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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6931 A_BomaMG_comp16442_c0_seq1
2838bp
Alpha-methylacyl-CoA_racemase_[Operophtera_brumata]
GO:0003824 F catalytic activity
GO:0005102 F signaling receptor binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0006631 P fatty acid metabolic process
GO:0006699 P bile acid biosynthetic process
GO:0008111 F alpha-methylacyl-CoA racemase activity
GO:0008206 P bile acid metabolic process
GO:0008300 P isoprenoid catabolic process
GO:0016853 F isomerase activity
FPKM:7.52 TPM:6.97
6932 A_BomaMG_comp16443_c0_seq1
736bp
FPKM:0.86 TPM:0.79
6933 A_BomaMG_comp16443_c0_seq2
366bp
FPKM:0.00 TPM:0.00
6934 A_BomaMG_comp16444_c0_seq1
236bp
Na/Pi_cotransporter_[Butyrivibrio_sp._FC2001]
FPKM:1.12 TPM:1.04
6935 A_BomaMG_comp16444_c1_seq1
364bp
unnamed_protein_product_[Oncorhynchus_mykiss]
FPKM:0.74 TPM:0.69
6936 A_BomaMG_comp164456_c0_seq1
224bp
FPKM:0.68 TPM:0.63
6937 A_BomaMG_comp16445_c0_seq1
1215bp
peroxisomal_membrane_protein_PMP22_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044351 P macropinocytosis
FPKM:124.92 TPM:115.67
6938 A_BomaMG_comp16446_c0_seq1
2655bp
PREDICTED:_repressor_of_RNA_polymerase_III_transcription_MAF1_homolog_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016480 P negative regulation of transcription by RNA polymerase III
FPKM:7.27 TPM:6.73
6939 A_BomaMG_comp16446_c0_seq2
1154bp
FPKM:0.34 TPM:0.32
6940 A_BomaMG_comp16447_c0_seq1
427bp
PREDICTED:_uncharacterized_protein_LOC105842919,_partial_[Bombyx_mori]
FPKM:1.80 TPM:1.66
6941 A_BomaMG_comp16447_c1_seq1
358bp
PREDICTED:_uncharacterized_protein_LOC106707304,_partial_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
FPKM:1.15 TPM:1.07
6942 A_BomaMG_comp164487_c0_seq1
578bp
hypothetical_protein_KGM_16953_[Danaus_plexippus]
FPKM:1.88 TPM:1.74
6943 A_BomaMG_comp16449_c0_seq1
2578bp
PREDICTED:_fibroblast_growth_factor_receptor_2-like_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000187 P obsolete activation of MAPK activity
GO:0001763 P morphogenesis of a branching structure
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005007 F fibroblast growth factor-activated receptor activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007426 P tracheal outgrowth, open tracheal system
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007429 P secondary branching, open tracheal system
GO:0007430 P terminal branching, open tracheal system
GO:0007435 P salivary gland morphogenesis
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0008347 P glial cell migration
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030517 P negative regulation of axon extension
GO:0035153 P epithelial cell type specification, open tracheal system
GO:0035215 P genital disc development
GO:0035230 C cytoneme
GO:0040018 P positive regulation of multicellular organism growth
GO:0046847 P filopodium assembly
GO:0060438 P trachea development
GO:0060439 P trachea morphogenesis
GO:0060446 P branching involved in open tracheal system development
FPKM:10.37 TPM:9.61
6944 A_BomaMG_comp1644_c0_seq1
324bp
FPKM:0.47 TPM:0.44
6945 A_BomaMG_comp16450_c0_seq1
352bp
PREDICTED:_uncharacterized_protein_LOC105842202_[Bombyx_mori]
GO:0001578 P microtubule bundle formation
GO:0001726 C ruffle
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0006810 P transport
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0015630 C microtubule cytoskeleton
GO:0015631 F tubulin binding
GO:0016020 C membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031116 P positive regulation of microtubule polymerization
GO:0031410 C cytoplasmic vesicle
GO:0035371 C microtubule plus-end
GO:0042995 C cell projection
GO:0044354 C macropinosome
GO:0044861 P protein transport into plasma membrane raft
GO:0046872 F metal ion binding
GO:0051010 F microtubule plus-end binding
GO:1990752 C microtubule end
FPKM:3.97 TPM:3.68
6946 A_BomaMG_comp16453_c0_seq1
461bp
FPKM:0.97 TPM:0.90
6947 A_BomaMG_comp16454_c0_seq1
989bp
PREDICTED:_exosome_complex_component_RRP4_[Bombyx_mori]
GO:0000175 F 3'-5'-exoribonuclease activity
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0000467 P exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 F RNA binding
GO:0004532 F exoribonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006364 P rRNA processing
