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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6241 A_BomaMG_comp159572_c0_seq1
250bp
PREDICTED:_kelch-like_protein_12_isoform_X2_[Papilio_polytes]
FPKM:4.65 TPM:4.31
6242 A_BomaMG_comp15957_c0_seq1
1227bp
PREDICTED:_disheveled-associated_activator_of_morphogenesis_1_isoform_X3_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
FPKM:2.23 TPM:2.07
6243 A_BomaMG_comp15957_c1_seq1
406bp
PREDICTED:_disheveled-associated_activator_of_morphogenesis_1_isoform_X2_[Bombyx_mori]
GO:0001725 C stress fiber
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0042802 F identical protein binding
FPKM:2.57 TPM:2.38
6244 A_BomaMG_comp159589_c0_seq1
1407bp
PREDICTED:_polycomb_group_RING_finger_protein_3_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0031519 C PcG protein complex
GO:0046872 F metal ion binding
FPKM:2.02 TPM:1.87
6245 A_BomaMG_comp159590_c0_seq1
261bp
FPKM:1.23 TPM:1.13
6246 A_BomaMG_comp159591_c0_seq1
486bp
unknown_protein_[Oryza_sativa_Japonica_Group]
FPKM:1.78 TPM:1.65
6247 A_BomaMG_comp15959_c0_seq1
966bp
PREDICTED:_tryptophan_2,3-dioxygenase_isoform_X2_[Bombyx_mori]
GO:0004833 F tryptophan 2,3-dioxygenase activity
GO:0006569 P tryptophan catabolic process
GO:0016491 F oxidoreductase activity
GO:0019441 P tryptophan catabolic process to kynurenine
GO:0020037 F heme binding
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.07 TPM:1.92
6248 A_BomaMG_comp15960_c0_seq1
508bp
FPKM:1.25 TPM:1.15
6249 A_BomaMG_comp15961_c0_seq1
205bp
FPKM:0.00 TPM:0.00
6250 A_BomaMG_comp159634_c0_seq1
497bp
FPKM:2.15 TPM:1.99
6251 A_BomaMG_comp159637_c0_seq1
447bp
Vanillate_O-demethylase_oxidoreductase_[Pseudomonas_putida]
FPKM:1.79 TPM:1.66
6252 A_BomaMG_comp15963_c0_seq1
481bp
PREDICTED:_fatty_acid_synthase-like_[Amyelois_transitella]
FPKM:6.68 TPM:6.18
6253 A_BomaMG_comp15965_c0_seq1
278bp
FPKM:0.34 TPM:0.32
6254 A_BomaMG_comp159665_c0_seq1
904bp
FPKM:1.69 TPM:1.56
6255 A_BomaMG_comp15966_c0_seq1
619bp
FPKM:2.63 TPM:2.44
6256 A_BomaMG_comp15967_c0_seq1
719bp
hypothetical_protein_KGM_20561_[Danaus_plexippus]
GO:0005280 F amino acid:proton symporter activity
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006865 P amino acid transport
GO:0015078 F proton transmembrane transporter activity
GO:0015171 F amino acid transmembrane transporter activity
GO:0015175 F neutral amino acid transmembrane transporter activity
GO:0015180 F L-alanine transmembrane transporter activity
GO:0015187 F glycine transmembrane transporter activity
GO:0015193 F L-proline transmembrane transporter activity
GO:0015293 F symporter activity
GO:0015804 P neutral amino acid transport
GO:0015808 P L-alanine transport
GO:0015816 P glycine transport
GO:0015824 P proline transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035524 P proline transmembrane transport
GO:1902600 P proton transmembrane transport
FPKM:1.20 TPM:1.11
6257 A_BomaMG_comp15967_c1_seq1
581bp
PREDICTED:_proton-coupled_amino_acid_transporter_4_[Amyelois_transitella]
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015293 F symporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:1.70 TPM:1.57
6258 A_BomaMG_comp15968_c0_seq1
278bp
FPKM:3.42 TPM:3.16
6259 A_BomaMG_comp15969_c0_seq1
231bp
FPKM:3.02 TPM:2.80
6260 A_BomaMG_comp15971_c0_seq1
678bp
PREDICTED:_peptidyl-prolyl_cis-trans_isomerase_H_[Amyelois_transitella]
GO:0000398 P mRNA splicing, via spliceosome
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006457 P protein folding
GO:0006461 P protein-containing complex assembly
GO:0008380 P RNA splicing
GO:0016018 F cyclosporin A binding
GO:0016607 C nuclear speck
GO:0016853 F isomerase activity
GO:0043021 F ribonucleoprotein complex binding
GO:0045070 P positive regulation of viral genome replication
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0071001 C U4/U6 snRNP
FPKM:7.91 TPM:7.33
6261 A_BomaMG_comp159729_c0_seq1
318bp
cobalt_ABC_transporter_[Bifidobacterium_moukalabense]
FPKM:2.71 TPM:2.51
6262 A_BomaMG_comp15972_c0_seq1
606bp
FPKM:1.68 TPM:1.55
6263 A_BomaMG_comp15973_c0_seq1
739bp
calcium_and_integrin_binding_protein_CIB_[Bombyx_mori]
GO:0001525 P angiogenesis
GO:0005509 F calcium ion binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007155 P cell adhesion
GO:0007229 P integrin-mediated signaling pathway
GO:0007283 P spermatogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0030027 C lamellipodium
GO:0030154 P cell differentiation
GO:0030426 C growth cone
GO:0032433 C filopodium tip
GO:0032587 C ruffle membrane
GO:0042383 C sarcolemma
GO:0042995 C cell projection
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
FPKM:2.00 TPM:1.86
6264 A_BomaMG_comp159751_c0_seq1
431bp
FPKM:2.17 TPM:2.01
6265 A_BomaMG_comp15975_c0_seq1
896bp
PREDICTED:_ATP-dependent_zinc_metalloprotease_FTSH_6,_chloroplastic-like_[Citrus_sinensis]
FPKM:1.71 TPM:1.58
6266 A_BomaMG_comp15976_c0_seq1
378bp
PREDICTED:_LOW_QUALITY_PROTEIN:_gastrula_zinc_finger_protein_XlCGF49.1-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000981 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0015629 C actin cytoskeleton
GO:0042803 F protein homodimerization activity
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.72 TPM:1.60
6267 A_BomaMG_comp15976_c1_seq1
759bp
PREDICTED:_LOW_QUALITY_PROTEIN:_gastrula_zinc_finger_protein_XlCGF49.1-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:1.47 TPM:1.36
6268 A_BomaMG_comp15977_c0_seq1
347bp
NAD_metabolism_ATPase/kinase_[Gillisia_sp._Hel_I_29]
FPKM:2.25 TPM:2.08
6269 A_BomaMG_comp15977_c1_seq1
321bp
FPKM:1.69 TPM:1.57
6270 A_BomaMG_comp159781_c0_seq1
575bp
hypothetical_protein_[Yersinia_pseudotuberculosis]
FPKM:1.21 TPM:1.12
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