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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp109984_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ribosomal_RNA-processing_protein_8_[Plutella_xylostella]
Ontology
GO:0000183 P rDNA heterochromatin assembly
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005677 C chromatin silencing complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0033553 C rDNA heterochromatin
GO:0035064 F methylated histone binding
GO:0042149 P cellular response to glucose starvation
GO:0044822 F RNA binding
GO:0046015 P regulation of transcription by glucose
GO:0071158 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
Transcript
Level		FPKM:2.46 TPM:2.28
ORF Entry
Sequence
(Nucleotide)
CGTCAAAGCGGGTAGTTTGGATTTCTTCACGGGCGCGTCTCGTATTTTCGTGAACTCCAT
GAAGTAGAAGACGGTGTGACTCTTGTCCAGTTTAATTAGTTTGAATCCGATCCGCTCTAC
TGCTTTAGTAAAGTCCTCAACTTTTTCAAAACGACTCTCAACTTCTGCTATTAGAAGATG
GCCTCCAATTTTCAATATTCTACTAGCTTCGATCAAGTACTGAGTGAGTTCAGTGCCCAT
TAGTGCCAAAGAATAGACTGCAACATCCATGGACGCTGCCAGTAGTGGGGTGTGTGCTAT
GTTACACACTTCTACACTTGGTGTAGTGGCTACCAAATCGAAGGACCGAACTGGATGGGG
TACACGATGTGACAGCGTAGCTTCTCCACAACCCATATCAGCTATTTTATGTGTTTTAGG
CATTTTCTGAATCCTCTTTACAATTAGGTCTAATGGATTGATGGGCCATTTCTTGAGTTG
TTGCTGGTAACCTTCATGGTAAGTTTTGAAGGCAGCGGGATCACTCTGGAATAATTGATG
TGCTTCTGTACCTGATGATGTGTATAGTTTTTCATTGAGGTACCTGAATTGTGCAGCTTT
TAATCTTTCAAGCATTCTCTCCCTCAACTTGTTTCCGTTTCTCACGTTAGCAGTAAAAGG
ACTTCTCAATGAGTTTTCTTGTAACATCTTTCTTAGTTTTTCTTTTTTAAAATCAATTTT
AACATAATTTGATGCTTCTAATTTATTTATATTTTCATCCTTGTTTGTTTTAAGGTGTTT
TGCTTTCTTTCCTTTGCTTTCTTTAAATAAAATATCTTCTTGATCATCATTCTGTAATTG
TTCATTTAACTTTTTCCTTTTTTCATTTATAAGTACTTCATCTACTATGTCTCCATTGAG
GTCAGAAACTTCAACATAGTCATCTGGTTGCGAGTTATTTATACTTTTACGTTTTTTTGT
TCTGGTTTTTGTAGTCTTTTTTAATGTACTATCAGTAACACTTGTGTCTATGGAATGTTT
TTGTGTACTGTCACTCTCTTTATTTACTTCATTAGATTTATTAATTTTTGATTTTTGAAA
CTTAACATTTTTATTTTTTATTTTATTAACATTTTTATTTTCTATATTTTTGTGATGTTG
ATAATTATTTTTACTGTTAGATTTAGTGATATTCGATTTCAGTAAGCTGACAAAATTATT
CTTTTTATTTGTATTTCCATCTTCATTTATTATTTTGTTACTATTCTCATTCTTGTTTTT
ACTTTTCTGGTTTTTTATCTGATTGATTTTTTTGTACTTTGTGTTTAAATTGACTTTATT
TGCACTTTTTGGAAACTGCTTGGTGTTGGTTAATTGAATATTTATTGGAGTTTCAGTTTT
CAGTATTAAGTTTTGTGATTTTGCCTTGACGGTTTTCCTACTGAATTTAATATTTGATTG
GGGCACATAACTATCCCATTCCGGTATTTTGAACATTTTAATTATAATTCAAGTCTATTA
AGAATACAGTATTTTCTTCTTCAGTCCAAACATTTGCTAGATACACACTAAATGCTCTCC
GAAGATGTTTTAATGAATCAAGTTTTATTTTATTTAGG
(1598 bp)

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