SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/39865
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6151 A_BomaMG_comp15879_c0_seq1
1408bp
PREDICTED:_DNA_polymerase_epsilon_subunit_2_[Plutella_xylostella]
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000722 P telomere maintenance via recombination
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006270 P DNA replication initiation
GO:0006281 P DNA repair
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042276 P error-prone translesion synthesis
GO:0043231 C intracellular membrane-bounded organelle
FPKM:1.43 TPM:1.33
6152 A_BomaMG_comp15880_c0_seq1
517bp
PREDICTED:_uncharacterized_protein_LOC105390466_[Plutella_xylostella]
FPKM:1.82 TPM:1.68
6153 A_BomaMG_comp15880_c1_seq1
208bp
PREDICTED:_uncharacterized_protein_LOC106136983_[Amyelois_transitella]
FPKM:1.82 TPM:1.68
6154 A_BomaMG_comp15881_c0_seq1
1076bp
PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005847 C mRNA cleavage and polyadenylation specificity factor complex
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0017022 F myosin binding
GO:0022008 P neurogenesis
FPKM:1.93 TPM:1.79
6155 A_BomaMG_comp15882_c0_seq1
924bp
PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
FPKM:3.44 TPM:3.19
6156 A_BomaMG_comp15882_c0_seq2
552bp
PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
FPKM:3.52 TPM:3.26
6157 A_BomaMG_comp15883_c0_seq1
529bp
PREDICTED:_diacylglycerol_kinase_epsilon_isoform_X2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:1.76 TPM:1.63
6158 A_BomaMG_comp15883_c0_seq2
277bp
PREDICTED:_diacylglycerol_kinase_epsilon_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004143 F diacylglycerol kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007205 P protein kinase C-activating G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
FPKM:0.00 TPM:0.00
6159 A_BomaMG_comp15886_c0_seq1
451bp
FPKM:2.01 TPM:1.86
6160 A_BomaMG_comp15887_c0_seq1
330bp
PREDICTED:_LOW_QUALITY_PROTEIN:_CD109_antigen-like,_partial_[Bombyx_mori]
GO:0001933 P negative regulation of protein phosphorylation
GO:0001942 P hair follicle development
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0009986 C cell surface
GO:0010466 P negative regulation of peptidase activity
GO:0010839 P negative regulation of keratinocyte proliferation
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031225 C anchored component of membrane
GO:0045616 P regulation of keratinocyte differentiation
GO:0050431 F transforming growth factor beta binding
GO:0061045 P negative regulation of wound healing
GO:0072675 P osteoclast fusion
FPKM:1.36 TPM:1.26
6161 A_BomaMG_comp15887_c1_seq1
386bp
PREDICTED:_LOW_QUALITY_PROTEIN:_CD109_antigen-like,_partial_[Bombyx_mori]
GO:0004866 F endopeptidase inhibitor activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005886 C plasma membrane
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0030414 F peptidase inhibitor activity
FPKM:2.32 TPM:2.15
6162 A_BomaMG_comp15889_c0_seq1
313bp
carotenoid_oxygenase_[Gloeobacter_kilaueensis]
FPKM:2.30 TPM:2.13
6163 A_BomaMG_comp15892_c0_seq1
288bp
hypothetical_protein_RR48_04816_[Papilio_machaon]
FPKM:5.01 TPM:4.64
6164 A_BomaMG_comp15893_c0_seq1
610bp
PREDICTED:_histone_deacetylase_6_isoform_X1_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000209 P protein polyubiquitination
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003779 F actin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005881 C cytoplasmic microtubule
GO:0005901 C caveola
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006886 P intracellular protein transport
GO:0007026 P negative regulation of microtubule depolymerization
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0009636 P response to toxic substance
GO:0009967 P positive regulation of signal transduction
GO:0010033 P response to organic substance
GO:0010469 P regulation of signaling receptor activity
GO:0010634 P positive regulation of epithelial cell migration
GO:0010870 P obsolete positive regulation of receptor biosynthetic process
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0030286 C dynein complex
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032418 P lysosome localization
GO:0034983 P peptidyl-lysine deacetylation
GO:0035967 P cellular response to topologically incorrect protein
GO:0040029 P regulation of gene expression, epigenetic
GO:0042826 F histone deacetylase binding
GO:0042903 F tubulin deacetylase activity
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043014 F alpha-tubulin binding
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043204 C perikaryon
GO:0043234 C protein-containing complex
GO:0043241 P protein-containing complex disassembly
GO:0043242 P negative regulation of protein-containing complex disassembly
GO:0044297 C cell body
GO:0045598 P regulation of fat cell differentiation
GO:0045861 P negative regulation of proteolysis
GO:0046872 F metal ion binding
GO:0048156 F tau protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0048668 P collateral sprouting
GO:0051646 P mitochondrion localization
GO:0051787 F misfolded protein binding
GO:0051788 P response to misfolded protein
