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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6901 A_BomaMG_comp16420_c0_seq1
235bp
PREDICTED:_integrator_complex_subunit_9_[Bombyx_mori]
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:3.42 TPM:3.16
6902 A_BomaMG_comp16421_c0_seq1
1223bp
PREDICTED:_tRNA_selenocysteine_1-associated_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001514 P selenocysteine incorporation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0044822 F RNA binding
FPKM:9.91 TPM:9.18
6903 A_BomaMG_comp16422_c1_seq1
214bp
PREDICTED:_tetratricopeptide_repeat_protein_21B-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007224 P smoothened signaling pathway
GO:0008589 P regulation of smoothened signaling pathway
GO:0021591 P ventricular system development
GO:0021798 P forebrain dorsal/ventral pattern formation
GO:0030991 C intraciliary transport particle A
GO:0035721 P intraciliary retrograde transport
GO:0035735 P intraciliary transport involved in cilium assembly
GO:0042995 C cell projection
GO:0060271 P cilium assembly
GO:0061512 P protein localization to cilium
FPKM:6.45 TPM:5.98
6904 A_BomaMG_comp16423_c0_seq1
230bp
putative_RW1_protein_[Danaus_plexippus]
FPKM:3.07 TPM:2.84
6905 A_BomaMG_comp16425_c0_seq1
360bp
mutant_potassium_voltage-gated_channel_isoform_III_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
FPKM:1.52 TPM:1.40
6906 A_BomaMG_comp16425_c1_seq1
365bp
PREDICTED:_potassium_voltage-gated_channel_subfamily_H_member_6-like_isoform_X1_[Bombyx_mori]
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005267 F potassium channel activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0034765 P regulation of ion transmembrane transport
GO:0042391 P regulation of membrane potential
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
FPKM:1.66 TPM:1.54
6907 A_BomaMG_comp16426_c0_seq1
1634bp
PREDICTED:_kinesin-like_protein_KIF16B_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001704 P formation of primary germ layer
GO:0001919 P regulation of receptor recycling
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0007018 P microtubule-based movement
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007492 P endoderm development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008574 F plus-end-directed microtubule motor activity
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030705 P cytoskeleton-dependent intracellular transport
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032801 P receptor catabolic process
GO:0035091 F phosphatidylinositol binding
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0045022 P early endosome to late endosome transport
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
FPKM:1.89 TPM:1.75
6908 A_BomaMG_comp16426_c1_seq1
954bp
PREDICTED:_uncharacterized_protein_LOC106137879_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0001704 P formation of primary germ layer
GO:0001919 P regulation of receptor recycling
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005871 C kinesin complex
GO:0005874 C microtubule
GO:0006810 P transport
GO:0006895 P Golgi to endosome transport
GO:0007018 P microtubule-based movement
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0007492 P endoderm development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008574 F plus-end-directed microtubule motor activity
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030705 P cytoskeleton-dependent intracellular transport
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032801 P receptor catabolic process
GO:0035091 F phosphatidylinositol binding
GO:0043325 F phosphatidylinositol-3,4-bisphosphate binding
GO:0045022 P early endosome to late endosome transport
