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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
6001 A_BomaMG_comp15757_c0_seq1
408bp
FPKM:2.69 TPM:2.49
6002 A_BomaMG_comp15758_c0_seq1
1056bp
FPKM:1.97 TPM:1.83
6003 A_BomaMG_comp1575_c0_seq1
456bp
PREDICTED:_ATP-binding_cassette_sub-family_G_member_4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0033344 P cholesterol efflux
GO:0034041 F ABC-type sterol transporter activity
GO:0042803 F protein homodimerization activity
GO:0046982 F protein heterodimerization activity
GO:0055085 P transmembrane transport
FPKM:0.62 TPM:0.57
6004 A_BomaMG_comp15761_c0_seq1
397bp
putative_outer_membrane_protein_[Pedobacter_sp._BAL39]
FPKM:3.62 TPM:3.35
6005 A_BomaMG_comp15761_c1_seq1
250bp
FPKM:1.86 TPM:1.72
6006 A_BomaMG_comp15762_c0_seq1
294bp
FPKM:2.97 TPM:2.75
6007 A_BomaMG_comp15762_c1_seq1
600bp
FPKM:1.62 TPM:1.50
6008 A_BomaMG_comp15764_c0_seq1
431bp
FPKM:1.36 TPM:1.26
6009 A_BomaMG_comp15764_c1_seq1
401bp
aminotransferase_[Dethiosulfatarculus_sandiegensis]
FPKM:2.47 TPM:2.29
6010 A_BomaMG_comp15765_c0_seq1
261bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744003_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006310 P DNA recombination
GO:0006313 P transposition, DNA-mediated
GO:0015074 P DNA integration
FPKM:2.04 TPM:1.89
6011 A_BomaMG_comp15766_c0_seq1
1153bp
PREDICTED:_coiled-coil_domain-containing_protein_94_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:10.66 TPM:9.87
6012 A_BomaMG_comp15767_c0_seq1
209bp
FPKM:4.45 TPM:4.12
6013 A_BomaMG_comp15769_c0_seq1
525bp
FPKM:4.24 TPM:3.93
6014 A_BomaMG_comp1576_c0_seq1
243bp
hypothetical_protein_PVIIG_04855_[Plasmodium_vivax_India_VII]
FPKM:1.02 TPM:0.94
6015 A_BomaMG_comp15771_c0_seq1
369bp
FPKM:1.92 TPM:1.78
6016 A_BomaMG_comp15772_c0_seq1
637bp
archease_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
FPKM:3.22 TPM:2.99
6017 A_BomaMG_comp15772_c0_seq2
662bp
archease_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0008033 P tRNA processing
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0048680 P positive regulation of axon regeneration
GO:0072669 C tRNA-splicing ligase complex
FPKM:22.75 TPM:21.07
6018 A_BomaMG_comp157745_c0_seq1
315bp
FPKM:1.01 TPM:0.93
6019 A_BomaMG_comp15774_c0_seq1
3531bp
glycerol_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004370 F glycerol kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005975 P carbohydrate metabolic process
GO:0006071 P glycerol metabolic process
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006641 P triglyceride metabolic process
GO:0009409 P response to cold
GO:0010033 P response to organic substance
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019563 P glycerol catabolic process
GO:0042393 F histone binding
GO:0042493 P response to xenobiotic stimulus
GO:0045471 P response to ethanol
GO:0046167 P glycerol-3-phosphate biosynthetic process
FPKM:29.17 TPM:27.01
6020 A_BomaMG_comp15776_c0_seq1
326bp
FPKM:2.10 TPM:1.95
6021 A_BomaMG_comp157779_c0_seq1
266bp
PREDICTED:_uncharacterized_protein_LOC101744165_[Bombyx_mori]
FPKM:3.10 TPM:2.87
6022 A_BomaMG_comp15777_c0_seq1
720bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
FPKM:1.89 TPM:1.75
6023 A_BomaMG_comp15777_c1_seq1
1405bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX10_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0044822 F RNA binding
FPKM:1.38 TPM:1.28
6024 A_BomaMG_comp15778_c0_seq1
443bp
PREDICTED:_lachesin-like_isoform_X1_[Bombyx_mori]
GO:0004872 F signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007399 P nervous system development
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030513 P positive regulation of BMP signaling pathway
GO:0043025 C neuronal cell body
GO:0055072 P iron ion homeostasis
GO:1901215 P negative regulation of neuron death
FPKM:2.20 TPM:2.04
6025 A_BomaMG_comp15778_c1_seq1
219bp
PREDICTED:_lachesin-like_isoform_X1_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007605 P sensory perception of sound
GO:0016020 C membrane
GO:0031225 C anchored component of membrane
FPKM:1.47 TPM:1.36
6026 A_BomaMG_comp15779_c0_seq1
575bp
hypothetical_protein_TRIADDRAFT_59044_[Trichoplax_adhaerens]
FPKM:1.38 TPM:1.28
6027 A_BomaMG_comp15781_c0_seq1
730bp
FPKM:1.36 TPM:1.26
6028 A_BomaMG_comp15783_c0_seq1
483bp
Sentrin-specific_protease_[Operophtera_brumata]
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016787 F hydrolase activity
FPKM:1.80 TPM:1.67
6029 A_BomaMG_comp15783_c1_seq1
294bp
FPKM:3.27 TPM:3.03
6030 A_BomaMG_comp15784_c0_seq1
642bp
PREDICTED:_centrosomal_protein_of_164_kDa_isoform_X3_[Bombyx_mori]
FPKM:2.06 TPM:1.91
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