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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp154667_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_SH3RF1,_partial_[Bombyx_mori]
Ontology
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030027 C lamellipodium
GO:0042995 C cell projection
GO:0046328 P regulation of JNK cascade
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:1.52 TPM:1.41
ORF Entry
Sequence
(Nucleotide)
GAGGAATTCAGCGCCGAAGAAGGTGGTCGGCGTCGGACAGCGGATAAGAGCGGGACACCT
CCAAGTACAGCAGGGATCTCTCTCAGCACGTGACGGTAAACAGTTGCCGCCACACGCCAG
AGCCCTGTACGATTACATTTCCAAGGAGCCTGGAGATCTGTCATTCAAGAAAGGCGAAAT
AATACTCTTGCAGAAGAAACTAGACGCGTTTTGGTATCAAGGAGAATGTTCCGGAAGAAC
TGGAATGTTTCCAATCACTTTTGTACAGGTCGTCGTACAGTTGCCGGCGGCGACGGCGCT
CTGCAAAGCGCTCTACGACTTCCGAATGTCAGCCCCCGACGAAGAAGGGTGTCTTGCTTT
TGATAAAGGAGCTATAATAACGGTGCACCGTCGCGTCGATGACAACTGGGCCGAGGGTAG
ACTAGAGAACAGAGTCGGAATCTTCCCTATAGCGTTCGTCGAACTCAACCAGGCGGCCAG
GCAGCTTATAAACTGCGCGCCCCTGAACCGACCCGTGCCGCCGGTCCCGGGACACGCGCG
GCCCGGACACTCCGAACACAGACATCACTCTCAGCATCCGCATCGCTATCAGCCCATGTC
GGTCTCTACACCGGCGACGTCACAGGGCAACTACCAGAACATGGCAACGATGACCCAATC
CCACCCCAACTACCCGACAGCGATGCTGGTCCAACAGCCGCAGACACTGGGCCCACACGC
GGGCCTGCTCTCGACGCCGCCGCGGAACATTCTCGAACAGCAGTCGAAGCACGCGATAGA
TCTGATACACTTTAGCAACAAGGGCCACGGCGTGCTCGGCCTGCAGAGCGTGTCCCGCAT
CGGCGACGTCAACTACGACAGGACGCGCGTTAAGTTCGACTACAGTTCGACTCCCGCGGA
TTCGACGTATCAAAACGTGCGCCCCCCCGTCTCCAACAACCCCAGCTCGGACTCCAGTTC
CAGCATGAACACTCCATCCGTGGGCGTGAGTTCCAATACCACGCCCAACACCAGCTCCGA
CACGAGCACCTGTGAGAGCAACGAGCCGAGCCTGCCGAGTTCTCCGGATAACAACATCGA
CCGGACCGCCGCGGTCAACGGGCCCGACCCGGATCCTGACCGACGCGAACCTTCACTAAA
CACCTCGATGGGAATACTGAGCCTGAACGAGAGCTCCACCGCAACCAACACGTCGCTCAA
CGTCAGCCTGCCCCCTTCAGAGAGTCCCAAACCGAACGTTTCGAATGAAGAGGTACAGGA
AACGGAAGAAGTCAGACTAGACGCCCCGTCTTCCAGCAAAGTAGTGATCCGGTCGAGCGG
GCCGGACTCCCTGCTGAACTTCGGACTCGGTCTGCAGGCGGCGCTGTCGCCATCTCACGG
CCAGGAGGGGAACTACGTGGTGTCGAGATCGCACAGAGACCCTCACAGGGAGAGGGAGAA
AAGACACAGTCTCACGCCCTCGACGCATTTGCAGGCCAATCATAATACGCCGAATAGACA
TTCAGCGGAGATAGTGGCGACCAGTCTGCTGGACGCGGC
(1539 bp)

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