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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5701 A_BomaMG_comp15461_c0_seq1
1674bp
PREDICTED:_protein_HID1_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:1.24 TPM:1.15
5702 A_BomaMG_comp15461_c0_seq2
1651bp
PREDICTED:_protein_HID1_[Bombyx_mori]
GO:0000138 C Golgi trans cisterna
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005797 C Golgi medial cisterna
GO:0005881 C cytoplasmic microtubule
GO:0006886 P intracellular protein transport
GO:0016020 C membrane
GO:0031001 P response to brefeldin A
GO:0070062 C extracellular exosome
GO:0090498 C extrinsic component of Golgi membrane
FPKM:1.11 TPM:1.03
5703 A_BomaMG_comp154623_c0_seq1
564bp
FPKM:1.86 TPM:1.72
5704 A_BomaMG_comp154627_c0_seq1
276bp
hypothetical_protein_[Oribacterium_asaccharolyticum]
FPKM:3.50 TPM:3.24
5705 A_BomaMG_comp15464_c0_seq1
323bp
hypothetical_protein_[Salinibacillus_aidingensis]
FPKM:1.91 TPM:1.76
5706 A_BomaMG_comp15465_c0_seq1
448bp
FPKM:2.16 TPM:2.00
5707 A_BomaMG_comp154667_c0_seq1
1539bp
PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
FPKM:1.52 TPM:1.41
5708 A_BomaMG_comp15466_c0_seq1
360bp
hypothetical_protein_[Enterobacter_aerogenes]
FPKM:3.22 TPM:2.99
5709 A_BomaMG_comp15467_c0_seq1
2249bp
F-box_only_protein_21_[Bombyx_mori]
GO:0003677 F DNA binding
FPKM:13.15 TPM:12.18
5710 A_BomaMG_comp15470_c0_seq1
307bp
FPKM:2.41 TPM:2.23
5711 A_BomaMG_comp154710_c0_seq1
254bp
FPKM:0.44 TPM:0.41
5712 A_BomaMG_comp15471_c0_seq1
771bp
PREDICTED:_DNA_repair_protein_complementing_XP-A_cells_homolog_[Amyelois_transitella]
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
FPKM:1.15 TPM:1.06
5713 A_BomaMG_comp15471_c1_seq1
407bp
FPKM:1.35 TPM:1.25
5714 A_BomaMG_comp154722_c0_seq1
288bp
FPKM:1.25 TPM:1.16
5715 A_BomaMG_comp15472_c0_seq1
369bp
hypothetical_protein_L798_05633_[Zootermopsis_nevadensis]
FPKM:5.06 TPM:4.68
5716 A_BomaMG_comp15474_c0_seq1
293bp
FPKM:1.20 TPM:1.11
5717 A_BomaMG_comp15475_c0_seq1
207bp
transposase_and_inactivated_derivatives_[Ruminococcus_sp._CAG:90]
FPKM:1.85 TPM:1.72
5718 A_BomaMG_comp15476_c0_seq1
230bp
FPKM:1.23 TPM:1.14
5719 A_BomaMG_comp15477_c0_seq1
609bp
FPKM:1.27 TPM:1.17
5720 A_BomaMG_comp15477_c1_seq1
253bp
FPKM:1.79 TPM:1.66
5721 A_BomaMG_comp15479_c0_seq1
562bp
FPKM:1.51 TPM:1.40
5722 A_BomaMG_comp15480_c0_seq1
237bp
PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X1_[Bombyx_mori]
FPKM:1.11 TPM:1.02
5723 A_BomaMG_comp15481_c0_seq1
1575bp
PREDICTED:_monoacylglycerol_lipase_ABHD12-like_isoform_X1_[Papilio_xuthus]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0046464 P acylglycerol catabolic process
GO:0047372 F acylglycerol lipase activity
FPKM:8.96 TPM:8.30
5724 A_BomaMG_comp154826_c0_seq1
727bp
FPKM:2.11 TPM:1.95
5725 A_BomaMG_comp15483_c0_seq1
742bp
FPKM:2.18 TPM:2.01
5726 A_BomaMG_comp15484_c0_seq1
218bp
hypothetical_protein_RSAG8_07530,_partial_[Rhizoctonia_solani_AG-8_WAC10335]
FPKM:3.00 TPM:2.78
5727 A_BomaMG_comp15485_c0_seq1
1329bp
PREDICTED:_mitochondrial_import_receptor_subunit_TOM22_homolog_isoform_X1_[Plutella_xylostella]
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:15.99 TPM:14.80
5728 A_BomaMG_comp15486_c0_seq1
242bp
PREDICTED:_leucine-rich_repeat-containing_protein_16A_[Bombyx_mori]
FPKM:4.13 TPM:3.82
5729 A_BomaMG_comp15490_c0_seq1
377bp
PREDICTED:_receptor-mediated_endocytosis_protein_6_homolog_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005096 F GTPase activator activity
GO:0005829 C cytosol
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0032483 P regulation of Rab protein signal transduction
GO:0032794 F GTPase activating protein binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0051223 P regulation of protein transport
FPKM:2.08 TPM:1.93
5730 A_BomaMG_comp15492_c0_seq1
305bp
FPKM:1.63 TPM:1.51
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