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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5581 A_BomaMG_comp15343_c0_seq1
241bp
hypothetical_protein_AC579_7115_[Pseudocercospora_musae]
FPKM:1.05 TPM:0.97
5582 A_BomaMG_comp153454_c0_seq1
349bp
PREDICTED:_LOW_QUALITY_PROTEIN:_otogelin-like,_partial_[Protobothrops_mucrosquamatus]
FPKM:1.62 TPM:1.50
5583 A_BomaMG_comp15346_c0_seq1
417bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.73 TPM:1.60
5584 A_BomaMG_comp15346_c1_seq1
230bp
FPKM:1.23 TPM:1.14
5585 A_BomaMG_comp153483_c0_seq1
527bp
PREDICTED:_uncharacterized_protein_LOC101744765_isoform_X1_[Bombyx_mori]
FPKM:2.65 TPM:2.45
5586 A_BomaMG_comp15348_c0_seq1
291bp
hypothetical_protein_KGM_06486_[Danaus_plexippus]
FPKM:0.54 TPM:0.50
5587 A_BomaMG_comp15348_c0_seq2
470bp
hypothetical_protein_KGM_06486_[Danaus_plexippus]
FPKM:1.42 TPM:1.32
5588 A_BomaMG_comp15349_c0_seq1
329bp
FPKM:1.83 TPM:1.69
5589 A_BomaMG_comp15349_c1_seq1
597bp
uncharacterized_protein_Dmoj_GI25723_[Drosophila_mojavensis]
FPKM:1.30 TPM:1.21
5590 A_BomaMG_comp1534_c0_seq1
285bp
ced-6_protein_[Bombyx_mori]
FPKM:0.32 TPM:0.30
5591 A_BomaMG_comp153512_c0_seq1
437bp
hypothetical_protein_[Prevotella_intermedia]
FPKM:1.59 TPM:1.47
5592 A_BomaMG_comp15351_c0_seq1
281bp
FPKM:1.33 TPM:1.23
5593 A_BomaMG_comp15355_c0_seq1
266bp
FPKM:1.94 TPM:1.79
5594 A_BomaMG_comp15356_c0_seq1
544bp
PREDICTED:_protein_lingerer_isoform_X2_[Bombyx_mori]
GO:0000932 C P-body
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007610 P behavior
GO:0007620 P copulation
GO:0008069 P dorsal/ventral axis specification, ovarian follicular epithelium
GO:0045571 P negative regulation of imaginal disc growth
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0060179 P male mating behavior
FPKM:7.11 TPM:6.58
5595 A_BomaMG_comp15357_c0_seq1
448bp
AC079027_4_hypothetical_protein_[Arabidopsis_thaliana]
FPKM:1.65 TPM:1.53
5596 A_BomaMG_comp15358_c0_seq1
225bp
FPKM:1.33 TPM:1.23
5597 A_BomaMG_comp153592_c0_seq1
224bp
FPKM:5.41 TPM:5.01
5598 A_BomaMG_comp15362_c0_seq1
1010bp
PREDICTED:_protein_purity_of_essence_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
FPKM:2.17 TPM:2.00
5599 A_BomaMG_comp15363_c0_seq1
697bp
PREDICTED:_uncharacterized_protein_LOC105842354_[Bombyx_mori]
FPKM:1.25 TPM:1.16
5600 A_BomaMG_comp15364_c0_seq1
425bp
PREDICTED:_ATP-dependent_RNA_helicase_DDX42_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008104 P protein localization
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
FPKM:2.23 TPM:2.06
5601 A_BomaMG_comp15367_c0_seq1
340bp
hypothetical_protein_BRAFLDRAFT_99698_[Branchiostoma_floridae]
FPKM:1.28 TPM:1.18
5602 A_BomaMG_comp15369_c0_seq1
363bp
PREDICTED:_uncharacterized_protein_LOC106115327_[Papilio_xuthus]
FPKM:0.75 TPM:0.69
5603 A_BomaMG_comp1536_c0_seq1
229bp
hypothetical_protein_V498_02939_[Pseudogymnoascus_sp._VKM_F-4517_(FW-2822)]
FPKM:0.00 TPM:0.00
5604 A_BomaMG_comp15371_c0_seq1
285bp
FPKM:1.29 TPM:1.19
5605 A_BomaMG_comp15372_c0_seq1
296bp
FPKM:1.46 TPM:1.35
5606 A_BomaMG_comp15373_c0_seq1
282bp
PREDICTED:_DNA_polymerase_alpha_catalytic_subunit_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001882 F nucleoside binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004527 F exonuclease activity
GO:0005634 C nucleus
GO:0005658 C alpha DNA polymerase:primase complex
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.32 TPM:1.22
5607 A_BomaMG_comp15373_c1_seq1
549bp
PREDICTED:_DNA_polymerase_alpha_catalytic_subunit_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0000785 C chromatin
GO:0001882 F nucleoside binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003896 F DNA primase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005658 C alpha DNA polymerase:primase complex
GO:0005730 C nucleolus
GO:0006260 P DNA replication
GO:0006269 P DNA replication, synthesis of RNA primer
GO:0006270 P DNA replication initiation
GO:0006271 P DNA strand elongation involved in DNA replication
GO:0006272 P leading strand elongation
GO:0006273 P lagging strand elongation
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0008283 P cell population proliferation
GO:0008408 F 3'-5' exonuclease activity
GO:0016363 C nuclear matrix
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.66 TPM:1.54
5608 A_BomaMG_comp153745_c0_seq1
2785bp
hypothetical_protein_KGM_08735_[Danaus_plexippus]
FPKM:1.83 TPM:1.70
5609 A_BomaMG_comp15374_c0_seq1
371bp
FPKM:1.43 TPM:1.32
5610 A_BomaMG_comp15375_c0_seq1
370bp
PREDICTED:_uncharacterized_protein_LOC105841936_[Bombyx_mori]
FPKM:1.08 TPM:1.00
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