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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
541 A_BomaMG_comp10948_c0_seq1
204bp
FPKM:1.98 TPM:1.83
542 A_BomaMG_comp1094_c0_seq1
504bp
hemolymph_juvenile_hormone_binding_protein_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
FPKM:1.05 TPM:0.97
543 A_BomaMG_comp109500_c0_seq1
294bp
FPKM:3.27 TPM:3.03
544 A_BomaMG_comp109505_c0_seq1
504bp
survivin-1_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0001890 P placenta development
GO:0004842 F ubiquitin-protein transferase activity
GO:0004869 F cysteine-type endopeptidase inhibitor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0009966 P regulation of signal transduction
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030414 F peptidase inhibitor activity
GO:0030496 C midbody
GO:0032465 P regulation of cytokinesis
GO:0042127 P regulation of cell population proliferation
GO:0043066 P negative regulation of apoptotic process
GO:0051301 P cell division
GO:0060711 P labyrinthine layer development
GO:0060712 P spongiotrophoblast layer development
GO:0061631 F ubiquitin conjugating enzyme activity
GO:2001237 P negative regulation of extrinsic apoptotic signaling pathway
FPKM:4.63 TPM:4.28
545 A_BomaMG_comp10950_c0_seq1
1479bp
PREDICTED:_uncharacterized_protein_LOC105841428_[Bombyx_mori]
FPKM:2.87 TPM:2.66
546 A_BomaMG_comp109512_c0_seq1
538bp
FPKM:1.33 TPM:1.23
547 A_BomaMG_comp10951_c0_seq1
317bp
NADPH_oxidoreductase_[Bombyx_mori]
FPKM:4.22 TPM:3.91
548 A_BomaMG_comp10952_c0_seq1
430bp
FPKM:3.96 TPM:3.66
549 A_BomaMG_comp10954_c0_seq1
513bp
uncharacterized_protein_Dmoj_GI11772_[Drosophila_mojavensis]
FPKM:3.78 TPM:3.50
550 A_BomaMG_comp10955_c0_seq1
640bp
PREDICTED:_E3_SUMO-protein_ligase_NSE2-like_[Plutella_xylostella]
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016605 C PML body
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0030915 C Smc5-Smc6 complex
GO:0034184 P positive regulation of maintenance of mitotic sister chromatid cohesion
GO:0045842 P positive regulation of mitotic metaphase/anaphase transition
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0090398 P cellular senescence
FPKM:4.65 TPM:4.31
551 A_BomaMG_comp10958_c0_seq1
1319bp
PREDICTED:_probable_nucleoporin_Nup54_isoform_X2_[Bombyx_mori]
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006605 P protein targeting
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006913 P nucleocytoplasmic transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0036228 P protein localization to nuclear inner membrane
GO:0044613 C nuclear pore central transport channel
GO:0051028 P mRNA transport
FPKM:2.94 TPM:2.73
552 A_BomaMG_comp109591_c0_seq1
463bp
FPKM:3.13 TPM:2.90
553 A_BomaMG_comp109594_c0_seq1
876bp
PREDICTED:_WD_repeat-containing_protein_CG11141_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:3.51 TPM:3.25
554 A_BomaMG_comp109595_c0_seq1
222bp
FPKM:4.89 TPM:4.53
555 A_BomaMG_comp1095_c0_seq1
475bp
PREDICTED:_amidophosphoribosyltransferase-like_isoform_X1_[Bombyx_mori]
GO:0004044 F amidophosphoribosyltransferase activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008340 P determination of adult lifespan
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0040016 P embryonic cleavage
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:1.04 TPM:0.96
556 A_BomaMG_comp1095_c1_seq1
212bp
PREDICTED:_amidophosphoribosyltransferase-like,_partial_[Plutella_xylostella]
GO:0004044 F amidophosphoribosyltransferase activity
GO:0006164 P purine nucleotide biosynthetic process
GO:0006189 P 'de novo' IMP biosynthetic process
GO:0006541 P glutamine metabolic process
GO:0008340 P determination of adult lifespan
GO:0009113 P purine nucleobase biosynthetic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0040016 P embryonic cleavage
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
FPKM:1.68 TPM:1.55
557 A_BomaMG_comp10961_c0_seq1
1648bp
PREDICTED:_inositol-trisphosphate_3-kinase_A_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0006020 P inositol metabolic process
GO:0006468 P protein phosphorylation
GO:0007165 P signal transduction
GO:0008440 F inositol-1,4,5-trisphosphate 3-kinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030036 P actin cytoskeleton organization
GO:0043197 C dendritic spine
GO:0043647 P inositol phosphate metabolic process
GO:0048167 P regulation of synaptic plasticity
GO:0048365 F small GTPase binding
GO:0061003 P positive regulation of dendritic spine morphogenesis
