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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
571 A_BomaMG_comp10973_c0_seq1
368bp
FPKM:2.36 TPM:2.19
572 A_BomaMG_comp10974_c0_seq1
570bp
FPKM:3.40 TPM:3.15
573 A_BomaMG_comp10975_c0_seq1
546bp
hypothetical_protein_SINV_12132,_partial_[Solenopsis_invicta]
FPKM:2.98 TPM:2.76
574 A_BomaMG_comp109767_c0_seq1
560bp
hypothetical_protein_RR46_00002_[Papilio_xuthus]
FPKM:2.78 TPM:2.57
575 A_BomaMG_comp10976_c0_seq1
1164bp
FPKM:2.03 TPM:1.88
576 A_BomaMG_comp10976_c0_seq2
1291bp
FPKM:1.98 TPM:1.84
577 A_BomaMG_comp10977_c0_seq1
228bp
hypothetical_protein_SSBG_02845_[Streptomyces_sp._SPB074]
FPKM:0.63 TPM:0.59
578 A_BomaMG_comp10978_c0_seq1
508bp
FPKM:2.70 TPM:2.50
579 A_BomaMG_comp1097_c0_seq1
416bp
PREDICTED:_tyrosine-protein_kinase_PR2_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
FPKM:1.45 TPM:1.34
580 A_BomaMG_comp1097_c1_seq1
326bp
putative_tyrosine-protein_kinase_pr2_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004715 F non-membrane spanning protein tyrosine kinase activity
GO:0005102 F signaling receptor binding
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030154 P cell differentiation
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0038083 P peptidyl-tyrosine autophosphorylation
GO:0042127 P regulation of cell population proliferation
GO:0045087 P innate immune response
FPKM:1.17 TPM:1.08
581 A_BomaMG_comp10980_c0_seq1
694bp
FPKM:3.24 TPM:3.00
582 A_BomaMG_comp10981_c0_seq1
747bp
FPKM:1.98 TPM:1.83
583 A_BomaMG_comp10982_c0_seq1
249bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.94 TPM:0.87
584 A_BomaMG_comp10984_c0_seq1
308bp
hypothetical_protein_[Erythrobacter_longus]
FPKM:2.92 TPM:2.71
585 A_BomaMG_comp109854_c0_seq1
262bp
FPKM:3.64 TPM:3.37
586 A_BomaMG_comp10985_c0_seq1
682bp
hypothetical_protein_RR48_05213_[Papilio_machaon]
FPKM:1.35 TPM:1.25
587 A_BomaMG_comp10985_c1_seq1
214bp
FPKM:2.42 TPM:2.24
588 A_BomaMG_comp10989_c0_seq1
1005bp
PREDICTED:_uncharacterized_protein_LOC107073003_[Polistes_dominula]
FPKM:2.75 TPM:2.55
589 A_BomaMG_comp109903_c0_seq1
1544bp
PREDICTED:_DDB1-_and_CUL4-associated_factor_13_[Papilio_machaon]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0016567 P protein ubiquitination
GO:0030529 C ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0042254 P ribosome biogenesis
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
FPKM:3.13 TPM:2.90
590 A_BomaMG_comp10990_c0_seq1
1114bp
FPKM:3.23 TPM:2.99
591 A_BomaMG_comp109910_c0_seq1
931bp
PREDICTED:_histone_acetyltransferase_KAT2A_[Papilio_machaon]
GO:0000123 C histone acetyltransferase complex
GO:0000790 C chromatin
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001843 P neural tube closure
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005615 C extracellular space
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0008080 F N-acetyltransferase activity
GO:0008134 F transcription factor binding
GO:0008283 P cell population proliferation
GO:0010484 F H3 histone acetyltransferase activity
GO:0014070 P response to organic cyclic compound
GO:0016407 F acetyltransferase activity
GO:0016573 P histone acetylation
GO:0016578 P histone deubiquitination
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0019903 F protein phosphatase binding
GO:0021537 P telencephalon development
GO:0022037 P metencephalon development
GO:0030901 P midbrain development
GO:0030914 C SAGA complex
GO:0031346 P positive regulation of cell projection organization
GO:0031647 P regulation of protein stability
GO:0031667 P response to nutrient levels
GO:0033276 C transcription factor TFTC complex
GO:0035066 P positive regulation of histone acetylation
GO:0035264 P multicellular organism growth
GO:0035948 P obsolete positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter
GO:0042826 F histone deacetylase binding
GO:0043966 P histone H3 acetylation
GO:0043983 P histone H4-K12 acetylation
GO:0043997 F histone acetyltransferase activity (H4-K12 specific)
GO:0044154 P histone H3-K14 acetylation
GO:0048312 P intracellular distribution of mitochondria
GO:0055007 P cardiac muscle cell differentiation
GO:0071356 P cellular response to tumor necrosis factor
GO:0071929 P alpha-tubulin acetylation
GO:0072686 C mitotic spindle
GO:1903146 P regulation of autophagy of mitochondrion
GO:1903955 P positive regulation of protein targeting to mitochondrion
GO:1990090 P cellular response to nerve growth factor stimulus
GO:2000679 P positive regulation of transcription regulatory region DNA binding
FPKM:3.43 TPM:3.18
592 A_BomaMG_comp10991_c0_seq1
628bp
FPKM:1.29 TPM:1.19
593 A_BomaMG_comp10993_c0_seq1
2410bp
PREDICTED:_histone-lysine_N-methyltransferase_SUV420H1_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005720 C heterochromatin
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0034770 P histone H4-K20 methylation
GO:0034772 P histone H4-K20 dimethylation
GO:0034773 P histone H4-K20 trimethylation
GO:0040029 P regulation of gene expression, epigenetic
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
FPKM:2.67 TPM:2.47
594 A_BomaMG_comp10994_c0_seq1
866bp
FPKM:2.18 TPM:2.02
595 A_BomaMG_comp10996_c0_seq1
1248bp
PREDICTED:_nuclear_envelope_integral_membrane_protein_1a_[Papilio_xuthus]
GO:0001654 P eye development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005637 C nuclear inner membrane
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043621 F protein self-association
FPKM:2.70 TPM:2.50
596 A_BomaMG_comp10997_c0_seq1
1552bp
FPKM:2.17 TPM:2.01
597 A_BomaMG_comp109984_c0_seq1
1598bp
PREDICTED:_ribosomal_RNA-processing_protein_8_[Plutella_xylostella]
GO:0000183 P rDNA heterochromatin assembly
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005677 C chromatin silencing complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0033553 C rDNA heterochromatin
GO:0035064 F methylated histone binding
GO:0042149 P cellular response to glucose starvation
GO:0044822 F RNA binding
GO:0046015 P regulation of transcription by glucose
GO:0071158 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
FPKM:2.46 TPM:2.28
598 A_BomaMG_comp10998_c0_seq1
404bp
PREDICTED:_E3_ubiquitin-protein_ligase_listerin_[Bombyx_mori]
FPKM:4.88 TPM:4.51
599 A_BomaMG_comp10999_c0_seq1
1297bp
FPKM:2.52 TPM:2.33
600 A_BomaMG_comp10999_c1_seq1
248bp
FPKM:0.48 TPM:0.44
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