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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
121 A_BomaMG_comp102587_c0_seq1
221bp
PREDICTED:_uncharacterized_protein_LOC101745679_[Bombyx_mori]
FPKM:15.64 TPM:14.48
122 A_BomaMG_comp10261_c0_seq1
244bp
PREDICTED:_membrane-bound_alkaline_phosphatase-like_[Papilio_machaon]
GO:0003824 F catalytic activity
GO:0004035 F alkaline phosphatase activity
GO:0005886 C plasma membrane
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0031225 C anchored component of membrane
GO:0046872 F metal ion binding
FPKM:1.51 TPM:1.40
123 A_BomaMG_comp10262_c0_seq1
275bp
FPKM:1.77 TPM:1.64
124 A_BomaMG_comp1026_c0_seq1
307bp
bifunctional_3-demethylubiquinone_3-O-methyltransferase/2-octaprenyl-6-hydroxy_phenol_methylase_[Candidatus_Liberibacter_asiaticus]
FPKM:1.34 TPM:1.24
125 A_BomaMG_comp1026_c1_seq1
289bp
FPKM:1.24 TPM:1.15
126 A_BomaMG_comp10275_c0_seq1
229bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.62 TPM:0.58
127 A_BomaMG_comp102807_c0_seq1
735bp
PREDICTED:_uncharacterized_protein_LOC101747207_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005887 C integral component of plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0010633 P negative regulation of epithelial cell migration
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042802 F identical protein binding
GO:0070062 C extracellular exosome
GO:1903385 P regulation of homophilic cell adhesion
FPKM:2.94 TPM:2.72
128 A_BomaMG_comp1028_c0_seq1
253bp
putative_pol-like_protein_[Danaus_plexippus]
FPKM:1.79 TPM:1.66
129 A_BomaMG_comp10292_c0_seq1
202bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Papilio_xuthus]
FPKM:2.06 TPM:1.91
130 A_BomaMG_comp1029_c0_seq1
239bp
FPKM:2.15 TPM:1.99
131 A_BomaMG_comp102_c0_seq1
340bp
PREDICTED:_neurofibromin_isoform_X2_[Papilio_xuthus]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001937 P negative regulation of endothelial cell proliferation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0001952 P regulation of cell-matrix adhesion
GO:0001953 P negative regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0007519 P skeletal muscle tissue development
GO:0008285 P negative regulation of cell population proliferation
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0010468 P regulation of gene expression
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0016020 C membrane
GO:0016525 P negative regulation of angiogenesis
GO:0021510 P spinal cord development
GO:0021764 P amygdala development
GO:0021897 P forebrain astrocyte development
GO:0021915 P neural tube development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030336 P negative regulation of cell migration
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0034605 P cellular response to heat
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043407 P negative regulation of MAP kinase activity
GO:0043408 P regulation of MAPK cascade
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043535 P regulation of blood vessel endothelial cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045671 P negative regulation of osteoclast differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0046929 P negative regulation of neurotransmitter secretion
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048169 P regulation of long-term neuronal synaptic plasticity
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048712 P negative regulation of astrocyte differentiation
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
GO:0050890 P cognition
GO:0061534 P gamma-aminobutyric acid secretion, neurotransmission
GO:0061535 P glutamate secretion, neurotransmission
GO:0098597 P observational learning
GO:0098793 C presynapse
GO:1900271 P regulation of long-term synaptic potentiation
GO:1902043 P positive regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2001241 P positive regulation of extrinsic apoptotic signaling pathway in absence of ligand
FPKM:1.71 TPM:1.58
132 A_BomaMG_comp10300_c0_seq1
253bp
FPKM:1.35 TPM:1.25
133 A_BomaMG_comp10305_c0_seq1
442bp
PREDICTED:_thyroid_adenoma-associated_protein_homolog_isoform_X1_[Papilio_xuthus]
FPKM:0.91 TPM:0.84
