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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6961 A_BomaMG_comp164647_c0_seq1
569bp
PREDICTED:_uncharacterized_protein_LOC105842367_isoform_X2_[Bombyx_mori]
FPKM:2.01 TPM:1.86
6962 A_BomaMG_comp16464_c0_seq1
320bp
FPKM:2.19 TPM:2.03
6963 A_BomaMG_comp16464_c1_seq1
542bp
FPKM:1.41 TPM:1.31
6964 A_BomaMG_comp164656_c0_seq1
318bp
FPKM:1.97 TPM:1.83
6965 A_BomaMG_comp16465_c0_seq1
610bp
hypothetical_protein_KGM_04993_[Danaus_plexippus]
FPKM:11.47 TPM:10.62
6966 A_BomaMG_comp16466_c0_seq1
3253bp
PREDICTED:_cytoskeleton-associated_protein_5-like_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000922 C spindle pole
GO:0000930 C gamma-tubulin complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity
GO:0035371 C microtubule plus-end
GO:0043234 C protein-containing complex
GO:0050658 P RNA transport
GO:0051297 P centrosome cycle
GO:0051301 P cell division
FPKM:6.17 TPM:5.71
6967 A_BomaMG_comp16466_c0_seq2
305bp
PREDICTED:_cytoskeleton-associated_protein_5-like_[Bombyx_mori]
GO:0000086 P G2/M transition of mitotic cell cycle
GO:0000922 C spindle pole
GO:0000930 C gamma-tubulin complex
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007051 P spindle organization
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0030951 P establishment or maintenance of microtubule cytoskeleton polarity
GO:0035371 C microtubule plus-end
GO:0043234 C protein-containing complex
GO:0050658 P RNA transport
GO:0051297 P centrosome cycle
GO:0051301 P cell division
FPKM:0.83 TPM:0.77
6968 A_BomaMG_comp164674_c0_seq1
714bp
PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
FPKM:1.72 TPM:1.59
6969 A_BomaMG_comp16467_c0_seq1
361bp
FPKM:1.70 TPM:1.57
6970 A_BomaMG_comp16468_c0_seq1
201bp
putative_major_facilitator_superfamily_[Diplodia_seriata]
FPKM:2.11 TPM:1.96
6971 A_BomaMG_comp16469_c0_seq1
1263bp
PREDICTED:_carbonyl_reductase_[NADPH]_1-like_[Amyelois_transitella]
GO:0004090 F carbonyl reductase (NADPH) activity
GO:0005737 C cytoplasm
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016655 F oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
GO:0017144 P xenobiotic metabolic process
GO:0042373 P vitamin K metabolic process
GO:0047021 F 15-hydroxyprostaglandin dehydrogenase (NADP+) activity
GO:0050221 F prostaglandin-E2 9-reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:1903561 C extracellular vesicle
FPKM:8.01 TPM:7.42
6972 A_BomaMG_comp16469_c1_seq1
217bp
FPKM:0.76 TPM:0.71
6973 A_BomaMG_comp16470_c0_seq1
2050bp
PREDICTED:_uncharacterized_protein_LOC101745835_isoform_X4_[Bombyx_mori]
FPKM:6.90 TPM:6.39
6974 A_BomaMG_comp16471_c0_seq1
663bp
mitochondrial_thioredoxin_2_[Bombyx_mori]
GO:0000103 P sulfate assimilation
GO:0001666 P response to hypoxia
GO:0005515 F protein binding
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0006457 P protein folding
GO:0006662 P glycerol ether metabolic process
GO:0006979 P response to oxidative stress
GO:0007584 P response to nutrient
GO:0008113 F peptide-methionine (S)-S-oxide reductase activity
GO:0009725 P response to hormone
GO:0009749 P response to glucose
GO:0014070 P response to organic cyclic compound
GO:0015035 F protein-disulfide reductase activity
GO:0030425 C dendrite
GO:0031669 P cellular response to nutrient levels
GO:0032403 F protein-containing complex binding
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0034599 P cellular response to oxidative stress
GO:0042493 P response to xenobiotic stimulus
GO:0043025 C neuronal cell body
GO:0045454 P cell redox homeostasis
GO:0048678 P response to axon injury
GO:0055114 P obsolete oxidation-reduction process
FPKM:92.02 TPM:85.20
6975 A_BomaMG_comp16472_c0_seq1
210bp
FPKM:1.74 TPM:1.61
