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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
631 A_BomaMG_comp11021_c0_seq1
293bp
hypothetical_protein_[Photobacterium_aquae]
FPKM:3.00 TPM:2.77
632 A_BomaMG_comp110243_c0_seq1
302bp
PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
FPKM:5.29 TPM:4.90
633 A_BomaMG_comp11025_c0_seq1
1090bp
PREDICTED:_uncharacterized_protein_LOC105380120_[Plutella_xylostella]
FPKM:2.53 TPM:2.35
634 A_BomaMG_comp11026_c0_seq1
360bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X3_[Bombyx_mori]
FPKM:1.33 TPM:1.23
635 A_BomaMG_comp11026_c1_seq1
816bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X3_[Bombyx_mori]
FPKM:2.45 TPM:2.27
636 A_BomaMG_comp11027_c0_seq1
973bp
FPKM:2.18 TPM:2.02
637 A_BomaMG_comp11028_c0_seq1
1183bp
PREDICTED:_PAX3-_and_PAX7-binding_protein_1_[Bombyx_mori]
FPKM:1.99 TPM:1.84
638 A_BomaMG_comp11031_c0_seq1
1071bp
FPKM:2.51 TPM:2.33
639 A_BomaMG_comp11034_c0_seq1
218bp
PREDICTED:_uncharacterized_protein_LOC106142400_[Amyelois_transitella]
FPKM:0.75 TPM:0.69
640 A_BomaMG_comp11034_c0_seq2
587bp
PREDICTED:_uncharacterized_protein_LOC106142400_[Amyelois_transitella]
FPKM:3.09 TPM:2.86
641 A_BomaMG_comp11035_c0_seq1
856bp
PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_isoform_X5_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006313 P transposition, DNA-mediated
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:3.11 TPM:2.88
642 A_BomaMG_comp11036_c0_seq1
1210bp
PREDICTED:_BCL-6_corepressor-like_protein_1_[Papilio_polytes]
FPKM:2.11 TPM:1.95
643 A_BomaMG_comp11036_c1_seq1
244bp
hypothetical_protein_KGM_05416_[Danaus_plexippus]
FPKM:2.01 TPM:1.86
644 A_BomaMG_comp11037_c0_seq1
1464bp
PREDICTED:_nuclear_receptor-binding_protein_homolog_[Bombyx_mori]
GO:0004672 F protein kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005938 C cell cortex
GO:0006468 P protein phosphorylation
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
FPKM:2.48 TPM:2.30
645 A_BomaMG_comp11038_c0_seq1
1324bp
PREDICTED:_probable_cytosolic_Fe-S_cluster_assembly_factor_GL21135_[Amyelois_transitella]
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:2.52 TPM:2.33
646 A_BomaMG_comp11039_c0_seq1
647bp
PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Bombyx_mori]
FPKM:2.40 TPM:2.22
647 A_BomaMG_comp1103_c0_seq1
375bp
hypothetical_protein_ALC57_16107_[Trachymyrmex_cornetzi]
FPKM:1.05 TPM:0.97
648 A_BomaMG_comp11040_c0_seq1
1913bp
PREDICTED:_N-acetylgalactosaminyltransferase_7_isoform_X1_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0004653 F polypeptide N-acetylgalactosaminyltransferase activity
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0009312 P oligosaccharide biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030246 F carbohydrate binding
GO:0046872 F metal ion binding
FPKM:2.72 TPM:2.51
649 A_BomaMG_comp11041_c0_seq1
622bp
PREDICTED:_neurofilament_heavy_polypeptide-like_isoform_X4_[Bombyx_mori]
GO:0004601 F peroxidase activity
GO:0005344 F oxygen carrier activity
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006979 P response to oxidative stress
GO:0015671 P oxygen transport
GO:0016020 C membrane
GO:0098869 P cellular oxidant detoxification
FPKM:3.15 TPM:2.92
650 A_BomaMG_comp11042_c0_seq1
889bp
FPKM:2.58 TPM:2.39
651 A_BomaMG_comp11043_c0_seq1
1579bp
PREDICTED:_zinc_finger_protein_432_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.61 TPM:2.42
652 A_BomaMG_comp11044_c0_seq1
2389bp
PREDICTED:_ATP-binding_cassette_sub-family_G_member_1-like_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010888 P negative regulation of lipid storage
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0055037 C recycling endosome
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
FPKM:2.25 TPM:2.09
653 A_BomaMG_comp11045_c0_seq1
1469bp
AMP-binding_enzyme_[Bombyx_mori]
FPKM:2.63 TPM:2.43
654 A_BomaMG_comp11046_c0_seq1
490bp
cell_division_cycle_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008353 F RNA polymerase II CTD heptapeptide repeat kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
FPKM:2.97 TPM:2.75
655 A_BomaMG_comp110477_c0_seq1
1055bp
PREDICTED:_protein_lunapark-B_[Papilio_polytes]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0046872 F metal ion binding
GO:0071782 C endoplasmic reticulum tubular network
GO:0071786 P endoplasmic reticulum tubular network organization
FPKM:2.36 TPM:2.19
656 A_BomaMG_comp11047_c0_seq1
1511bp
PREDICTED:_ras-related_C3_botulinum_toxin_substrate_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001891 C phagocytic cup
