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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6271 A_BomaMG_comp159791_c0_seq1
310bp
PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_3_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0000301 P retrograde transport, vesicle recycling within Golgi
GO:0005794 C Golgi apparatus
GO:0005801 C cis-Golgi network
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0007112 P male meiosis cytokinesis
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0022008 P neurogenesis
GO:0033227 P dsRNA transport
FPKM:4.19 TPM:3.88
6272 A_BomaMG_comp159792_c0_seq1
879bp
putative_outer_membrane_protein_[Pseudomonas_fluorescens_SBW25]
FPKM:1.55 TPM:1.44
6273 A_BomaMG_comp159799_c0_seq1
422bp
FPKM:2.11 TPM:1.96
6274 A_BomaMG_comp1597_c0_seq1
536bp
cyclin_dependent_kinase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0001726 C ruffle
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003323 P type B pancreatic cell development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007219 P Notch signaling pathway
GO:0009615 P response to virus
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0030332 F cyclin binding
GO:0033077 P T cell differentiation in thymus
GO:0042063 P gliogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042995 C cell projection
GO:0043697 P cell dedifferentiation
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045786 P negative regulation of cell cycle
GO:0048146 P positive regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051301 P cell division
GO:0060218 P hematopoietic stem cell differentiation
GO:2000773 P negative regulation of cellular senescence
FPKM:1.05 TPM:0.97
6275 A_BomaMG_comp1597_c1_seq1
302bp
cyclin_dependent_kinase_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000307 C cyclin-dependent protein kinase holoenzyme complex
GO:0001726 C ruffle
GO:0001954 P positive regulation of cell-matrix adhesion
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003323 P type B pancreatic cell development
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006468 P protein phosphorylation
GO:0007049 P cell cycle
GO:0007219 P Notch signaling pathway
GO:0009615 P response to virus
GO:0010468 P regulation of gene expression
GO:0010628 P positive regulation of gene expression
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0030332 F cyclin binding
GO:0033077 P T cell differentiation in thymus
GO:0042063 P gliogenesis
GO:0042127 P regulation of cell population proliferation
GO:0042995 C cell projection
GO:0043697 P cell dedifferentiation
GO:0045638 P negative regulation of myeloid cell differentiation
GO:0045646 P regulation of erythrocyte differentiation
GO:0045668 P negative regulation of osteoblast differentiation
GO:0045786 P negative regulation of cell cycle
GO:0048146 P positive regulation of fibroblast proliferation
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0051301 P cell division
GO:0060218 P hematopoietic stem cell differentiation
GO:2000773 P negative regulation of cellular senescence
FPKM:1.11 TPM:1.03
6276 A_BomaMG_comp159804_c0_seq1
313bp
PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0007155 P cell adhesion
GO:0008092 F cytoskeletal protein binding
GO:0016322 P neuron remodeling
GO:0016601 P Rac protein signal transduction
GO:0019898 C extrinsic component of membrane
GO:0030316 P osteoclast differentiation
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031532 P actin cytoskeleton reorganization
GO:0033623 P regulation of integrin activation
GO:0035023 P regulation of Rho protein signal transduction
GO:0043547 P positive regulation of GTPase activity
GO:0071526 P semaphorin-plexin signaling pathway
GO:0071800 P podosome assembly
FPKM:3.07 TPM:2.84
6277 A_BomaMG_comp159805_c0_seq1
380bp
PREDICTED:_tubulin_polyglutamylase_TTLL4-like_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0006464 P cellular protein modification process
GO:0015631 F tubulin binding
GO:0016874 F ligase activity
GO:0018095 P protein polyglutamylation
GO:0018200 P peptidyl-glutamic acid modification
GO:0042995 C cell projection
GO:0070739 F protein-glutamic acid ligase activity
FPKM:2.90 TPM:2.69
6278 A_BomaMG_comp15980_c0_seq1
1023bp
PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX33_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000182 F rDNA binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0033613 F DNA-binding transcription factor binding
GO:0044822 F RNA binding
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:1.57 TPM:1.45
6279 A_BomaMG_comp15981_c0_seq1
449bp
PREDICTED:_unconventional_myosin-Va_[Bombyx_mori]
GO:0000146 F microfilament motor activity
GO:0000166 F nucleotide binding
GO:0003091 P renal water homeostasis
GO:0003774 F cytoskeletal motor activity
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016459 C myosin complex
GO:0017137 F small GTPase binding
GO:0030659 C cytoplasmic vesicle membrane
GO:0032439 P endosomal transport
GO:0043234 C protein-containing complex
GO:0045179 C apical cortex
GO:0055037 C recycling endosome
GO:0070062 C extracellular exosome
FPKM:2.28 TPM:2.11
6280 A_BomaMG_comp159821_c0_seq1
847bp
