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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
661 A_BomaMG_comp11050_c0_seq1
953bp
FPKM:2.19 TPM:2.03
662 A_BomaMG_comp11051_c0_seq1
695bp
putative_stromal_antigen_[Danaus_plexippus]
GO:0000775 C chromosome, centromeric region
GO:0000785 C chromatin
GO:0001228 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007062 P sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0016925 P protein sumoylation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051301 P cell division
FPKM:3.89 TPM:3.60
663 A_BomaMG_comp11052_c0_seq1
1271bp
FPKM:2.02 TPM:1.87
664 A_BomaMG_comp11052_c1_seq1
520bp
FPKM:3.20 TPM:2.97
665 A_BomaMG_comp11053_c0_seq1
1927bp
PREDICTED:_asparagine_synthetase_domain-containing_protein_CG17486_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004066 F asparagine synthase (glutamine-hydrolyzing) activity
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0006529 P asparagine biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008150 P biological_process
GO:0008652 P cellular amino acid biosynthetic process
GO:0042803 F protein homodimerization activity
FPKM:2.83 TPM:2.62
666 A_BomaMG_comp11054_c0_seq1
371bp
FPKM:1.61 TPM:1.49
667 A_BomaMG_comp11054_c1_seq1
569bp
FPKM:1.84 TPM:1.70
668 A_BomaMG_comp11055_c0_seq1
1003bp
FPKM:2.10 TPM:1.94
669 A_BomaMG_comp11056_c0_seq1
427bp
fatty_acid_synthase,_partial_[Agrotis_segetum]
GO:0001649 P osteoblast differentiation
GO:0003824 F catalytic activity
GO:0004312 F fatty acid synthase activity
GO:0004313 F [acyl-carrier-protein] S-acetyltransferase activity
GO:0004314 F [acyl-carrier-protein] S-malonyltransferase activity
GO:0004315 F 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004316 F 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
GO:0004317 F 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
GO:0004319 F enoyl-[acyl-carrier-protein] reductase (NADPH, B-specific) activity
GO:0004320 F oleoyl-[acyl-carrier-protein] hydrolase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006084 P acetyl-CoA metabolic process
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006633 P fatty acid biosynthetic process
GO:0008144 F obsolete drug binding
GO:0008152 P metabolic process
GO:0009058 P biosynthetic process
GO:0016020 C membrane
GO:0016295 F myristoyl-[acyl-carrier-protein] hydrolase activity
GO:0016296 F palmitoyl-[acyl-carrier-protein] hydrolase activity
GO:0016297 F acyl-[acyl-carrier-protein] hydrolase activity
GO:0016491 F oxidoreductase activity
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0016829 F lyase activity
GO:0019171 F 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
GO:0030879 P mammary gland development
GO:0031177 F phosphopantetheine binding
GO:0042470 C melanosome
GO:0042587 C glycogen granule
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0047117 F enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity
GO:0047451 F 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070062 C extracellular exosome
GO:0070402 F NADPH binding
GO:0071353 P cellular response to interleukin-4
FPKM:4.83 TPM:4.48
670 A_BomaMG_comp11057_c0_seq1
754bp
FPKM:2.72 TPM:2.52
671 A_BomaMG_comp11059_c0_seq1
726bp
FPKM:3.55 TPM:3.28
672 A_BomaMG_comp11060_c0_seq1
353bp
FPKM:2.37 TPM:2.19
673 A_BomaMG_comp11061_c0_seq1
1329bp
PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005774 C vacuolar membrane
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0019208 F phosphatase regulator activity
GO:0019902 F phosphatase binding
GO:0035091 F phosphatidylinositol binding
GO:0042552 P myelination
GO:0042803 F protein homodimerization activity
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051262 P protein tetramerization
FPKM:3.21 TPM:2.98
674 A_BomaMG_comp11062_c0_seq1
516bp
PREDICTED:_exocyst_complex_component_4-like_[Plutella_xylostella]
FPKM:3.14 TPM:2.91
675 A_BomaMG_comp11062_c1_seq1
703bp
FPKM:2.73 TPM:2.53
676 A_BomaMG_comp11063_c0_seq1
1006bp
FPKM:2.67 TPM:2.47
677 A_BomaMG_comp11064_c0_seq1
3055bp