GO:0097062 P dendritic spine maintenance
FPKM:3.09 TPM:2.86
558 A_BomaMG_comp10962_c0_seq1
993bp
PREDICTED:_leucine-rich_repeat_and_calponin_homology_domain-containing_protein_1-like,_partial_[Bombyx_mori]
FPKM:2.42 TPM:2.24
559 A_BomaMG_comp109636_c0_seq1
423bp
FPKM:1.54 TPM:1.43
560 A_BomaMG_comp10963_c0_seq1
380bp
FPKM:3.41 TPM:3.16
561 A_BomaMG_comp10964_c0_seq1
703bp
FPKM:2.40 TPM:2.23
562 A_BomaMG_comp10964_c1_seq1
295bp
FPKM:1.18 TPM:1.09
563 A_BomaMG_comp10965_c0_seq1
2879bp
PREDICTED:_fasciclin-2-like_isoform_X3_[Bombyx_mori]
GO:0001746 P Bolwig's organ morphogenesis
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007413 P axonal fasciculation
GO:0007528 P neuromuscular junction development
GO:0007611 P learning or memory
GO:0007612 P learning
GO:0007614 P short-term memory
GO:0008038 P neuron recognition
GO:0008045 P motor neuron axon guidance
GO:0008355 P olfactory learning
GO:0008360 P regulation of cell shape
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016319 P mushroom body development
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0031225 C anchored component of membrane
GO:0031594 C neuromuscular junction
GO:0035152 P regulation of tube architecture, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0036062 C presynaptic periactive zone
GO:0042059 P negative regulation of epidermal growth factor receptor signaling pathway
GO:0042734 C presynaptic membrane
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0045211 C postsynaptic membrane
GO:0048149 P behavioral response to ethanol
GO:0048667 P cell morphogenesis involved in neuron differentiation
GO:0048786 C presynaptic active zone
GO:0048803 P imaginal disc-derived male genitalia morphogenesis
GO:0050803 P regulation of synapse structure or activity
GO:0050808 P synapse organization
GO:0061174 C type I terminal bouton
GO:0072499 P photoreceptor cell axon guidance
GO:0072553 P terminal button organization
GO:0097482 C muscle cell postsynaptic specialization
GO:1904800 P negative regulation of neuron remodeling
FPKM:2.80 TPM:2.59
564 A_BomaMG_comp10966_c0_seq1
1091bp
PREDICTED:_probable_DNA_mismatch_repair_protein_Msh6_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000400 F four-way junction DNA binding
GO:0000710 P meiotic mismatch repair
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006281 P DNA repair
GO:0006298 P mismatch repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007131 P reciprocal meiotic recombination
GO:0008340 P determination of adult lifespan
GO:0008630 P intrinsic apoptotic signaling pathway in response to DNA damage
GO:0009411 P response to UV
GO:0016446 P somatic hypermutation of immunoglobulin genes
GO:0016447 P somatic recombination of immunoglobulin gene segments
GO:0016887 F ATP hydrolysis activity
GO:0030983 F mismatched DNA binding
GO:0032137 F guanine/thymine mispair binding
GO:0032138 F single base insertion or deletion binding
GO:0032142 F single guanine insertion binding
GO:0032143 F single thymine insertion binding
GO:0032301 C MutSalpha complex
GO:0032357 F oxidized purine DNA binding
GO:0032405 F MutLalpha complex binding
GO:0035064 F methylated histone binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043570 P maintenance of DNA repeat elements
GO:0045190 P isotype switching
GO:0045830 P positive regulation of isotype switching
GO:0045910 P negative regulation of DNA recombination
GO:0051096 P positive regulation of helicase activity
GO:0097193 P intrinsic apoptotic signaling pathway
FPKM:2.75 TPM:2.55
565 A_BomaMG_comp10969_c0_seq1
595bp
CG10993-like_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000447 P endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 P endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 P endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0034462 P small-subunit processome assembly
GO:0042254 P ribosome biogenesis
FPKM:3.28 TPM:3.04
566 A_BomaMG_comp1096_c0_seq1
221bp
PREDICTED:_uncharacterized_protein_LOC105842413_[Bombyx_mori]
FPKM:2.84 TPM:2.63
567 A_BomaMG_comp10970_c0_seq1
328bp
FPKM:1.38 TPM:1.28
568 A_BomaMG_comp10971_c0_seq1
296bp
UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_[Leptospira_inadai]
FPKM:0.88 TPM:0.81
569 A_BomaMG_comp109723_c0_seq1
433bp
FPKM:3.64 TPM:3.37
570 A_BomaMG_comp10972_c0_seq1
1931bp
PREDICTED:_zinc_finger_protein_41-like_isoform_X1_[Amyelois_transitella]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.47 TPM:2.29
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