PREDICTED:_proline-,_glutamic_acid-_and_leucine-rich_protein_1-like_[Plutella_xylostella]
FPKM:1.88 TPM:1.74
6281 A_BomaMG_comp159835_c0_seq1
880bp
PREDICTED:_mitotic_spindle_assembly_checkpoint_protein_MAD2B_[Plutella_xylostella]
GO:0001558 P regulation of cell growth
GO:0005634 C nucleus
GO:0005680 C anaphase-promoting complex
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006302 P double-strand break repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008432 F JUN kinase binding
GO:0016035 C zeta DNA polymerase complex
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042177 P negative regulation of protein catabolic process
GO:0042772 P DNA damage response, signal transduction resulting in transcription
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0051301 P cell division
GO:0060564 P negative regulation of ubiquitin protein ligase activity
FPKM:1.79 TPM:1.66
6282 A_BomaMG_comp159847_c0_seq1
319bp
FPKM:3.43 TPM:3.18
6283 A_BomaMG_comp15984_c0_seq1
703bp
PREDICTED:_deoxynucleoside_kinase-like_isoform_X1_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
FPKM:2.66 TPM:2.47
6284 A_BomaMG_comp15985_c0_seq1
348bp
clp_protease_proteolytic_subunit_[Ravenala_madagascariensis]
FPKM:1.42 TPM:1.32
6285 A_BomaMG_comp159872_c0_seq1
208bp
FPKM:2.72 TPM:2.52
6286 A_BomaMG_comp15987_c0_seq1
595bp
PREDICTED:_tyrosine-protein_kinase_Btk29A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007254 P JNK cascade
GO:0007300 P ovarian nurse cell to oocyte transport
GO:0007301 P female germline ring canal formation
GO:0007349 P cellularization
GO:0007391 P dorsal closure
GO:0007424 P open tracheal system development
GO:0007435 P salivary gland morphogenesis
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007485 P imaginal disc-derived male genitalia development
GO:0007619 P courtship behavior
GO:0008258 P head involution
GO:0008340 P determination of adult lifespan
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030036 P actin cytoskeleton organization
GO:0030717 P oocyte karyosome formation
GO:0030723 P ovarian fusome organization
GO:0030833 P regulation of actin filament polymerization
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035277 P spiracle morphogenesis, open tracheal system
GO:0035556 P intracellular signal transduction
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042023 P DNA endoreduplication
GO:0042127 P regulation of cell population proliferation
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045087 P innate immune response
GO:0045172 C germline ring canal
GO:0045177 C apical part of cell
GO:0046872 F metal ion binding
GO:0046960 P sensitization
GO:0048477 P oogenesis
GO:0071944 C cell periphery
FPKM:1.88 TPM:1.75
6287 A_BomaMG_comp159894_c0_seq1
653bp
PREDICTED:_WD_repeat-containing_protein_81_isoform_X3_[Bombyx_mori]
GO:0000132 P establishment of mitotic spindle orientation
GO:0000776 C kinetochore
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005938 C cell cortex
GO:0007097 P nuclear migration
GO:0007281 P germ cell development
GO:0008017 F microtubule binding
GO:0008090 P retrograde axonal transport
GO:0010923 P negative regulation of phosphatase activity
GO:0022008 P neurogenesis
GO:0031023 P microtubule organizing center organization
GO:0045502 F dynein complex binding
GO:0047496 P vesicle transport along microtubule
GO:1904115 C axon cytoplasm
GO:2000574 P obsolete regulation of microtubule motor activity
FPKM:2.23 TPM:2.06
6288 A_BomaMG_comp1598_c0_seq1
236bp
FPKM:1.68 TPM:1.56
6289 A_BomaMG_comp159900_c0_seq1
286bp
FPKM:1.59 TPM:1.47
6290 A_BomaMG_comp159912_c0_seq1
300bp
PREDICTED:_uncharacterized_protein_LOC101736185,_partial_[Bombyx_mori]
FPKM:3.68 TPM:3.40
6291 A_BomaMG_comp15991_c0_seq1
213bp
FPKM:1.64 TPM:1.52
6292 A_BomaMG_comp15991_c1_seq1
710bp
FPKM:1.28 TPM:1.19
6293 A_BomaMG_comp159939_c0_seq1
1041bp
FPKM:1.50 TPM:1.39
6294 A_BomaMG_comp15993_c0_seq1
345bp
ATP-dependent_DNA_helicase_[Lactobacillus_xiangfangensis]
FPKM:1.86 TPM:1.72
6295 A_BomaMG_comp159940_c0_seq1
387bp
FPKM:1.81 TPM:1.68
6296 A_BomaMG_comp159945_c0_seq1
221bp
FPKM:0.00 TPM:0.00
6297 A_BomaMG_comp159951_c0_seq1
758bp
PREDICTED:_uncharacterized_protein_LOC101742555_isoform_X2_[Bombyx_mori]
GO:0002376 P immune system process
GO:0005887 C integral component of plasma membrane
GO:0006952 P defense response
GO:0008270 F zinc ion binding
GO:0008340 P determination of adult lifespan
GO:0008745 F N-acetylmuramoyl-L-alanine amidase activity
GO:0009253 P peptidoglycan catabolic process
GO:0009617 P response to bacterium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019731 P antibacterial humoral response
GO:0031240 C external side of cell outer membrane
GO:0042834 F peptidoglycan binding
GO:0045087 P innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0061057 P peptidoglycan recognition protein signaling pathway
GO:0098542 P defense response to other organism
FPKM:1.59 TPM:1.47
6298 A_BomaMG_comp15996_c0_seq1
602bp
FPKM:4.03 TPM:3.73
6299 A_BomaMG_comp159991_c0_seq1
207bp
DNA_repair_protein_(mre11)_[Capronia_semiimmersa]
FPKM:4.63 TPM:4.29
6300 A_BomaMG_comp1599_c0_seq1
307bp
FPKM:0.80 TPM:0.74
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