PREDICTED:_pre-rRNA-processing_protein_TSR1_homolog_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0042254 P ribosome biogenesis
GO:0042255 P ribosome assembly
GO:0044822 F RNA binding
FPKM:2.09 TPM:1.94
678 A_BomaMG_comp11067_c0_seq1
520bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
GO:0001558 P regulation of cell growth
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006629 P lipid metabolic process
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019915 P lipid storage
GO:0045444 P fat cell differentiation
GO:0051647 P nucleus localization
GO:0060612 P adipose tissue development
FPKM:3.20 TPM:2.97
679 A_BomaMG_comp11068_c0_seq1
1197bp
PREDICTED:_probable_enoyl-CoA_hydratase_[Papilio_polytes]
GO:0003824 F catalytic activity
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016829 F lyase activity
GO:0043956 F 3-hydroxypropionyl-CoA dehydratase activity
FPKM:3.20 TPM:2.96
680 A_BomaMG_comp11069_c0_seq1
1298bp
E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0046872 F metal ion binding
GO:0071339 C MLL1 complex
FPKM:3.61 TPM:3.34
681 A_BomaMG_comp11070_c0_seq1
1493bp
Nuclear_fragile_X_mental_retardation-interacting_protein_1_[Papilio_xuthus]
GO:0000492 P box C/D snoRNP assembly
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005726 C perichromatin fibrils
GO:0005730 C nucleolus
GO:0008023 C transcription elongation factor complex
GO:0016363 C nuclear matrix
GO:0022626 C cytosolic ribosome
GO:0030515 F snoRNA binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070761 C pre-snoRNP complex
FPKM:2.81 TPM:2.60
682 A_BomaMG_comp11072_c0_seq1
576bp
PREDICTED:_kinase_suppressor_of_Ras_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:3.35 TPM:3.10
683 A_BomaMG_comp11073_c0_seq1
394bp
hypothetical_protein_[Ammonifex_degensii]
FPKM:2.55 TPM:2.36
684 A_BomaMG_comp11075_c0_seq1
227bp
FPKM:0.00 TPM:0.00
685 A_BomaMG_comp110760_c0_seq1
486bp
PREDICTED:_LOW_QUALITY_PROTEIN:_protein_fem-1_homolog_A_[Bombyx_mori]
FPKM:4.45 TPM:4.12
686 A_BomaMG_comp11079_c0_seq1
2073bp
PREDICTED:_sphingosine_kinase_1-like_[Papilio_xuthus]
GO:0000166 F nucleotide binding
GO:0001568 P blood vessel development
GO:0003376 P sphingosine-1-phosphate receptor signaling pathway
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0006669 P sphinganine-1-phosphate biosynthetic process
GO:0006670 P sphingosine metabolic process
GO:0007420 P brain development
GO:0007565 P female pregnancy
GO:0008283 P cell population proliferation
GO:0008284 P positive regulation of cell population proliferation
GO:0008481 F sphinganine kinase activity
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0017050 F D-erythro-sphingosine kinase activity
GO:0038036 F sphingosine-1-phosphate receptor activity
GO:0043066 P negative regulation of apoptotic process
GO:0046512 P sphingosine biosynthetic process
GO:0046834 P lipid phosphorylation
FPKM:2.63 TPM:2.43
687 A_BomaMG_comp11080_c0_seq1
1210bp
Uncharacterized_protein_OBRU01_16214_[Operophtera_brumata]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007218 P neuropeptide signaling pathway
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0032400 P melanosome localization
GO:0032402 P melanosome transport
GO:0032438 P melanosome organization
GO:0033162 C melanosome membrane
GO:0035240 F dopamine binding
GO:0035584 P calcium-mediated signaling using intracellular calcium source
GO:0035643 F L-DOPA receptor activity
GO:0042470 C melanosome
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050848 P regulation of calcium-mediated signaling
GO:0072544 F L-DOPA binding
GO:0072545 F tyrosine binding
GO:1902908 P regulation of melanosome transport
GO:1903056 P regulation of melanosome organization
FPKM:3.26 TPM:3.02
688 A_BomaMG_comp11081_c0_seq1
983bp
FLJ37770-like_protein,_partial_[Acromyrmex_echinatior]
FPKM:1.88 TPM:1.74
689 A_BomaMG_comp11081_c0_seq2
1327bp
PREDICTED:_uncharacterized_protein_LOC105145454,_partial_[Acromyrmex_echinatior]
FPKM:1.58 TPM:1.46
690 A_BomaMG_comp11082_c0_seq1
299bp
PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
FPKM:6.27 TPM:5.81
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