_BomaMG_comp113578_c0_seq1
409bp |
|
PREDICTED:_endophilin-A_isoform_X2_[Bombyx_mori] |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0006897 |
P |
endocytosis |
GO:0016020 |
C |
membrane |
GO:0042171 |
F |
lysophosphatidic acid acyltransferase activity |
GO:0048488 |
P |
synaptic vesicle endocytosis |
GO:0050803 |
P |
regulation of synapse structure or activity |
|
FPKM:2.68 TPM:2.48 |
1024 |
A_BomaMG_comp11357_c0_seq1
750bp |
|
|
|
FPKM:3.63 TPM:3.36 |
1025 |
A_BomaMG_comp113585_c0_seq1
1015bp |
|
|
|
FPKM:2.31 TPM:2.14 |
1026 |
A_BomaMG_comp11358_c0_seq1
473bp |
|
|
|
FPKM:3.49 TPM:3.23 |
1027 |
A_BomaMG_comp11359_c0_seq1
226bp |
|
|
|
FPKM:1.96 TPM:1.82 |
1028 |
A_BomaMG_comp11359_c1_seq1
900bp |
|
|
|
FPKM:3.63 TPM:3.36 |
1029 |
A_BomaMG_comp11362_c0_seq1
531bp |
|
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori] |
GO:0005085 |
F |
guanyl-nucleotide exchange factor activity |
GO:0005089 |
F |
guanyl-nucleotide exchange factor activity |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0005856 |
C |
cytoskeleton |
GO:0005886 |
C |
plasma membrane |
GO:0007275 |
P |
multicellular organism development |
GO:0007416 |
P |
synapse assembly |
GO:0008092 |
F |
cytoskeletal protein binding |
GO:0010923 |
P |
negative regulation of phosphatase activity |
GO:0016020 |
C |
membrane |
GO:0019898 |
C |
extrinsic component of membrane |
GO:0030054 |
C |
cell junction |
GO:0030175 |
C |
filopodium |
GO:0030425 |
C |
dendrite |
GO:0030676 |
F |
guanyl-nucleotide exchange factor activity |
GO:0031234 |
C |
extrinsic component of cytoplasmic side of plasma membrane |
GO:0035023 |
P |
regulation of Rho protein signal transduction |
GO:0042995 |
C |
cell projection |
GO:0043005 |
C |
neuron projection |
GO:0043197 |
C |
dendritic spine |
GO:0043547 |
P |
positive regulation of GTPase activity |
GO:0045202 |
C |
synapse |
GO:0048813 |
P |
dendrite morphogenesis |
|
FPKM:3.10 TPM:2.87 |
1030 |
A_BomaMG_comp11362_c1_seq1
538bp |
|
|
|
FPKM:2.76 TPM:2.55 |
1031 |
A_BomaMG_comp11363_c0_seq1
813bp |
|
Nep1_protein_[Bombyx_mori] |
GO:0000462 |
P |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO:0003723 |
F |
RNA binding |
GO:0005575 |
C |
cellular_component |
GO:0005634 |
C |
nucleus |
GO:0005730 |
C |
nucleolus |
GO:0006364 |
P |
rRNA processing |
GO:0008168 |
F |
methyltransferase activity |
GO:0009267 |
P |
cellular response to starvation |
GO:0016740 |
F |
transferase activity |
GO:0019843 |
F |
rRNA binding |
GO:0022008 |
P |
neurogenesis |
GO:0031167 |
P |
rRNA methylation |
GO:0032040 |
C |
small-subunit processome |
GO:0032259 |
P |
methylation |
GO:0040018 |
P |
positive regulation of multicellular organism growth |
GO:0042254 |
P |
ribosome biogenesis |
GO:0042742 |
P |
defense response to bacterium |
GO:0070037 |
F |
rRNA (pseudouridine) methyltransferase activity |
GO:0070475 |
P |
rRNA base methylation |
|
FPKM:3.65 TPM:3.38 |
1032 |
A_BomaMG_comp113641_c0_seq1
602bp |
|
|
|
FPKM:2.74 TPM:2.54 |
1033 |
A_BomaMG_comp11364_c0_seq1
1421bp |
|
PREDICTED:_WD_repeat-containing_protein_3_[Plutella_xylostella] |
GO:0000462 |
P |
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
GO:0005634 |
C |
nucleus |
GO:0005654 |
C |
nucleoplasm |
GO:0005730 |
C |
nucleolus |
GO:0006364 |
P |
rRNA processing |
GO:0030515 |
F |
snoRNA binding |
GO:0031965 |
C |
nuclear membrane |
