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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6331 A_BomaMG_comp160232_c0_seq1
232bp
MFS_transporter_[Serratia_marcescens]
FPKM:1.19 TPM:1.10
6332 A_BomaMG_comp160237_c0_seq1
442bp
PREDICTED:_metabotropic_glutamate_receptor_5-like_[Bombyx_mori]
GO:0001639 F PLC activating G protein-coupled glutamate receptor activity
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0007206 P phospholipase C-activating G protein-coupled glutamate receptor signaling pathway
GO:0007216 P G protein-coupled glutamate receptor signaling pathway
GO:0007268 P chemical synaptic transmission
GO:0008066 F glutamate receptor activity
GO:0014048 P regulation of glutamate secretion
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0019722 P calcium-mediated signaling
GO:0030331 F estrogen receptor binding
GO:0030424 C axon
GO:0038042 P G protein-coupled receptor signaling pathway
GO:0042734 C presynaptic membrane
GO:0042802 F identical protein binding
GO:0043197 C dendritic spine
GO:0051482 P positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway
GO:0051899 P membrane depolarization
GO:0051932 P synaptic transmission, GABAergic
GO:0051966 P regulation of synaptic transmission, glutamatergic
FPKM:3.12 TPM:2.89
6333 A_BomaMG_comp160239_c0_seq1
838bp
PREDICTED:_protein_sprint_[Bombyx_mori]
FPKM:1.75 TPM:1.62
6334 A_BomaMG_comp16023_c0_seq1
266bp
putative_Integrator_complex_subunit_4_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:4.26 TPM:3.94
6335 A_BomaMG_comp16024_c0_seq1
1352bp
PREDICTED:_CD109_antigen-like_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0001942 P hair follicle development
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0009986 C cell surface
GO:0010466 P negative regulation of peptidase activity
GO:0010839 P negative regulation of keratinocyte proliferation
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031225 C anchored component of membrane
GO:0045616 P regulation of keratinocyte differentiation
GO:0050431 F transforming growth factor beta binding
GO:0061045 P negative regulation of wound healing
GO:0072675 P osteoclast fusion
FPKM:1.70 TPM:1.57
6336 A_BomaMG_comp16024_c0_seq2
596bp
PREDICTED:_CD109_antigen-like_[Bombyx_mori]
FPKM:0.18 TPM:0.17
6337 A_BomaMG_comp16025_c0_seq1
686bp
HM00018_[Heliconius_melpomene]
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016050 P vesicle organization
GO:0019898 C extrinsic component of membrane
GO:0030904 C retromer complex
GO:0031901 C early endosome membrane
GO:0034498 P early endosome to Golgi transport
GO:0035091 F phosphatidylinositol binding
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
FPKM:2.22 TPM:2.05
6338 A_BomaMG_comp16026_c0_seq1
552bp
FPKM:2.56 TPM:2.37
6339 A_BomaMG_comp16026_c1_seq1
509bp
FPKM:1.55 TPM:1.44
6340 A_BomaMG_comp16027_c0_seq1
1857bp
PREDICTED:_mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008013 F beta-catenin binding
GO:0016592 C mediator complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:2.54 TPM:2.36
6341 A_BomaMG_comp160282_c0_seq1
353bp
FPKM:0.99 TPM:0.91
6342 A_BomaMG_comp160289_c0_seq1
515bp
FPKM:1.52 TPM:1.41
6343 A_BomaMG_comp16028_c0_seq1
374bp
PREDICTED:_coiled-coil_and_C2_domain-containing_protein_1-like_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:2.99 TPM:2.77
6344 A_BomaMG_comp1602_c0_seq1
226bp
FPKM:1.96 TPM:1.82
6345 A_BomaMG_comp16030_c0_seq1
222bp