GO:0051879 F Hsp90 protein binding
GO:0060997 P dendritic spine morphogenesis
GO:0070201 P regulation of establishment of protein localization
GO:0070301 P cellular response to hydrogen peroxide
GO:0070840 F dynein complex binding
GO:0070842 P aggresome assembly
GO:0070845 P polyubiquitinated misfolded protein transport
GO:0070846 P Hsp90 deacetylation
GO:0070848 P response to growth factor
GO:0070932 P histone H3 deacetylation
GO:0071218 P cellular response to misfolded protein
GO:0090035 P positive regulation of chaperone-mediated protein complex assembly
GO:0090042 P tubulin deacetylation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901300 P positive regulation of hydrogen peroxide-mediated programmed cell death
FPKM:2.13 TPM:1.98
6165 A_BomaMG_comp15893_c1_seq1
549bp
PREDICTED:_histone_deacetylase_6_isoform_X2_[Bombyx_mori]
GO:0000118 C histone deacetylase complex
GO:0000209 P protein polyubiquitination
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003779 F actin binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005771 C multivesicular body
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005881 C cytoplasmic microtubule
GO:0005901 C caveola
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006476 P protein deacetylation
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006515 P protein quality control for misfolded or incompletely synthesized proteins
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0006996 P organelle organization
GO:0007026 P negative regulation of microtubule depolymerization
GO:0008013 F beta-catenin binding
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0009636 P response to toxic substance
GO:0009967 P positive regulation of signal transduction
GO:0010033 P response to organic substance
GO:0010469 P regulation of signaling receptor activity
GO:0010506 P regulation of autophagy
GO:0010634 P positive regulation of epithelial cell migration
GO:0010727 P negative regulation of hydrogen peroxide metabolic process
GO:0010870 P obsolete positive regulation of receptor biosynthetic process
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0019899 F enzyme binding
GO:0030286 C dynein complex
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031252 C cell leading edge
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0031625 F ubiquitin protein ligase binding
GO:0031647 P regulation of protein stability
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032418 P lysosome localization
GO:0034983 P peptidyl-lysine deacetylation
GO:0035967 P cellular response to topologically incorrect protein
GO:0040029 P regulation of gene expression, epigenetic
GO:0042826 F histone deacetylase binding
GO:0042903 F tubulin deacetylase activity
GO:0042995 C cell projection
GO:0043014 F alpha-tubulin binding
GO:0043130 F ubiquitin binding
GO:0043162 P ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043204 C perikaryon
GO:0043234 C protein-containing complex
GO:0043241 P protein-containing complex disassembly
GO:0043242 P negative regulation of protein-containing complex disassembly
GO:0045598 P regulation of fat cell differentiation
GO:0045861 P negative regulation of proteolysis
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048156 F tau protein binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0051354 P negative regulation of oxidoreductase activity
GO:0051646 P mitochondrion localization
GO:0051787 F misfolded protein binding
GO:0051788 P response to misfolded protein
GO:0051879 F Hsp90 protein binding
GO:0060632 P regulation of microtubule-based movement
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0070201 P regulation of establishment of protein localization
GO:0070301 P cellular response to hydrogen peroxide
GO:0070840 F dynein complex binding
GO:0070842 P aggresome assembly
GO:0070845 P polyubiquitinated misfolded protein transport
GO:0070846 P Hsp90 deacetylation
GO:0070848 P response to growth factor
GO:0070932 P histone H3 deacetylation
GO:0071218 P cellular response to misfolded protein
GO:0090035 P positive regulation of chaperone-mediated protein complex assembly
GO:0090042 P tubulin deacetylation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901300 P positive regulation of hydrogen peroxide-mediated programmed cell death
GO:1903146 P regulation of autophagy of mitochondrion
FPKM:1.66 TPM:1.54
6166 A_BomaMG_comp15894_c0_seq1
332bp
mating-type_switching_protein_swi10_[Ustilaginoidea_virens]
FPKM:2.92 TPM:2.70
6167 A_BomaMG_comp15894_c1_seq1
1476bp
PREDICTED:_uncharacterized_protein_LOC106105275_[Papilio_polytes]
FPKM:2.82 TPM:2.61
6168 A_BomaMG_comp158952_c0_seq1
501bp
FPKM:1.38 TPM:1.28
6169 A_BomaMG_comp15895_c0_seq1
265bp
FPKM:1.57 TPM:1.45
6170 A_BomaMG_comp15895_c1_seq1
494bp
PREDICTED:_CAS1_domain-containing_protein_1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:1.63 TPM:1.51
6171 A_BomaMG_comp15896_c0_seq1
380bp
phosphoribosylglycinamide_formyltransferase_[Salinispira_pacifica]
FPKM:2.05 TPM:1.90
6172 A_BomaMG_comp15897_c0_seq1
539bp
PREDICTED:_deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050776 P regulation of immune response
