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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

6031

A_BomaMG_comp15785_c0_seq1

776bp

FPKM:1.14 TPM:1.05

6032

A_BomaMG_comp15786_c0_seq1

454bp

FPKM:2.74 TPM:2.53

6033

A_BomaMG_comp157876_c0_seq1

317bp

FPKM:2.49 TPM:2.30

6034

A_BomaMG_comp15787_c0_seq1

410bp

FPKM:1.04 TPM:0.96

6035

A_BomaMG_comp15788_c0_seq1

859bp

FPKM:1.90 TPM:1.76

6036

A_BomaMG_comp15788_c1_seq1

619bp

FPKM:1.94 TPM:1.79

6037

A_BomaMG_comp15789_c0_seq1

253bp

FPKM:4.49 TPM:4.15

6038

A_BomaMG_comp15790_c0_seq1

414bp

FPKM:0.00 TPM:0.00

6039

A_BomaMG_comp15790_c0_seq2

455bp

FPKM:1.86 TPM:1.72

6040

A_BomaMG_comp15791_c0_seq1

1152bp

FPKM:1.53 TPM:1.42

6041

A_BomaMG_comp15794_c0_seq1

1406bp

PREDICTED:_LOW_QUALITY_PROTEIN:_circadian_locomoter_output_cycles_protein_kaput_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003053	P	circadian regulation of heart rate
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005667	C	transcription regulator complex
GO:0005737	C	cytoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007622	P	rhythmic behavior
GO:0007623	P	circadian rhythm
GO:0008062	P	eclosion rhythm
GO:0008134	F	transcription factor binding
GO:0009266	P	response to temperature stimulus
GO:0009649	P	entrainment of circadian clock
GO:0032922	P	circadian regulation of gene expression
GO:0043066	P	negative regulation of apoptotic process
GO:0045187	P	regulation of circadian sleep/wake cycle, sleep
GO:0045475	P	locomotor rhythm
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046982	F	protein heterodimerization activity
GO:0046983	F	protein dimerization activity
GO:0048148	P	behavioral response to cocaine
GO:0048511	P	rhythmic process

FPKM:2.79 TPM:2.58

6042

A_BomaMG_comp15794_c1_seq1

432bp

hypothetical_protein_[Marinifilum_fragile]

FPKM:1.90 TPM:1.75

6043

A_BomaMG_comp15795_c0_seq1

796bp

PREDICTED:_uncharacterized_protein_LOC101742281_[Bombyx_mori]

FPKM:1.54 TPM:1.43

6044

A_BomaMG_comp15795_c1_seq1

909bp

PREDICTED:_uncharacterized_protein_LOC101742281_[Bombyx_mori]

FPKM:1.49 TPM:1.38

6045

A_BomaMG_comp15796_c0_seq1

336bp

FPKM:2.62 TPM:2.43

6046

A_BomaMG_comp15798_c0_seq1

491bp

FPKM:2.19 TPM:2.03

6047

A_BomaMG_comp15799_c0_seq1

809bp

PREDICTED:_JNK-interacting_protein_3_isoform_X2_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0005078	F	MAP-kinase scaffold activity
GO:0005737	C	cytoplasm
GO:0008088	P	axo-dendritic transport
GO:0009967	P	positive regulation of signal transduction
GO:0016192	P	vesicle-mediated transport
GO:0019894	F	kinesin binding
GO:0030140	C	trans-Golgi network transport vesicle
GO:0043005	C	neuron projection
GO:0046328	P	regulation of JNK cascade

FPKM:2.81 TPM:2.60

6048

A_BomaMG_comp15799_c1_seq1

1006bp

PREDICTED:_JNK-interacting_protein_3_isoform_X1_[Bombyx_mori]

GO:0000139	C	Golgi membrane
GO:0005078	F	MAP-kinase scaffold activity
GO:0005737	C	cytoplasm
GO:0008088	P	axo-dendritic transport
GO:0009967	P	positive regulation of signal transduction
GO:0016192	P	vesicle-mediated transport
GO:0019894	F	kinesin binding
GO:0030140	C	trans-Golgi network transport vesicle
GO:0043005	C	neuron projection
GO:0046328	P	regulation of JNK cascade

FPKM:1.72 TPM:1.60

6049

A_BomaMG_comp15800_c0_seq1

614bp

28S_ribosomal_protein_S6_precursor_[Danaus_plexippus]

