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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6181 A_BomaMG_comp15903_c0_seq1
944bp
cyclin_J_[Danaus_plexippus]
GO:0005634 C nucleus
FPKM:1.91 TPM:1.77
6182 A_BomaMG_comp15905_c0_seq1
1029bp
PREDICTED:_tonsoku-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.80 TPM:1.66
6183 A_BomaMG_comp15905_c1_seq1
543bp
Uncharacterized_protein_OBRU01_23738,_partial_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:1.03 TPM:0.95
6184 A_BomaMG_comp15907_c0_seq1
239bp
PREDICTED:_uncharacterized_protein_LOC105841441_[Bombyx_mori]
FPKM:0.54 TPM:0.50
6185 A_BomaMG_comp15907_c0_seq2
231bp
PREDICTED:_transcription_initiation_factor_TFIID_subunit_4-like,_partial_[Bombyx_mori]
FPKM:2.42 TPM:2.24
6186 A_BomaMG_comp15908_c0_seq1
413bp
FPKM:2.49 TPM:2.31
6187 A_BomaMG_comp1590_c0_seq1
217bp
PREDICTED:_midasin_isoform_X2_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:0.76 TPM:0.71
6188 A_BomaMG_comp15910_c0_seq1
551bp
ring_finger,_membrane_associated,_possible_signal_peptide_[Cryptosporidium_parvum_Iowa_II]
FPKM:1.56 TPM:1.44
6189 A_BomaMG_comp15911_c0_seq1
264bp
TIGR04255_family_protein_[Cyanothece_sp._PCC_7822]
FPKM:5.14 TPM:4.76
6190 A_BomaMG_comp15915_c0_seq1
913bp
FPKM:1.62 TPM:1.50
6191 A_BomaMG_comp15916_c0_seq1
931bp
FPKM:1.99 TPM:1.84
6192 A_BomaMG_comp15918_c0_seq1
670bp
extra_sex_combs_[Bombyx_mori]
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0042802 F identical protein binding
GO:0045120 C pronucleus
GO:0061087 P positive regulation of histone H3-K27 methylation
FPKM:1.87 TPM:1.73
6193 A_BomaMG_comp15918_c1_seq1
652bp
extra_sex_combs_[Bombyx_mori]
GO:0001739 C sex chromatin
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0035098 C ESC/E(Z) complex
GO:0042054 F histone methyltransferase activity
GO:0042802 F identical protein binding
GO:0045120 C pronucleus
GO:0061087 P positive regulation of histone H3-K27 methylation
FPKM:1.37 TPM:1.27
6194 A_BomaMG_comp159190_c0_seq1
230bp
FPKM:0.00 TPM:0.00
6195 A_BomaMG_comp1591_c0_seq1
296bp
FPKM:1.17 TPM:1.08
6196 A_BomaMG_comp15920_c0_seq1
373bp
hypothetical_protein_[Escherichia_coli]
FPKM:3.36 TPM:3.11
6197 A_BomaMG_comp15921_c0_seq1
221bp
unnamed_protein_product_[Albugo_candida]
FPKM:2.84 TPM:2.63
6198 A_BomaMG_comp15922_c0_seq1
941bp
PREDICTED:_zinc_finger_protein_836-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000278 P mitotic cell cycle
GO:0000976 F transcription cis-regulatory region binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051567 P histone H3-K9 methylation
GO:0070491 F DNA-binding transcription factor binding
FPKM:1.74 TPM:1.61
6199 A_BomaMG_comp159235_c0_seq1
516bp
FPKM:2.03 TPM:1.88
6200 A_BomaMG_comp15923_c0_seq1
246bp
PREDICTED:_protein_phosphatase_Slingshot_[Bombyx_mori]
FPKM:3.92 TPM:3.63
6201 A_BomaMG_comp15924_c0_seq1
681bp
FPKM:1.83 TPM:1.70
6202 A_BomaMG_comp15925_c0_seq1
554bp
PREDICTED:_uncharacterized_protein_LOC101746464_[Bombyx_mori]
FPKM:2.00 TPM:1.85
6203 A_BomaMG_comp15925_c1_seq1
909bp
PREDICTED:_uncharacterized_protein_LOC101746464_[Bombyx_mori]
FPKM:1.35 TPM:1.25
6204 A_BomaMG_comp15926_c0_seq1
651bp
odorant_receptor_19_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004984 F olfactory receptor activity
GO:0005549 F odorant binding
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007608 P sensory perception of smell
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032590 C dendrite membrane
GO:0050896 P response to stimulus
GO:0050911 P detection of chemical stimulus involved in sensory perception of smell
FPKM:1.88 TPM:1.74
6205 A_BomaMG_comp15926_c1_seq1
326bp
olfactory_receptor_19_[Bombyx_mori]
FPKM:1.87 TPM:1.73
6206 A_BomaMG_comp159271_c0_seq1
392bp
Splicing_factor_3A_subunit_1_[Papilio_xuthus]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000389 P mRNA 3'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
GO:0071013 C catalytic step 2 spliceosome
FPKM:2.90 TPM:2.68
6207 A_BomaMG_comp15928_c0_seq1
443bp
PREDICTED:_LOW_QUALITY_PROTEIN:_partitioning_defective_3_homolog_[Bombyx_mori]
FPKM:2.46 TPM:2.28
6208 A_BomaMG_comp15931_c0_seq1
503bp
conserved_hypothetical_protein_[Perkinsus_marinus_ATCC_50983]
FPKM:2.21 TPM:2.05
6209 A_BomaMG_comp15933_c0_seq1
375bp
FPKM:2.28 TPM:2.11
6210 A_BomaMG_comp159344_c0_seq1
1494bp
PREDICTED:_probable_cation-transporting_ATPase_13A3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006457 P protein folding
GO:0006812 P cation transport
GO:0006874 P cellular calcium ion homeostasis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0016787 F hydrolase activity
GO:0016887 F ATP hydrolysis activity
GO:0019829 F ATPase-coupled cation transmembrane transporter activity
GO:0046872 F metal ion binding
GO:0098655 P cation transmembrane transport
FPKM:1.73 TPM:1.60
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