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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

5611

A_BomaMG_comp15378_c0_seq1

1059bp

FPKM:6.21 TPM:5.75

5612

A_BomaMG_comp15382_c0_seq1

288bp

ubiquitin-protein_ligase_[Medicago_truncatula]

FPKM:2.50 TPM:2.32

5613

A_BomaMG_comp15382_c1_seq1

205bp

hypothetical_protein_NOS3756_40640_[Nostoc_sp._NIES-3756]

FPKM:0.97 TPM:0.90

5614

A_BomaMG_comp15383_c0_seq1

692bp

FPKM:1.92 TPM:1.78

5615

A_BomaMG_comp15384_c0_seq1

618bp

FPKM:1.09 TPM:1.01

5616

A_BomaMG_comp15385_c0_seq1

519bp

PREDICTED:_codanin-1_[Bombyx_mori]

GO:0001738	P	morphogenesis of a polarized epithelium
GO:0003674	F	molecular_function
GO:0005737	C	cytoplasm
GO:0007560	P	imaginal disc morphogenesis
GO:0042048	P	olfactory behavior
GO:0042127	P	regulation of cell population proliferation
GO:0046331	P	lateral inhibition

FPKM:1.51 TPM:1.40

5617

A_BomaMG_comp15386_c0_seq1

206bp

hypothetical_protein_NitaMp073_[Nicotiana_tabacum]

FPKM:0.00 TPM:0.00

5618

A_BomaMG_comp15387_c0_seq1

290bp

FPKM:1.23 TPM:1.14

5619

A_BomaMG_comp15389_c0_seq1

365bp

FPKM:0.00 TPM:0.00

5620

A_BomaMG_comp15389_c0_seq2

403bp

PREDICTED:_putative_nuclease_HARBI1_[Papilio_machaon]

FPKM:1.07 TPM:0.99

5621

A_BomaMG_comp1538_c0_seq1

454bp

FPKM:0.87 TPM:0.81

5622

A_BomaMG_comp15390_c0_seq1

706bp

PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]

GO:0000287	F	magnesium ion binding
GO:0004721	F	phosphoprotein phosphatase activity
GO:0004725	F	protein tyrosine phosphatase activity
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0006281	P	DNA repair
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006470	P	protein dephosphorylation
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007275	P	multicellular organism development
GO:0014706	P	striated muscle tissue development
GO:0016568	P	chromatin organization
GO:0016576	P	histone dephosphorylation
GO:0016787	F	hydrolase activity
GO:0035335	P	peptidyl-tyrosine dephosphorylation
GO:0046872	F	metal ion binding
GO:0097192	P	extrinsic apoptotic signaling pathway in absence of ligand
GO:0097345	P	mitochondrial outer membrane permeabilization

FPKM:1.29 TPM:1.20

5623

A_BomaMG_comp15390_c1_seq1

395bp

PREDICTED:_developmental_protein_eyes_absent_[Bombyx_mori]

GO:0000132	P	establishment of mitotic spindle orientation
GO:0001656	P	metanephros development
GO:0001657	P	ureteric bud development
GO:0001658	P	branching involved in ureteric bud morphogenesis
GO:0003151	P	outflow tract morphogenesis
GO:0003723	F	RNA binding
GO:0004721	F	phosphoprotein phosphatase activity
GO:0004725	F	protein tyrosine phosphatase activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0006281	P	DNA repair
GO:0006302	P	double-strand break repair
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006470	P	protein dephosphorylation
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007275	P	multicellular organism development
GO:0007389	P	pattern specification process
GO:0007501	P	mesodermal cell fate specification
GO:0009887	P	animal organ morphogenesis
GO:0010212	P	response to ionizing radiation
GO:0014706	P	striated muscle tissue development
GO:0016568	P	chromatin organization
GO:0016576	P	histone dephosphorylation
GO:0016787	F	hydrolase activity
GO:0016925	P	protein sumoylation
GO:0032993	C	protein-DNA complex
GO:0034613	P	cellular protein localization
GO:0035088	P	establishment or maintenance of apical/basal cell polarity
GO:0035335	P	peptidyl-tyrosine dephosphorylation
GO:0035909	P	aorta morphogenesis
GO:0042471	P	ear morphogenesis
GO:0042472	P	inner ear morphogenesis
GO:0042473	P	outer ear morphogenesis
GO:0042474	P	middle ear morphogenesis
GO:0043234	C	protein-containing complex
GO:0045165	P	cell fate commitment
GO:0045664	P	regulation of neuron differentiation
GO:0045739	P	positive regulation of DNA repair
GO:0045747	P	positive regulation of Notch signaling pathway
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0045944	P	positive regulation of transcription by RNA polymerase II
GO:0046872	F	metal ion binding
GO:0048665	P	neuron fate specification
GO:0048704	P	embryonic skeletal system morphogenesis
GO:0048752	P	semicircular canal morphogenesis
GO:0048856	P	anatomical structure development
GO:0050679	P	positive regulation of epithelial cell proliferation
GO:0060037	P	pharyngeal system development
GO:0060487	P	lung epithelial cell differentiation
GO:0071599	P	otic vesicle development
GO:0071600	P	otic vesicle morphogenesis
GO:0072513	P	positive regulation of secondary heart field cardioblast proliferation
GO:0090103	P	cochlea morphogenesis
GO:2001240	P	negative regulation of extrinsic apoptotic signaling pathway in absence of ligand