FPKM:2.10 TPM:1.94
6346 A_BomaMG_comp16031_c0_seq1
836bp
PREDICTED:_WD_repeat-containing_protein_mio_[Bombyx_mori]
GO:0001674 C female germ cell nucleus
GO:0005634 C nucleus
GO:0005764 C lysosome
GO:0006302 P double-strand break repair
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0009994 P oocyte differentiation
GO:0010507 P negative regulation of autophagy
GO:0030154 P cell differentiation
GO:0030716 P oocyte fate determination
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0035859 C Seh1-associated complex
GO:0040020 P regulation of meiotic nuclear division
GO:0043234 C protein-containing complex
GO:0044754 C autolysosome
GO:0045793 P positive regulation of cell size
GO:0048477 P oogenesis
GO:1903432 P regulation of TORC1 signaling
FPKM:2.22 TPM:2.06
6347 A_BomaMG_comp16031_c1_seq1
269bp
PREDICTED:_WD_repeat-containing_protein_mio_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0030054 C cell junction
GO:0032008 P positive regulation of TOR signaling
GO:0034198 P cellular response to amino acid starvation
GO:0034629 P protein-containing complex localization
GO:0061700 C GATOR2 complex
FPKM:3.00 TPM:2.78
6348 A_BomaMG_comp16032_c0_seq1
611bp
PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
FPKM:0.81 TPM:0.75
6349 A_BomaMG_comp16032_c0_seq2
824bp
PREDICTED:_rotatin-like_isoform_X2_[Bombyx_mori]
FPKM:1.20 TPM:1.11
6350 A_BomaMG_comp160334_c0_seq1
241bp
FPKM:2.09 TPM:1.94
6351 A_BomaMG_comp160346_c0_seq1
683bp
FPKM:1.82 TPM:1.69
6352 A_BomaMG_comp16035_c0_seq1
484bp
FPKM:2.91 TPM:2.70
6353 A_BomaMG_comp160363_c0_seq1
258bp
hypothetical_protein_M404DRAFT_1006877_[Pisolithus_tinctorius_Marx_270]
FPKM:0.00 TPM:0.00
6354 A_BomaMG_comp160369_c0_seq1
528bp
PREDICTED:_condensin-2_complex_subunit_D3-like_[Amyelois_transitella]
FPKM:2.05 TPM:1.90
6355 A_BomaMG_comp16036_c0_seq1
482bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_50_[Amyelois_transitella]
FPKM:1.58 TPM:1.46
6356 A_BomaMG_comp16038_c0_seq1
738bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:1.52 TPM:1.41
6357 A_BomaMG_comp16039_c0_seq1
769bp
PREDICTED:_gamma-glutamylcyclotransferase-like_[Papilio_machaon]
GO:0001836 P release of cytochrome c from mitochondria
GO:0003839 F gamma-glutamylcyclotransferase activity
GO:0005829 C cytosol
GO:0006750 P glutathione biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0042803 F protein homodimerization activity
GO:0070062 C extracellular exosome
FPKM:14.53 TPM:13.45
6358 A_BomaMG_comp16039_c0_seq2
783bp
PREDICTED:_gamma-glutamylcyclotransferase-like_[Papilio_machaon]
GO:0001836 P release of cytochrome c from mitochondria
GO:0003839 F gamma-glutamylcyclotransferase activity
GO:0005829 C cytosol
GO:0006750 P glutathione biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0042803 F protein homodimerization activity
GO:0070062 C extracellular exosome
FPKM:2.05 TPM:1.90
6359 A_BomaMG_comp16040_c0_seq1
930bp
PREDICTED:_angiomotin-like_[Bombyx_mori]
FPKM:1.58 TPM:1.47
6360 A_BomaMG_comp160413_c0_seq1
1154bp
PREDICTED:_synaptic_vesicle_glycoprotein_2A_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0007268 P chemical synaptic transmission
GO:0008021 C synaptic vesicle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0030054 C cell junction
GO:0030672 C synaptic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0055085 P transmembrane transport
FPKM:1.88 TPM:1.74
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