134 A_BomaMG_comp103076_c0_seq1
404bp
PREDICTED:_serine/threonine-protein_phosphatase_6_regulatory_subunit_2_[Papilio_xuthus]
FPKM:4.27 TPM:3.95
135 A_BomaMG_comp1030_c0_seq1
394bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.96 TPM:0.89
136 A_BomaMG_comp10312_c0_seq1
424bp
Modifier_of_mdg4,_partial_[Operophtera_brumata]
FPKM:0.98 TPM:0.91
137 A_BomaMG_comp10315_c0_seq1
219bp
Plexin-B_[Operophtera_brumata]
GO:0002116 C semaphorin receptor complex
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017154 F semaphorin receptor activity
GO:0030154 P cell differentiation
GO:0030334 P regulation of cell migration
GO:0035021 P negative regulation of Rac protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0048841 P regulation of axon extension involved in axon guidance
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071678 P olfactory bulb axon guidance
GO:0097374 P sensory neuron axon guidance
GO:1902287 P semaphorin-plexin signaling pathway involved in axon guidance
FPKM:0.74 TPM:0.68
138 A_BomaMG_comp10317_c0_seq1
234bp
PREDICTED:_ras-related_protein_Rab-43_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007030 P Golgi organization
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019068 P virion assembly
GO:0030670 C phagocytic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0045335 C phagocytic vesicle
GO:0070062 C extracellular exosome
GO:0090382 P phagosome maturation
GO:1901998 P toxin transport
FPKM:0.58 TPM:0.54
139 A_BomaMG_comp103193_c0_seq1
1073bp
FPKM:2.73 TPM:2.53
140 A_BomaMG_comp1031_c0_seq1
220bp
bifunctional_5,10-methylene-tetrahydrofolate_dehydrogenase/5,10-methylene-tetrahydrofolate_cyclohydrolase_[Aerococcus_urinae]
FPKM:0.72 TPM:0.67
141 A_BomaMG_comp10323_c0_seq1
205bp
PREDICTED:_zinc_finger_protein_OZF-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.93 TPM:1.79
142 A_BomaMG_comp10325_c0_seq1
208bp
hypothetical_protein_AQJ30_36160_[Streptomyces_longwoodensis]
FPKM:0.91 TPM:0.84
143 A_BomaMG_comp103284_c0_seq1
1667bp
putative_peroxisomal_acyl-CoA_oxidase_1_[Agrotis_segetum]
GO:0000062 F fatty-acyl-CoA binding
GO:0003995 F acyl-CoA dehydrogenase activity
GO:0003997 F acyl-CoA oxidase activity
GO:0005777 C peroxisome
GO:0006091 P generation of precursor metabolites and energy
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0006693 P prostaglandin metabolic process
GO:0008152 P metabolic process
GO:0009055 F electron transfer activity
GO:0016491 F oxidoreductase activity
GO:0016627 F oxidoreductase activity, acting on the CH-CH group of donors
GO:0019395 P fatty acid oxidation
GO:0033539 P fatty acid beta-oxidation using acyl-CoA dehydrogenase
GO:0033540 P fatty acid beta-oxidation using acyl-CoA oxidase
GO:0050660 F flavin adenine dinucleotide binding
GO:0052890 F oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
GO:0055088 P lipid homeostasis
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.28 TPM:3.04
144 A_BomaMG_comp1032_c0_seq1
260bp
FPKM:2.48 TPM:2.30
145 A_BomaMG_comp10330_c0_seq1
230bp
Formin_Homology_2_Domain_containing_protein_[Trichomonas_vaginalis_G3]
FPKM:0.61 TPM:0.57
146 A_BomaMG_comp1034_c0_seq1
241bp
polyhomeotic_[Bombyx_mori]
FPKM:1.05 TPM:0.97
147 A_BomaMG_comp10355_c0_seq1
304bp
PREDICTED:_DNA-directed_RNA_polymerase_III_subunit_RPC3_[Plutella_xylostella]
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006383 P transcription by RNA polymerase III
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
FPKM:2.19 TPM:2.03
148 A_BomaMG_comp10356_c0_seq1
238bp
PREDICTED:_uncharacterized_protein_LOC105392935_[Plutella_xylostella]
FPKM:0.55 TPM:0.51
149 A_BomaMG_comp10357_c0_seq1
292bp
PREDICTED:_sorting_nexin-25_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005768 C endosome
GO:0006810 P transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032801 P receptor catabolic process
GO:0034713 F type I transforming growth factor beta receptor binding
GO:0035091 F phosphatidylinositol binding
GO:0060394 P negative regulation of pathway-restricted SMAD protein phosphorylation
FPKM:1.51 TPM:1.40
150 A_BomaMG_comp10362_c0_seq1
302bp
FPKM:1.11 TPM:1.03
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