6976 A_BomaMG_comp16472_c1_seq1
406bp
FPKM:1.21 TPM:1.12
6977 A_BomaMG_comp16473_c0_seq1
417bp
PREDICTED:_uncharacterized_protein_LOC101744110_isoform_X10_[Bombyx_mori]
FPKM:1.30 TPM:1.20
6978 A_BomaMG_comp16474_c0_seq1
654bp
hypothetical_protein_RR46_06606_[Papilio_xuthus]
FPKM:1.72 TPM:1.59
6979 A_BomaMG_comp16474_c1_seq1
286bp
ABC_superfamily_ATP-binding_cassette_transporter_ABC_protein_[Lactobacillus_helveticus]
FPKM:2.55 TPM:2.36
6980 A_BomaMG_comp16475_c0_seq1
350bp
PREDICTED:_2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline_decarboxylase-like_[Papilio_machaon]
GO:0005777 C peroxisome
GO:0006144 P purine nucleobase metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0019428 P allantoin biosynthetic process
GO:0019628 P urate catabolic process
FPKM:3.61 TPM:3.35
6981 A_BomaMG_comp16476_c0_seq1
484bp
PREDICTED:_dual_specificity_protein_phosphatase_22_isoform_X2_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000188 P obsolete inactivation of MAPK activity
GO:0002710 P negative regulation of T cell mediated immunity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0006915 P apoptotic process
GO:0007179 P transforming growth factor beta receptor signaling pathway
GO:0007275 P multicellular organism development
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008283 P cell population proliferation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0046330 P positive regulation of JNK cascade
GO:0050860 P negative regulation of T cell receptor signaling pathway
GO:0050868 P negative regulation of T cell activation
FPKM:1.34 TPM:1.25
6982 A_BomaMG_comp16476_c1_seq1
396bp
PREDICTED:_dual_specificity_protein_phosphatase_22_isoform_X2_[Bombyx_mori]
FPKM:1.26 TPM:1.17
6983 A_BomaMG_comp16477_c0_seq1
3429bp
PREDICTED:_FK506-binding_protein_59-like_[Bombyx_mori]
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005528 F FK506 binding
GO:0005789 C endoplasmic reticulum membrane
GO:0006457 P protein folding
GO:0007422 P peripheral nervous system development
GO:0007601 P visual perception
GO:0008152 P metabolic process
GO:0016027 C inaD signaling complex
GO:0016853 F isomerase activity
GO:0050896 P response to stimulus
GO:0050908 P detection of light stimulus involved in visual perception
GO:0051924 P regulation of calcium ion transport
GO:0061077 P chaperone-mediated protein folding
FPKM:9.35 TPM:8.66
6984 A_BomaMG_comp16478_c0_seq1
201bp
PREDICTED:_PHD_finger_protein_rhinoceros-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
FPKM:2.11 TPM:1.96
6985 A_BomaMG_comp16478_c1_seq1
319bp
putative_PHD_finger_protein_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
FPKM:0.74 TPM:0.68
6986 A_BomaMG_comp16478_c2_seq1
244bp
PREDICTED:_PHD_finger_protein_rhinoceros-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0008270 F zinc ion binding
GO:0042051 P compound eye photoreceptor development
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0046872 F metal ion binding
FPKM:1.51 TPM:1.40
6987 A_BomaMG_comp164798_c0_seq1
605bp
FPKM:1.52 TPM:1.41
6988 A_BomaMG_comp1647_c0_seq1
310bp
FPKM:0.52 TPM:0.48
6989 A_BomaMG_comp16480_c0_seq1
1706bp
phosphoribosylaminoimidazole_carboxylase,_phosphoribosylaminoimidazole_succinocarboxamide_synthetase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002121 P inter-male aggressive behavior
GO:0003824 F catalytic activity
GO:0004638 F phosphoribosylaminoimidazole carboxylase activity
GO:0004639 F phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0016831 F carboxy-lyase activity
GO:0016874 F ligase activity
GO:0046084 P adenine biosynthetic process
FPKM:11.32 TPM:10.48
6990 A_BomaMG_comp16481_c0_seq1
389bp
FPKM:1.31 TPM:1.21
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