SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp15471_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DNA_repair_protein_complementing_XP-A_cells_homolog_[Amyelois_transitella]
Ontology
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000715 P nucleotide-excision repair, DNA damage recognition
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0033683 P nucleotide-excision repair, DNA incision
GO:0046872 F metal ion binding
GO:0070914 P UV-damage excision repair
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
Transcript
Level		FPKM:1.15 TPM:1.06
ORF Entry
Sequence
(Nucleotide)
GCGTGCAAACTTTTGTTTTAGATGGGGCGAATTAACCTAAATGCAACACATCTAATGGCT
TCCTGATATTTCGGCGCTGTTACATACGACATGATCACAGGTAGGTCGGAGACCGTGGGG
AGGATTTTAGAAGCAGAAAAATCTTATCTACCACCCTCCTTTCTAGTCCGTTTTAGGTGT
TAGCAGCAATTAGGTAAGCAAAACAATTCTAAATATGTTAGATCGGTGGACAATCCAACA
GCCTGTTGTTAAGTGGCCACCCTCCAAACCGAAATGAATTACTACTTTATGGCAGTAATA
AGCAGGCTGGTGGTTAGGTATCTGTGTAGGCTAACAAGATGTCCTACCATTTGGCATTCT
TCAAATTAGATCTCCTGATTTGAACCTAGAATGCATTTTAGAGCTGTGAATAATAATAGC
TTGAACCTGGGTAGATTAACTTTTACTCAGGTAATTTGCTCCATTTTCACAAAATATTAT
AATTTTTTTTTTGTTTCTTTAAAAATTCCATTTTTGACTAATCAATGTTATGTTAACAGC
TATCACAATTTGTACAATACATAATTTTAAAAGGTAGCACTTGTTTTTCCATACTTTTTT
TTCAATTTAAAATGTCACATCTTCTCATAGGACTGGGTGTGTCCGCAGGAGAGGCAGGAA
CGGGAGTAGACGTCGGCGCGGGCATCGTGCGTCTCGGGACCGAACTCGTGCTCGTGTGCG
GCGCGCTGGGGCGTGTACAGACTCGAGCGCACGTCCATCCGCAGCGCGCGC
(771 bp)

- SilkBase 1999-2023 -