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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

6091

A_BomaMG_comp15834_c0_seq1

995bp

1-Cys_peroxiredoxin_[Bombyx_mori]

GO:0000302	P	response to reactive oxygen species
GO:0003824	F	catalytic activity
GO:0004601	F	peroxidase activity
GO:0004602	F	glutathione peroxidase activity
GO:0004623	F	phospholipase A2 activity
GO:0005615	C	extracellular space
GO:0005737	C	cytoplasm
GO:0005764	C	lysosome
GO:0005829	C	cytosol
GO:0006629	P	lipid metabolic process
GO:0006979	P	response to oxidative stress
GO:0008152	P	metabolic process
GO:0009395	P	phospholipid catabolic process
GO:0016020	C	membrane
GO:0016023	C	cytoplasmic vesicle
GO:0016042	P	lipid catabolic process
GO:0016209	F	antioxidant activity
GO:0016491	F	oxidoreductase activity
GO:0016787	F	hydrolase activity
GO:0031410	C	cytoplasmic vesicle
GO:0031625	F	ubiquitin protein ligase binding
GO:0051920	F	peroxiredoxin activity
GO:0055114	P	obsolete oxidation-reduction process
GO:0070062	C	extracellular exosome
GO:0098869	P	cellular oxidant detoxification

FPKM:16.33 TPM:15.12

6092

A_BomaMG_comp15835_c0_seq1

482bp

TFIIB-related_factor_[Bombyx_mori]

GO:0000126	C	transcription factor TFIIIB complex
GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006352	P	DNA-templated transcription, initiation
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006384	P	transcription initiation from RNA polymerase III promoter
GO:0008270	F	zinc ion binding
GO:0017025	F	TBP-class protein binding
GO:0043488	P	regulation of mRNA stability
GO:0046872	F	metal ion binding

FPKM:2.37 TPM:2.19

6093

A_BomaMG_comp15835_c1_seq1

1556bp

TFIIB-related_factor_[Bombyx_mori]

GO:0000126	C	transcription factor TFIIIB complex
GO:0003674	F	molecular_function
GO:0005575	C	cellular_component
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006352	P	DNA-templated transcription, initiation
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006384	P	transcription initiation from RNA polymerase III promoter
GO:0008270	F	zinc ion binding
GO:0017025	F	TBP-class protein binding
GO:0043488	P	regulation of mRNA stability
GO:0046872	F	metal ion binding

FPKM:1.58 TPM:1.46

6094

A_BomaMG_comp15836_c0_seq1

713bp

hypothetical_protein_KGM_16528_[Danaus_plexippus]

GO:0000166	F	nucleotide binding
GO:0000287	F	magnesium ion binding
GO:0001935	P	endothelial cell proliferation
GO:0003824	F	catalytic activity
GO:0004519	F	endonuclease activity
GO:0004521	F	endoribonuclease activity
GO:0004540	F	ribonuclease activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005637	C	nuclear inner membrane
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006379	P	mRNA cleavage
GO:0006397	P	mRNA processing
GO:0006468	P	protein phosphorylation
GO:0006915	P	apoptotic process
GO:0006986	P	response to unfolded protein
GO:0006987	P	obsolete activation of signaling protein activity involved in unfolded protein response
GO:0007050	P	regulation of cell cycle
GO:0007257	P	obsolete activation of JUN kinase activity
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016787	F	hydrolase activity
GO:0019899	F	enzyme binding
GO:0030176	C	integral component of endoplasmic reticulum membrane
GO:0030544	F	Hsp70 protein binding
GO:0030968	P	endoplasmic reticulum unfolded protein response
GO:0033120	P	positive regulation of RNA splicing
GO:0034976	P	response to endoplasmic reticulum stress
GO:0035924	P	cellular response to vascular endothelial growth factor stimulus
GO:0036289	P	peptidyl-serine autophosphorylation
GO:0036498	P	IRE1-mediated unfolded protein response
GO:0042802	F	identical protein binding
GO:0042803	F	protein homodimerization activity
GO:0043531	F	ADP binding
GO:0046777	P	protein autophosphorylation
GO:0046872	F	metal ion binding
GO:0051879	F	Hsp90 protein binding
GO:0070054	P	mRNA splicing, via endonucleolytic cleavage and ligation
GO:0070055	P	obsolete mRNA endonucleolytic cleavage involved in unfolded protein response
GO:0070059	P	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
GO:0071333	P	cellular response to glucose stimulus
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic
GO:1900103	P	positive regulation of endoplasmic reticulum unfolded protein response
GO:1901142	P	insulin metabolic process
GO:1990579	P	peptidyl-serine trans-autophosphorylation
GO:1990597	C	AIP1-IRE1 complex
GO:1990604	C	IRE1-TRAF2-ASK1 complex
GO:1990630	C	IRE1-RACK1-PP2A complex