GO:0003735	F	structural constituent of ribosome
GO:0005739	C	mitochondrion
GO:0005763	C	mitochondrial small ribosomal subunit
GO:0005840	C	ribosome
GO:0006412	P	translation
GO:0019843	F	rRNA binding
GO:0030529	C	ribonucleoprotein complex
GO:0032543	P	mitochondrial translation
GO:0070181	F	small ribosomal subunit rRNA binding

FPKM:40.50 TPM:37.50

6050

A_BomaMG_comp15801_c0_seq1

212bp

Methyladenine_glycosylase_[Marinobacter_subterrani]

FPKM:4.19 TPM:3.88

6051

A_BomaMG_comp15802_c0_seq1

715bp

PREDICTED:_leucine-rich_repeat_and_calponin_homology_domain-containing_protein_1-like_isoform_X2_[Papilio_xuthus]

GO:0005515	F	protein binding
GO:0005576	C	extracellular region
GO:0005737	C	cytoplasm

FPKM:2.22 TPM:2.06

6052

A_BomaMG_comp15804_c0_seq1

262bp

PREDICTED:_uncharacterized_protein_LOC101740766_[Bombyx_mori]

FPKM:1.62 TPM:1.50

6053

A_BomaMG_comp15804_c0_seq2

836bp

PREDICTED:_uncharacterized_protein_LOC101740766_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0006474	P	N-terminal protein amino acid acetylation
GO:0008080	F	N-acetyltransferase activity
GO:0016740	F	transferase activity
GO:0016746	F	acyltransferase activity
GO:0043234	C	protein-containing complex

FPKM:1.97 TPM:1.82

6054

A_BomaMG_comp15805_c0_seq1

467bp

myosin_vi,_partial_[Papilio_polytes]

GO:0000146	F	microfilament motor activity
GO:0000166	F	nucleotide binding
GO:0003774	F	cytoskeletal motor activity
GO:0003779	F	actin binding
GO:0005515	F	protein binding
GO:0005516	F	calmodulin binding
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0005875	C	microtubule associated complex
GO:0005938	C	cell cortex
GO:0006997	P	nucleus organization
GO:0007015	P	actin filament organization
GO:0007051	P	spindle organization
GO:0007275	P	multicellular organism development
GO:0007283	P	spermatogenesis
GO:0007286	P	spermatid development
GO:0007291	P	sperm individualization
GO:0007297	P	ovarian follicle cell migration
GO:0007298	P	border follicle cell migration
GO:0007391	P	dorsal closure
GO:0007552	P	metamorphosis
GO:0007560	P	imaginal disc morphogenesis
GO:0008017	F	microtubule binding
GO:0008104	P	protein localization
GO:0008152	P	metabolic process
GO:0008363	P	larval chitin-based cuticle development
GO:0016333	P	morphogenesis of follicular epithelium
GO:0016459	C	myosin complex
GO:0016461	C	unconventional myosin complex
GO:0019749	P	cytoskeleton-dependent cytoplasmic transport, nurse cell to oocyte
GO:0030036	P	actin cytoskeleton organization
GO:0030048	P	actin filament-based movement
GO:0030139	C	endocytic vesicle
GO:0030317	P	flagellated sperm motility
GO:0030426	C	growth cone
GO:0030589	P	pseudocleavage involved in syncytial blastoderm formation
GO:0031476	C	myosin VI complex
GO:0031941	C	filamentous actin
GO:0032027	F	myosin light chain binding
GO:0032880	P	regulation of protein localization
GO:0032956	P	regulation of actin cytoskeleton organization
GO:0032970	P	regulation of actin filament-based process
GO:0040001	P	establishment of mitotic spindle localization
GO:0042623	F	ATP hydrolysis activity
GO:0043234	C	protein-containing complex
GO:0045167	P	asymmetric protein localization involved in cell fate determination
GO:0045172	C	germline ring canal
GO:0045175	P	basal protein localization
GO:0045178	C	basal part of cell
GO:0045217	P	cell-cell junction maintenance
GO:0045921	P	positive regulation of exocytosis
GO:0047497	P	mitochondrion transport along microtubule
GO:0048477	P	oogenesis
GO:0051015	F	actin filament binding
GO:0051647	P	nucleus localization
GO:0055057	P	neuroblast division
GO:0055059	P	asymmetric neuroblast division
GO:0061024	P	membrane organization
GO:0070856	F	myosin VI light chain binding
GO:0070864	C	sperm individualization complex
GO:0070865	C	investment cone