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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6121 A_BomaMG_comp15858_c0_seq1
216bp
FPKM:1.55 TPM:1.44
6122 A_BomaMG_comp15858_c1_seq1
868bp
NADH_dehydrogenase_subunit_F,_partial_[Royena_lucida]
FPKM:1.97 TPM:1.83
6123 A_BomaMG_comp158593_c0_seq1
583bp
Kinesin_heavy_chain_[Papilio_machaon]
FPKM:1.52 TPM:1.41
6124 A_BomaMG_comp15859_c0_seq1
843bp
FPKM:1.48 TPM:1.37
6125 A_BomaMG_comp1585_c0_seq1
423bp
FPKM:0.98 TPM:0.91
6126 A_BomaMG_comp15861_c0_seq1
296bp
FPKM:2.92 TPM:2.71
6127 A_BomaMG_comp15862_c0_seq1
417bp
PREDICTED:_spectrin_beta_chain,_non-erythrocytic_2-like_[Halyomorpha_halys]
FPKM:2.16 TPM:2.00
6128 A_BomaMG_comp15863_c0_seq1
383bp
FPKM:2.02 TPM:1.87
6129 A_BomaMG_comp15863_c1_seq1
307bp
FPKM:1.34 TPM:1.24
6130 A_BomaMG_comp15864_c0_seq1
551bp
PREDICTED:_eukaryotic_translation_initiation_factor_4E_transporter-like_[Amyelois_transitella]
FPKM:2.38 TPM:2.21
6131 A_BomaMG_comp15865_c0_seq1
387bp
PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
FPKM:2.80 TPM:2.60
6132 A_BomaMG_comp15866_c0_seq1
278bp
FPKM:4.46 TPM:4.13
6133 A_BomaMG_comp15866_c1_seq1
458bp
FPKM:1.35 TPM:1.25
6134 A_BomaMG_comp15867_c0_seq1
939bp
PREDICTED:_ubiA_prenyltransferase_domain-containing_protein_1_homolog_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0004659 F prenyltransferase activity
GO:0005739 C mitochondrion
GO:0005783 C endoplasmic reticulum
GO:0008592 P regulation of Toll signaling pathway
GO:0009234 P menaquinone biosynthetic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0031966 C mitochondrial membrane
GO:0035167 P larval lymph gland hemopoiesis
GO:0035204 P negative regulation of lamellocyte differentiation
GO:0035207 P negative regulation of hemocyte proliferation
GO:0043408 P regulation of MAPK cascade
GO:0045610 P regulation of hemocyte differentiation
GO:0046425 P regulation of receptor signaling pathway via JAK-STAT
GO:0046578 P regulation of Ras protein signal transduction
GO:0070584 P mitochondrion morphogenesis
FPKM:1.52 TPM:1.41
6135 A_BomaMG_comp158688_c0_seq1
343bp
FPKM:2.51 TPM:2.33
6136 A_BomaMG_comp15868_c0_seq1
875bp
FPKM:2.10 TPM:1.94
6137 A_BomaMG_comp1586_c0_seq1
319bp
FPKM:0.74 TPM:0.68
6138 A_BomaMG_comp15870_c0_seq1
786bp
FPKM:1.96 TPM:1.82
6139 A_BomaMG_comp15870_c1_seq1
613bp
FPKM:1.65 TPM:1.53
6140 A_BomaMG_comp15872_c0_seq1
531bp
FPKM:1.94 TPM:1.80
6141 A_BomaMG_comp158730_c0_seq1
340bp
na+driven_multidrug_efflux_pump_[Bacteroides_sp._CAG:1076]
FPKM:1.92 TPM:1.78
6142 A_BomaMG_comp158738_c0_seq1
1276bp
Uncharacterized_protein_OBRU01_18899_[Operophtera_brumata]
GO:0005506 F iron ion binding
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0008336 F gamma-butyrobetaine dioxygenase activity
GO:0016491 F oxidoreductase activity
GO:0045329 P carnitine biosynthetic process
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.48 TPM:1.37
6143 A_BomaMG_comp15874_c0_seq1
991bp
PREDICTED:_uncharacterized_protein_LOC106132309_[Amyelois_transitella]
FPKM:4.13 TPM:3.82
6144 A_BomaMG_comp15875_c0_seq1
806bp
PREDICTED:_transcriptional_adapter_2B_isoform_X2_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007412 P axon target recognition
GO:0008270 F zinc ion binding
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0035079 P polytene chromosome puffing
GO:0035222 P wing disc pattern formation
GO:0043966 P histone H3 acetylation
GO:0046872 F metal ion binding
GO:2000331 P regulation of terminal button organization
FPKM:2.01 TPM:1.86
6145 A_BomaMG_comp158761_c0_seq1
341bp
Elongation_factor_1-alpha_[Operophtera_brumata]
FPKM:1.70 TPM:1.57
6146 A_BomaMG_comp15876_c0_seq1
1025bp
PREDICTED:_uncharacterized_protein_LOC106136970_isoform_X1_[Amyelois_transitella]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
FPKM:2.01 TPM:1.86
6147 A_BomaMG_comp15876_c1_seq1
339bp
PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X3_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
FPKM:2.79 TPM:2.58
6148 A_BomaMG_comp15877_c0_seq1
665bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:2.17 TPM:2.01
6149 A_BomaMG_comp15877_c1_seq1
409bp
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_34-like_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016055 P Wnt signaling pathway
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0071108 P protein K48-linked deubiquitination
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:4.02 TPM:3.73
6150 A_BomaMG_comp15878_c0_seq1
638bp
PREDICTED:_protein_held_out_wings_isoform_X7_[Bombyx_mori]
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0007155 P cell adhesion
GO:0007275 P multicellular organism development
GO:0007284 P spermatogonial cell division
GO:0007438 P oenocyte development
GO:0007475 P apposition of dorsal and ventral imaginal disc-derived wing surfaces
GO:0007498 P mesoderm development
GO:0007517 P muscle organ development
GO:0007521 P muscle cell fate determination
GO:0007525 P somatic muscle development
GO:0008016 P regulation of heart contraction
GO:0008078 P mesodermal cell migration
GO:0008347 P glial cell migration
GO:0008366 P axon ensheathment
GO:0016203 P muscle attachment
GO:0016477 P cell migration
GO:0030154 P cell differentiation
GO:0030718 P germ-line stem cell population maintenance
GO:0045214 P sarcomere organization
GO:0045995 P regulation of embryonic development
FPKM:1.86 TPM:1.72
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