FPKM:2.29 TPM:2.12

6095

A_BomaMG_comp158373_c0_seq1

411bp

FPKM:2.95 TPM:2.74

6096

A_BomaMG_comp15837_c0_seq1

426bp

PREDICTED:_histone_deacetylase_6_isoform_X1_[Bombyx_mori]

GO:0000118	C	histone deacetylase complex
GO:0000209	P	protein polyubiquitination
GO:0001047	F	core promoter sequence-specific DNA binding
GO:0003779	F	actin binding
GO:0004407	F	histone deacetylase activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005874	C	microtubule
GO:0005875	C	microtubule associated complex
GO:0005881	C	cytoplasmic microtubule
GO:0005901	C	caveola
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006476	P	protein deacetylation
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0006515	P	protein quality control for misfolded or incompletely synthesized proteins
GO:0006886	P	intracellular protein transport
GO:0007026	P	negative regulation of microtubule depolymerization
GO:0008013	F	beta-catenin binding
GO:0008017	F	microtubule binding
GO:0008270	F	zinc ion binding
GO:0009636	P	response to toxic substance
GO:0009967	P	positive regulation of signal transduction
GO:0010033	P	response to organic substance
GO:0010469	P	regulation of signaling receptor activity
GO:0010634	P	positive regulation of epithelial cell migration
GO:0010870	P	obsolete positive regulation of receptor biosynthetic process
GO:0016234	C	inclusion body
GO:0016235	C	aggresome
GO:0016236	P	macroautophagy
GO:0016568	P	chromatin organization
GO:0016575	P	histone deacetylation
GO:0016787	F	hydrolase activity
GO:0030286	C	dynein complex
GO:0030424	C	axon
GO:0030425	C	dendrite
GO:0031252	C	cell leading edge
GO:0031593	F	polyubiquitin modification-dependent protein binding
GO:0031625	F	ubiquitin protein ligase binding
GO:0031647	P	regulation of protein stability
GO:0032041	F	NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0032418	P	lysosome localization
GO:0034983	P	peptidyl-lysine deacetylation
GO:0035967	P	cellular response to topologically incorrect protein
GO:0040029	P	regulation of gene expression, epigenetic
GO:0042826	F	histone deacetylase binding
GO:0042903	F	tubulin deacetylase activity
GO:0042995	C	cell projection
GO:0043005	C	neuron projection
GO:0043014	F	alpha-tubulin binding
GO:0043130	F	ubiquitin binding
GO:0043162	P	ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
GO:0043204	C	perikaryon
GO:0043234	C	protein-containing complex
GO:0043241	P	protein-containing complex disassembly
GO:0043242	P	negative regulation of protein-containing complex disassembly
GO:0044297	C	cell body
GO:0045598	P	regulation of fat cell differentiation
GO:0045861	P	negative regulation of proteolysis
GO:0046872	F	metal ion binding
GO:0048156	F	tau protein binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0048487	F	beta-tubulin binding
GO:0048668	P	collateral sprouting
GO:0051646	P	mitochondrion localization
GO:0051787	F	misfolded protein binding
GO:0051788	P	response to misfolded protein
GO:0051879	F	Hsp90 protein binding
GO:0060997	P	dendritic spine morphogenesis
GO:0070201	P	regulation of establishment of protein localization
GO:0070301	P	cellular response to hydrogen peroxide
GO:0070840	F	dynein complex binding
GO:0070842	P	aggresome assembly
GO:0070845	P	polyubiquitinated misfolded protein transport
GO:0070846	P	Hsp90 deacetylation
GO:0070848	P	response to growth factor
GO:0070932	P	histone H3 deacetylation
GO:0071218	P	cellular response to misfolded protein
GO:0090035	P	positive regulation of chaperone-mediated protein complex assembly
GO:0090042	P	tubulin deacetylation
GO:0098779	P	positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901300	P	positive regulation of hydrogen peroxide-mediated programmed cell death