GO:0008312 F 7S RNA binding
GO:0030307 P positive regulation of cell growth
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0043488 P regulation of mRNA stability
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0071034 P CUT catabolic process
GO:0071035 P nuclear polyadenylation-dependent rRNA catabolic process
GO:0071038 P nuclear polyadenylation-dependent tRNA catabolic process
GO:0071049 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
FPKM:10.14 TPM:9.39
6948 A_BomaMG_comp16455_c0_seq1
1128bp
PREDICTED:_phospholipase_D2_isoform_X4_[Bombyx_mori]
GO:0002031 P G protein-coupled receptor internalization
GO:0003824 F catalytic activity
GO:0004630 F phospholipase D activity
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0016020 C membrane
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0030334 P regulation of cell migration
GO:0031526 C brush border membrane
GO:0035091 F phosphatidylinositol binding
GO:0036465 P synaptic vesicle recycling
GO:0048017 P inositol lipid-mediated signaling
GO:0048870 P cell motility
GO:0050764 P regulation of phagocytosis
GO:0070290 F N-acylphosphatidylethanolamine-specific phospholipase D activity
GO:0098793 C presynapse
FPKM:9.01 TPM:8.34
6949 A_BomaMG_comp16457_c0_seq1
274bp
PREDICTED:_leucine-rich_repeat_serine/threonine-protein_kinase_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005525 F GTP binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006979 P response to oxidative stress
GO:0007264 P small GTPase mediated signal transduction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0034613 P cellular protein localization
GO:0034976 P response to endoplasmic reticulum stress
GO:0043025 C neuronal cell body
GO:0046872 F metal ion binding
GO:0048489 P synaptic vesicle transport
GO:0048846 P axon extension involved in axon guidance
GO:1901215 P negative regulation of neuron death
FPKM:1.07 TPM:0.99
6950 A_BomaMG_comp16458_c0_seq1
628bp
FPKM:1.75 TPM:1.62
6951 A_BomaMG_comp16458_c1_seq1
1723bp
FPKM:1.69 TPM:1.56
6952 A_BomaMG_comp16458_c1_seq2
1674bp
FPKM:0.00 TPM:0.00
6953 A_BomaMG_comp16459_c0_seq1
257bp
FPKM:1.71 TPM:1.58
6954 A_BomaMG_comp1645_c0_seq1
250bp
PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0009267 P cellular response to starvation
GO:0022008 P neurogenesis
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:0.93 TPM:0.86
6955 A_BomaMG_comp1645_c1_seq1
342bp
PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0043487 P regulation of RNA stability
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:1.05 TPM:0.98
6956 A_BomaMG_comp16460_c0_seq1
504bp
hypothetical_protein_KGM_15392_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007610 P behavior
GO:0007617 P mating behavior
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0007631 P feeding behavior
GO:0008049 P male courtship behavior
GO:0008343 P adult feeding behavior
GO:0032504 P multicellular organism reproduction
GO:0042594 P response to starvation
GO:0042595 P behavioral response to starvation
GO:0048511 P rhythmic process
FPKM:1.37 TPM:1.27
6957 A_BomaMG_comp16460_c1_seq1
384bp
PREDICTED:_protein_takeout_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0007610 P behavior
GO:0007617 P mating behavior
GO:0007622 P rhythmic behavior
GO:0007623 P circadian rhythm
GO:0007631 P feeding behavior
GO:0008049 P male courtship behavior
GO:0008343 P adult feeding behavior
GO:0032504 P multicellular organism reproduction
GO:0042594 P response to starvation
GO:0042595 P behavioral response to starvation
GO:0048511 P rhythmic process
FPKM:2.68 TPM:2.48
6958 A_BomaMG_comp16462_c0_seq1
2011bp
PREDICTED:_dynamin-like_120_kDa_protein,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0007005 P mitochondrion organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:2.91 TPM:2.70
6959 A_BomaMG_comp16462_c0_seq2
1999bp
PREDICTED:_dynamin-like_120_kDa_protein,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0006915 P apoptotic process
GO:0007005 P mitochondrion organization
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
FPKM:5.44 TPM:5.04
6960 A_BomaMG_comp16463_c0_seq1
3110bp
carboxyl/choline_esterase_CCE006a_[Helicoverpa_armigera]
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:94.40 TPM:87.41
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