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
FPKM:2.41 TPM:2.23
6909 A_BomaMG_comp16427_c0_seq1
1036bp
FPKM:3.09 TPM:2.86
6910 A_BomaMG_comp16428_c0_seq1
319bp
PREDICTED:_double-stranded_RNA-binding_protein_1-like_[Jatropha_curcas]
FPKM:0.74 TPM:0.68
6911 A_BomaMG_comp16429_c0_seq1
445bp
PREDICTED:_protein_furry_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0008407 P chaeta morphogenesis
GO:0016055 P Wnt signaling pathway
GO:0030424 C axon
GO:0030425 C dendrite
GO:0030427 C site of polarized growth
GO:0035316 P non-sensory hair organization
GO:0035317 P imaginal disc-derived wing hair organization
GO:0042052 P rhabdomere development
GO:0044297 C cell body
GO:0045177 C apical part of cell
GO:0045860 P positive regulation of protein kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048601 P oocyte morphogenesis
GO:0048800 P antennal morphogenesis
GO:0048814 P regulation of dendrite morphogenesis
GO:0050773 P regulation of dendrite development
GO:0070593 P dendrite self-avoidance
GO:0090527 P actin filament reorganization
FPKM:0.90 TPM:0.83
6912 A_BomaMG_comp16429_c1_seq1
579bp
PREDICTED:_protein_furry_isoform_X4_[Bombyx_mori]
FPKM:1.79 TPM:1.66
6913 A_BomaMG_comp16430_c0_seq1
468bp
FPKM:1.54 TPM:1.42
6914 A_BomaMG_comp16430_c1_seq1
222bp
unnamed_protein_product_[Trypanosoma_congolense_IL3000]
FPKM:1.40 TPM:1.29
6915 A_BomaMG_comp16432_c0_seq1
413bp
FPKM:2.34 TPM:2.17
6916 A_BomaMG_comp16433_c0_seq1
265bp
Rab3_GTPase-activating_protein_catalytic_subunit_[Operophtera_brumata]
FPKM:2.74 TPM:2.54
6917 A_BomaMG_comp16434_c0_seq1
2097bp
PREDICTED:_armadillo_repeat-containing_protein_6_homolog_[Papilio_polytes]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:5.10 TPM:4.73
6918 A_BomaMG_comp16435_c0_seq1
233bp
nuclease_[Desulfovibrio_desulfuricans]
FPKM:4.69 TPM:4.34
6919 A_BomaMG_comp16435_c1_seq1
298bp
FPKM:2.30 TPM:2.13
6920 A_BomaMG_comp164394_c0_seq1
249bp
PREDICTED:_nodal_modulator_3_[Amyelois_transitella]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0031648 P protein destabilization
FPKM:5.65 TPM:5.24
6921 A_BomaMG_comp16439_c0_seq1
392bp
PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
FPKM:1.45 TPM:1.34
6922 A_BomaMG_comp16439_c1_seq1
1116bp
PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
FPKM:2.17 TPM:2.01
6923 A_BomaMG_comp16439_c2_seq1
509bp
PREDICTED:_zinc_finger_FYVE_domain-containing_protein_26_homolog_isoform_X1_[Bombyx_mori]
FPKM:1.45 TPM:1.34
6924 A_BomaMG_comp1643_c0_seq1
244bp
sensor_histidine_kinase_[Vibrio_cholerae]
FPKM:0.50 TPM:0.47
6925 A_BomaMG_comp1643_c1_seq1
286bp
FPKM:0.96 TPM:0.88
6926 A_BomaMG_comp164401_c0_seq1
252bp
FPKM:2.27 TPM:2.10
6927 A_BomaMG_comp16440_c0_seq1
1472bp
sulfotransferase_[Bombyx_mori]
GO:0004304 F estrone sulfotransferase activity
GO:0005496 F steroid binding
GO:0005737 C cytoplasm
GO:0008146 F sulfotransferase activity
GO:0008210 P estrogen metabolic process
GO:0008289 F lipid binding
GO:0016740 F transferase activity
GO:0050294 F steroid sulfotransferase activity
FPKM:8.09 TPM:7.49
6928 A_BomaMG_comp16440_c0_seq2
1337bp
sulfotransferase_[Bombyx_mori]
GO:0004304 F estrone sulfotransferase activity
GO:0005496 F steroid binding
GO:0005737 C cytoplasm
GO:0008146 F sulfotransferase activity
GO:0008210 P estrogen metabolic process
GO:0008289 F lipid binding
GO:0016740 F transferase activity
GO:0050294 F steroid sulfotransferase activity
FPKM:3.29 TPM:3.05
6929 A_BomaMG_comp16441_c0_seq1
464bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DHX35_[Plutella_xylostella]
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
FPKM:2.28 TPM:2.11
6930 A_BomaMG_comp164424_c0_seq1
376bp
PREDICTED:_cullin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
FPKM:3.14 TPM:2.90
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