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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
91 A_BomaMG_comp102013_c0_seq1
386bp
FPKM:2.32 TPM:2.15
92 A_BomaMG_comp102023_c0_seq1
523bp
FPKM:3.57 TPM:3.31
93 A_BomaMG_comp102044_c0_seq1
1213bp
FPKM:2.46 TPM:2.28
94 A_BomaMG_comp10204_c0_seq1
209bp
FPKM:0.89 TPM:0.82
95 A_BomaMG_comp102069_c0_seq1
728bp
FPKM:2.42 TPM:2.24
96 A_BomaMG_comp102078_c0_seq1
417bp
FPKM:3.74 TPM:3.47
97 A_BomaMG_comp10209_c0_seq1
207bp
FPKM:0.93 TPM:0.86
98 A_BomaMG_comp1020_c0_seq1
412bp
PREDICTED:_DNA_replication_licensing_factor_mcm4-A-like_[Pyrus_x_bretschneideri]
FPKM:1.32 TPM:1.23
99 A_BomaMG_comp1020_c1_seq1
471bp
FPKM:0.94 TPM:0.87
100 A_BomaMG_comp10212_c0_seq1
287bp
hypothetical_protein_OsJ_24484_[Oryza_sativa_Japonica_Group]
FPKM:1.58 TPM:1.46
101 A_BomaMG_comp10214_c0_seq1
253bp
PREDICTED:_uncharacterized_protein_LOC101744110_isoform_X6_[Bombyx_mori]
FPKM:0.90 TPM:0.83
102 A_BomaMG_comp10214_c1_seq1
225bp
FPKM:0.66 TPM:0.62
103 A_BomaMG_comp10217_c0_seq1
224bp
putative_-like_protein,_partial_[Trichinella_papuae]
FPKM:1.35 TPM:1.25
104 A_BomaMG_comp102184_c0_seq1
1265bp
FPKM:2.97 TPM:2.75
105 A_BomaMG_comp10218_c0_seq1
225bp
PREDICTED:_uncharacterized_protein_LOC105380093_[Plutella_xylostella]
FPKM:1.33 TPM:1.23
106 A_BomaMG_comp10220_c0_seq1
254bp
PREDICTED:_type_I_inositol_3,4-bisphosphate_4-phosphatase_isoform_X3_[Fopius_arisanus]
FPKM:1.33 TPM:1.23
107 A_BomaMG_comp10221_c0_seq1
230bp
PREDICTED:_microsomal_triglyceride_transfer_protein_large_subunit-like_[Bombyx_mori]
FPKM:1.23 TPM:1.14
108 A_BomaMG_comp10223_c0_seq1
479bp
FPKM:1.37 TPM:1.27
109 A_BomaMG_comp10224_c0_seq1
250bp
PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]
GO:0003143 P embryonic heart tube morphogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0010468 P regulation of gene expression
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030326 P embryonic limb morphogenesis
GO:0030509 P BMP signaling pathway
GO:0048704 P embryonic skeletal system morphogenesis
GO:0048842 P positive regulation of axon extension involved in axon guidance
GO:0060971 P embryonic heart tube left/right pattern formation
GO:0060972 P left/right pattern formation
GO:0061371 P determination of heart left/right asymmetry
GO:0071907 P determination of digestive tract left/right asymmetry
GO:0097155 P fasciculation of sensory neuron axon
FPKM:0.47 TPM:0.43
110 A_BomaMG_comp102294_c0_seq1
2056bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0005516 F calmodulin binding
GO:0007275 P multicellular organism development
GO:0007286 P spermatid development
GO:0007291 P sperm individualization
GO:0007399 P nervous system development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0030154 P cell differentiation
GO:0042065 P glial cell growth
GO:0042066 P perineurial glial growth
GO:0043186 C P granule
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
FPKM:3.68 TPM:3.41
111 A_BomaMG_comp1022_c0_seq1
203bp
prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]
GO:0004656 F procollagen-proline 4-dioxygenase activity
GO:0005506 F iron ion binding
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0016020 C membrane
GO:0016222 C procollagen-proline 4-dioxygenase complex
GO:0016491 F oxidoreductase activity
GO:0016702 F oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0016705 F oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0018401 P peptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0030199 P collagen fibril organization
GO:0031418 F L-ascorbic acid binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.02 TPM:1.87
112 A_BomaMG_comp1022_c1_seq1
325bp
prolyl_4-hydroxylase_alpha_subunit_precursor_[Bombyx_mori]
FPKM:1.18 TPM:1.09
113 A_BomaMG_comp10231_c0_seq1
330bp
PREDICTED:_FGFR1_oncogene_partner-like_[Bombyx_mori]
FPKM:1.14 TPM:1.05
114 A_BomaMG_comp10235_c0_seq1
205bp
FPKM:0.97 TPM:0.90
115 A_BomaMG_comp10239_c0_seq1
278bp
FPKM:1.03 TPM:0.95
116 A_BomaMG_comp102419_c0_seq1
1382bp
PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori]
FPKM:2.68 TPM:2.48
117 A_BomaMG_comp102433_c0_seq1
602bp
ACHI_protein_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0010470 P regulation of gastrulation
GO:0038092 P nodal signaling pathway
GO:0045666 P positive regulation of neuron differentiation
GO:0060041 P retina development in camera-type eye
FPKM:4.29 TPM:3.97
118 A_BomaMG_comp102534_c0_seq1
1127bp
PREDICTED:_CLK4-associating_serine/arginine_rich_protein_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
FPKM:2.54 TPM:2.35
119 A_BomaMG_comp10254_c0_seq1
282bp
FPKM:0.00 TPM:0.00
120 A_BomaMG_comp10254_c0_seq2
263bp
FPKM:0.80 TPM:0.74
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