GO:2000026 P regulation of multicellular organismal development
FPKM:1.90 TPM:1.76
6173 A_BomaMG_comp15898_c0_seq1
615bp
PREDICTED:_zinc_finger_protein_391-like_isoform_X3_[Bombyx_mori]
GO:0002168 P instar larval development
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0045998 P positive regulation of ecdysteroid biosynthetic process
GO:0046872 F metal ion binding
FPKM:2.11 TPM:1.95
6174 A_BomaMG_comp15898_c1_seq1
235bp
PREDICTED:_zinc_finger_protein_391-like_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000792 C heterochromatin
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0001657 P ureteric bud development
GO:0001658 P branching involved in ureteric bud morphogenesis
GO:0001822 P kidney development
GO:0003281 P ventricular septum development
GO:0003337 P mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007507 P heart development
GO:0008013 F beta-catenin binding
GO:0008406 P gonad development
GO:0010369 C chromocenter
GO:0016575 P histone deacetylation
GO:0016581 C NuRD complex
GO:0021553 P olfactory nerve development
GO:0021889 P olfactory bulb interneuron differentiation
GO:0021983 P pituitary gland development
GO:0022008 P neurogenesis
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0030325 P adrenal gland development
GO:0031129 P inductive cell-cell signaling
GO:0035019 P somatic stem cell population maintenance
GO:0042473 P outer ear morphogenesis
GO:0042733 P embryonic digit morphogenesis
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048566 P embryonic digestive tract development
GO:0060173 P limb development
GO:0061034 P olfactory bulb mitral cell layer development
GO:0072073 P kidney epithelium development
GO:0072092 P ureteric bud invasion
FPKM:2.85 TPM:2.64
6175 A_BomaMG_comp15899_c0_seq1
343bp
PREDICTED:_Bloom_syndrome_protein_homolog_isoform_X1_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000405 F bubble DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000729 P DNA double-strand break processing
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000733 P obsolete DNA strand renaturation
GO:0000781 C chromosome, telomeric region
GO:0000800 C lateral element
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0010165 P response to X-ray
GO:0016363 C nuclear matrix
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0016925 P protein sumoylation
GO:0031297 P replication fork processing
GO:0032508 P DNA duplex unwinding
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0043140 F 3'-5' DNA helicase activity
GO:0044237 P cellular metabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045910 P negative regulation of DNA recombination
GO:0048478 P replication fork protection
GO:0051259 P protein complex oligomerization
GO:0051782 P negative regulation of cell division
GO:0051880 F G-quadruplex DNA binding
GO:0071479 P cellular response to ionizing radiation
GO:0072711 P cellular response to hydroxyurea
GO:0072757 P cellular response to camptothecin
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:1.89 TPM:1.75
6176 A_BomaMG_comp15899_c0_seq2
324bp
PREDICTED:_Bloom_syndrome_protein_homolog_isoform_X1_[Bombyx_mori]
GO:0000079 P regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000405 F bubble DNA binding
GO:0000724 P double-strand break repair via homologous recombination
GO:0000729 P DNA double-strand break processing
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000732 P strand displacement
GO:0000733 P obsolete DNA strand renaturation
GO:0000781 C chromosome, telomeric region
GO:0000800 C lateral element
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008026 F helicase activity
GO:0009378 F four-way junction helicase activity
GO:0010165 P response to X-ray
GO:0016363 C nuclear matrix
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0016925 P protein sumoylation
GO:0031297 P replication fork processing
GO:0032508 P DNA duplex unwinding
GO:0036310 F ATP-dependent DNA/DNA annealing activity
GO:0043140 F 3'-5' DNA helicase activity
GO:0044237 P cellular metabolic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045910 P negative regulation of DNA recombination
GO:0048478 P replication fork protection
GO:0051259 P protein complex oligomerization
GO:0051782 P negative regulation of cell division
GO:0051880 F G-quadruplex DNA binding
GO:0071479 P cellular response to ionizing radiation
GO:0072711 P cellular response to hydroxyurea
GO:0072757 P cellular response to camptothecin
GO:1901796 P regulation of signal transduction by p53 class mediator
FPKM:0.47 TPM:0.43
6177 A_BomaMG_comp1589_c0_seq1
358bp
FPKM:1.15 TPM:1.07
6178 A_BomaMG_comp15900_c0_seq1
238bp
hypothetical_protein_PRIPAC_6479_[Pristionchus_pacificus]
FPKM:2.73 TPM:2.53
6179 A_BomaMG_comp15901_c0_seq1
716bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_50_[Amyelois_transitella]
FPKM:1.52 TPM:1.40
6180 A_BomaMG_comp15902_c0_seq1
513bp
PREDICTED:_THO_complex_subunit_3,_partial_[Plutella_xylostella]
GO:0000346 C transcription export complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031124 P mRNA 3'-end processing
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
FPKM:2.15 TPM:1.99
previous next from show/39865

- SilkBase 1999-2023 -