FPKM:2.63 TPM:2.44

6097

A_BomaMG_comp15838_c0_seq1

437bp

FPKM:2.52 TPM:2.33

6098

A_BomaMG_comp15839_c0_seq1

1078bp

PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X2_[Bombyx_mori]

FPKM:1.62 TPM:1.50

6099

A_BomaMG_comp15840_c0_seq1

1093bp

acidic_nucleoplasmic_DNA-binding_protein_1_[Bombyx_mori]

GO:0003677	F	DNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm

FPKM:1.63 TPM:1.51

6100

A_BomaMG_comp15840_c1_seq1

390bp

acidic_nucleoplasmic_DNA-binding_protein_1_[Bombyx_mori]

FPKM:1.63 TPM:1.51

6101

A_BomaMG_comp15841_c0_seq1

217bp

FPKM:3.05 TPM:2.83

6102

A_BomaMG_comp15841_c1_seq1

640bp

FPKM:1.70 TPM:1.57

6103

A_BomaMG_comp15842_c0_seq1

202bp

hypothetical_protein_AT713_00625_[Caldivirga_sp._JCHS_4]

FPKM:3.10 TPM:2.87

6104

A_BomaMG_comp15843_c0_seq1

737bp

FPKM:3.05 TPM:2.82

6105

A_BomaMG_comp15843_c1_seq1

216bp

calcium_permease_family_membrane_transporter_[Paracoccidioides_lutzii_Pb01]

FPKM:2.33 TPM:2.16

6106

A_BomaMG_comp15844_c0_seq1

213bp

FPKM:0.00 TPM:0.00

6107

A_BomaMG_comp15845_c0_seq1

887bp

PREDICTED:_uncharacterized_protein_LOC105842657,_partial_[Bombyx_mori]

FPKM:1.54 TPM:1.42

6108

A_BomaMG_comp15846_c0_seq1

511bp

PREDICTED:_uncharacterized_protein_LOC106713326_isoform_X2_[Papilio_machaon]

FPKM:2.16 TPM:2.00

6109

A_BomaMG_comp15847_c0_seq1

1029bp

hemocyte_protease-1_[Bombyx_mori]

GO:0004252	F	serine-type endopeptidase activity
GO:0005576	C	extracellular region
GO:0006508	P	proteolysis
GO:0008233	F	peptidase activity
GO:0008236	F	serine-type peptidase activity
GO:0016787	F	hydrolase activity
GO:0042381	P	hemolymph coagulation

FPKM:1.84 TPM:1.70

6110

A_BomaMG_comp15847_c1_seq1

269bp

hemocyte_protease-1_[Bombyx_mori]

FPKM:3.38 TPM:3.13

6111

A_BomaMG_comp15848_c0_seq1

418bp

FPKM:1.86 TPM:1.73

6112

A_BomaMG_comp15849_c0_seq1

649bp

FPKM:1.67 TPM:1.54

6113

A_BomaMG_comp1584_c0_seq1

240bp

FPKM:1.06 TPM:0.98

6114

A_BomaMG_comp15851_c0_seq1

1209bp

PREDICTED:_ras_GTPase-activating_protein_1_[Bombyx_mori]

GO:0000281	P	mitotic cytokinesis
GO:0001570	P	vasculogenesis
GO:0001953	P	negative regulation of cell-matrix adhesion
GO:0005096	F	GTPase activator activity
GO:0005102	F	signaling receptor binding
GO:0005737	C	cytoplasm
GO:0007162	P	negative regulation of cell adhesion
GO:0007165	P	signal transduction
GO:0009790	P	embryo development
GO:0030833	P	regulation of actin filament polymerization
GO:0031235	C	intrinsic component of the cytoplasmic side of the plasma membrane
GO:0043087	P	regulation of GTPase activity
GO:0043524	P	negative regulation of neuron apoptotic process
GO:0043547	P	positive regulation of GTPase activity
GO:0046580	P	negative regulation of Ras protein signal transduction
GO:0051020	F	GTPase binding

FPKM:1.51 TPM:1.40

6115

A_BomaMG_comp15852_c0_seq1

560bp

PREDICTED:_zinc_finger_protein_484-like_isoform_X3_[Bombyx_mori]

GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0036342	P	post-anal tail morphogenesis
GO:0043565	F	sequence-specific DNA binding
GO:0046872	F	metal ion binding
GO:0060349	P	bone morphogenesis
GO:0071407	P	cellular response to organic cyclic compound