GO:0032040 |
C |
small-subunit processome |
GO:0034388 |
C |
Pwp2p-containing subcomplex of 90S preribosome |
GO:0044822 |
F |
RNA binding |
|
FPKM:3.17 TPM:2.93 |
1034 |
A_BomaMG_comp11365_c0_seq1
434bp |
|
|
|
FPKM:0.94 TPM:0.87 |
1035 |
A_BomaMG_comp11365_c0_seq2
284bp |
|
|
|
FPKM:0.00 TPM:0.00 |
1036 |
A_BomaMG_comp11366_c0_seq1
850bp |
|
|
|
FPKM:4.25 TPM:3.94 |
1037 |
A_BomaMG_comp11368_c0_seq1
2097bp |
|
PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X1_[Bombyx_mori] |
GO:0004843 |
F |
thiol-dependent deubiquitinase |
GO:0005515 |
F |
protein binding |
GO:0005737 |
C |
cytoplasm |
GO:0006508 |
P |
proteolysis |
GO:0006511 |
P |
ubiquitin-dependent protein catabolic process |
GO:0006897 |
P |
endocytosis |
GO:0007275 |
P |
multicellular organism development |
GO:0007349 |
P |
cellularization |
GO:0007601 |
P |
visual perception |
GO:0008233 |
F |
peptidase activity |
GO:0008234 |
F |
cysteine-type peptidase activity |
GO:0008354 |
P |
germ cell migration |
GO:0008583 |
P |
mystery cell differentiation |
GO:0009950 |
P |
dorsal/ventral axis specification |
GO:0016579 |
P |
protein deubiquitination |
GO:0016787 |
F |
hydrolase activity |
GO:0030154 |
P |
cell differentiation |
GO:0035192 |
P |
nuclear cortical migration |
GO:0036459 |
F |
thiol-dependent deubiquitinase |
GO:0045824 |
P |
negative regulation of innate immune response |
GO:0045861 |
P |
negative regulation of proteolysis |
GO:0048477 |
P |
oogenesis |
GO:0050829 |
P |
defense response to Gram-negative bacterium |
GO:0050896 |
P |
response to stimulus |
|
FPKM:0.92 TPM:0.85 |
1038 |
A_BomaMG_comp11368_c0_seq2
2079bp |
|
PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori] |
GO:0004843 |
F |
thiol-dependent deubiquitinase |
GO:0005515 |
F |
protein binding |
GO:0005737 |
C |
cytoplasm |
GO:0006508 |
P |
proteolysis |
GO:0006511 |
P |
ubiquitin-dependent protein catabolic process |
GO:0006897 |
P |
endocytosis |
GO:0007275 |
P |
multicellular organism development |
GO:0007349 |
P |
cellularization |
GO:0007601 |
P |
visual perception |
GO:0008233 |
F |
peptidase activity |
GO:0008234 |
F |
cysteine-type peptidase activity |
GO:0008354 |
P |
germ cell migration |
GO:0008583 |
P |
mystery cell differentiation |
GO:0009950 |
P |
dorsal/ventral axis specification |
GO:0016579 |
P |
protein deubiquitination |
GO:0016787 |
F |
hydrolase activity |
GO:0030154 |
P |
cell differentiation |
GO:0035192 |
P |
nuclear cortical migration |
GO:0036459 |
F |
thiol-dependent deubiquitinase |
GO:0045824 |
P |
negative regulation of innate immune response |
GO:0045861 |
P |
negative regulation of proteolysis |
GO:0048477 |
P |
oogenesis |
GO:0050829 |
P |
defense response to Gram-negative bacterium |
GO:0050896 |
P |
response to stimulus |
|
FPKM:3.07 TPM:2.84 |
1039 |
A_BomaMG_comp1136_c0_seq1
302bp |
|
PREDICTED:_uncharacterized_protein_LOC105841508_[Bombyx_mori] |
|
FPKM:1.67 TPM:1.55 |
1040 |
A_BomaMG_comp1136_c1_seq1
564bp |
|
PREDICTED:_uncharacterized_protein_LOC107044482_[Diachasma_alloeum] |
|
FPKM:0.89 TPM:0.82 |
1041 |
A_BomaMG_comp11370_c0_seq1
1276bp |
|
RNA-dependent_DNA_polymerase_[Drosophila_melanogaster] |
GO:0003676 |
F |
nucleic acid binding |
GO:0003964 |
F |
RNA-directed DNA polymerase activity |
GO:0004190 |
F |
aspartic-type endopeptidase activity |
GO:0004518 |
F |
nuclease activity |
GO:0004519 |