GO:0001934 P positive regulation of protein phosphorylation
GO:0002093 P auditory receptor cell morphogenesis
GO:0002551 P mast cell chemotaxis
GO:0003382 P epithelial cell morphogenesis
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006935 P chemotaxis
GO:0006972 P hyperosmotic response
GO:0007010 P cytoskeleton organization
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007264 P small GTPase mediated signal transduction
GO:0007411 P axon guidance
GO:0008152 P metabolic process
GO:0008283 P cell population proliferation
GO:0008361 P regulation of cell size
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010762 P regulation of fibroblast migration
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0014041 P regulation of neuron maturation
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016358 P dendrite development
GO:0016477 P cell migration
GO:0016601 P Rac protein signal transduction
GO:0017137 F small GTPase binding
GO:0019897 C extrinsic component of plasma membrane
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021799 P cerebral cortex radially oriented cell migration
GO:0021831 P embryonic olfactory bulb interneuron precursor migration
GO:0021894 P cerebral cortex GABAergic interneuron development
GO:0022604 P regulation of cell morphogenesis
GO:0030027 C lamellipodium
GO:0030032 P lamellipodium assembly
GO:0030036 P actin cytoskeleton organization
GO:0030041 P actin filament polymerization
GO:0030334 P regulation of cell migration
GO:0030742 F GTP-dependent protein binding
GO:0030838 P positive regulation of actin filament polymerization
GO:0031410 C cytoplasmic vesicle
GO:0031529 P ruffle organization
GO:0031901 C early endosome membrane
GO:0031996 F thioesterase binding
GO:0032587 C ruffle membrane
GO:0032707 P negative regulation of interleukin-23 production
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035567 P non-canonical Wnt signaling pathway
GO:0036464 C cytoplasmic ribonucleoprotein granule
GO:0042470 C melanosome
GO:0042826 F histone deacetylase binding
GO:0042995 C cell projection
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0043652 P engulfment of apoptotic cell
GO:0045216 P cell-cell junction organization
GO:0045453 P bone resorption
GO:0045740 P positive regulation of DNA replication
GO:0048532 P anatomical structure arrangement
GO:0048812 P neuron projection morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0048870 P cell motility
GO:0048873 P homeostasis of number of cells within a tissue
GO:0051022 F Rho GDP-dissociation inhibitor binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051668 P localization within membrane
GO:0051894 P positive regulation of focal adhesion assembly
GO:0051932 P synaptic transmission, GABAergic
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0060263 P regulation of respiratory burst
GO:0070062 C extracellular exosome
GO:0071260 P cellular response to mechanical stimulus
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071542 P dopaminergic neuron differentiation
GO:0072659 P protein localization to plasma membrane
GO:0090023 P positive regulation of neutrophil chemotaxis
GO:0090103 P cochlea morphogenesis
GO:0097178 P ruffle assembly
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
FPKM:2.75 TPM:2.54
657 A_BomaMG_comp110488_c0_seq1
701bp
FPKM:3.00 TPM:2.77
658 A_BomaMG_comp11048_c0_seq1
267bp
AP-2_complex_subunit_beta_[Papilio_xuthus]
GO:0003279 P cardiac septum development
GO:0003281 P ventricular septum development
GO:0005515 F protein binding
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0007507 P heart development
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030117 C membrane coat
GO:0030118 C clathrin coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030276 F clathrin binding
GO:0032403 F protein-containing complex binding
GO:0035904 P aorta development
GO:0043231 C intracellular membrane-bounded organelle
GO:0048268 P clathrin coat assembly
GO:0060976 P coronary vasculature development
FPKM:8.05 TPM:7.45
659 A_BomaMG_comp11049_c0_seq1
1978bp
PREDICTED:_beta-1,3-galactosyltransferase_6_[Papilio_polytes]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006486 P protein glycosylation
GO:0008378 F galactosyltransferase activity
GO:0008499 F UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0035250 F UDP-galactosyltransferase activity
GO:0047220 F galactosylxylosylprotein 3-beta-galactosyltransferase activity
FPKM:2.88 TPM:2.67
660 A_BomaMG_comp1104_c0_seq1
335bp
FPKM:1.32 TPM:1.22
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