F |
endonuclease activity |
GO:0006278 |
P |
RNA-dependent DNA biosynthetic process |
GO:0006508 |
P |
proteolysis |
GO:0008233 |
F |
peptidase activity |
GO:0015074 |
P |
DNA integration |
GO:0016740 |
F |
transferase activity |
GO:0016779 |
F |
nucleotidyltransferase activity |
GO:0016787 |
F |
hydrolase activity |
GO:0090305 |
P |
nucleic acid phosphodiester bond hydrolysis |
|
FPKM:2.91 TPM:2.69 |
1042 |
A_BomaMG_comp11371_c0_seq1
1501bp |
|
PREDICTED:_exportin-5_[Papilio_polytes] |
GO:0000049 |
F |
tRNA binding |
GO:0003723 |
F |
RNA binding |
GO:0003729 |
F |
mRNA binding |
GO:0005515 |
F |
protein binding |
GO:0005634 |
C |
nucleus |
GO:0005654 |
C |
nucleoplasm |
GO:0005737 |
C |
cytoplasm |
GO:0005829 |
C |
cytosol |
GO:0006611 |
P |
protein export from nucleus |
GO:0006810 |
P |
transport |
GO:0006886 |
P |
intracellular protein transport |
GO:0008536 |
F |
small GTPase binding |
GO:0008565 |
F |
obsolete protein transporter activity |
GO:0015031 |
P |
protein transport |
GO:0031047 |
P |
gene silencing by RNA |
GO:0035281 |
P |
pre-miRNA export from nucleus |
GO:0042565 |
C |
RNA nuclear export complex |
GO:0044822 |
F |
RNA binding |
GO:0070883 |
F |
pre-miRNA binding |
GO:0090631 |
F |
nucleocytoplasmic carrier activity |
GO:1900370 |
P |
positive regulation of RNA interference |
|
FPKM:2.82 TPM:2.61 |
1043 |
A_BomaMG_comp113727_c0_seq1
1485bp |
|
PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori] |
GO:0005085 |
F |
guanyl-nucleotide exchange factor activity |
GO:0005096 |
F |
GTPase activator activity |
GO:0005768 |
C |
endosome |
GO:0005829 |
C |
cytosol |
GO:0006897 |
P |
endocytosis |
GO:0007165 |
P |
signal transduction |
GO:0016020 |
C |
membrane |
GO:0032794 |
F |
GTPase activating protein binding |
GO:0043087 |
P |
regulation of GTPase activity |
GO:0043547 |
P |
positive regulation of GTPase activity |
GO:0051223 |
P |
regulation of protein transport |
|
FPKM:2.31 TPM:2.14 |
1044 |
A_BomaMG_comp11372_c0_seq1
1122bp |
|
|
|
FPKM:3.53 TPM:3.27 |
1045 |
A_BomaMG_comp113736_c0_seq1
649bp |
|
PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori] |
|
FPKM:3.41 TPM:3.15 |
1046 |
A_BomaMG_comp113739_c0_seq1
1764bp |
|
|
|
FPKM:2.12 TPM:1.96 |
1047 |
A_BomaMG_comp11373_c0_seq1
4199bp |
|
Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon] |
GO:0003676 |
F |
nucleic acid binding |
GO:0003964 |
F |
RNA-directed DNA polymerase activity |
GO:0004190 |
F |
aspartic-type endopeptidase activity |
GO:0004518 |
F |
nuclease activity |
GO:0004519 |
F |
endonuclease activity |
GO:0006278 |
P |
RNA-dependent DNA biosynthetic process |
GO:0006508 |
P |
proteolysis |
GO:0008233 |
F |
peptidase activity |
GO:0008270 |
F |
zinc ion binding |
GO:0015074 |
P |
DNA integration |
GO:0016740 |
F |
transferase activity |
GO:0016779 |
F |
nucleotidyltransferase activity |
GO:0016787 |
F |
hydrolase activity |
GO:0046872 |
F |
metal ion binding |
GO:0090305 |
P |
nucleic acid phosphodiester bond hydrolysis |
|
FPKM:2.20 TPM:2.03 |
1048 |
A_BomaMG_comp11375_c0_seq1
691bp |
|
PREDICTED:_pancreatic_triacylglycerol_lipase-like_isoform_X3_[Papilio_xuthus] |
|
FPKM:3.72 TPM:3.45 |
1049 |
A_BomaMG_comp113778_c0_seq1
629bp |
|
|
|
FPKM:2.57 TPM:2.38 |
1050 |
A_BomaMG_comp11378_c0_seq1
2318bp |
|
PREDICTED:_uncharacterized_protein_LOC101739413_[Bombyx_mori] |
|
FPKM:2.61 TPM:2.42 |