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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5191 A_BomaMG_comp1501_c0_seq1
214bp
FPKM:2.42 TPM:2.24
5192 A_BomaMG_comp15021_c0_seq1
720bp
PREDICTED:_AP-3_complex_subunit_delta_[Bombyx_mori]
FPKM:13.77 TPM:12.75
5193 A_BomaMG_comp15022_c0_seq1
684bp
FPKM:1.08 TPM:1.00
5194 A_BomaMG_comp15024_c0_seq1
637bp
PREDICTED:_carboxypeptidase_D_isoform_X3_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0004181 F metallocarboxypeptidase activity
GO:0004185 F serine-type carboxypeptidase activity
GO:0005516 F calmodulin binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006518 P peptide metabolic process
GO:0008270 F zinc ion binding
GO:0016485 P protein processing
FPKM:1.41 TPM:1.31
5195 A_BomaMG_comp150250_c0_seq1
367bp
FPKM:2.01 TPM:1.86
5196 A_BomaMG_comp150251_c0_seq1
702bp
FPKM:1.95 TPM:1.81
5197 A_BomaMG_comp15025_c0_seq1
503bp
FPKM:1.27 TPM:1.17
5198 A_BomaMG_comp15027_c0_seq1
387bp
PREDICTED:_activin_receptor_type-2B-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004675 F transmembrane receptor protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007178 P transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0023014 P signal transduction
FPKM:1.98 TPM:1.83
5199 A_BomaMG_comp150282_c0_seq1
301bp
hypothetical_protein_CLF_100751_[Clonorchis_sinensis]
FPKM:1.12 TPM:1.04
5200 A_BomaMG_comp15029_c0_seq1
267bp
FPKM:0.77 TPM:0.71
5201 A_BomaMG_comp15030_c0_seq1
216bp
hypothetical_protein_AS361_10710_[Myroides_marinus]
FPKM:0.78 TPM:0.72
5202 A_BomaMG_comp150326_c0_seq1
329bp
FPKM:2.75 TPM:2.54
5203 A_BomaMG_comp15032_c0_seq1
1277bp
PREDICTED:_CLK4-associating_serine/arginine_rich_protein_[Papilio_polytes]
FPKM:3.37 TPM:3.12
5204 A_BomaMG_comp15032_c1_seq1
460bp
CLK4-associating_serine/arginine_rich_protein_[Papilio_xuthus]
FPKM:1.58 TPM:1.47
5205 A_BomaMG_comp15033_c0_seq1
713bp
PREDICTED:_endoribonuclease_Dcr-1-like_isoform_X1_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0003727 F single-stranded RNA binding
GO:0004386 F helicase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0004530 F deoxyribonuclease I activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006309 P apoptotic DNA fragmentation
GO:0006396 P RNA processing
GO:0007279 P pole cell formation
GO:0007294 P germarium-derived oocyte fate determination
GO:0007367 P segment polarity determination
GO:0016246 P RNA interference
GO:0016442 C RISC complex
GO:0016443 F bidentate ribonuclease III activity
GO:0016787 F hydrolase activity
GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters
GO:0030422 P production of siRNA involved in RNA interference
GO:0030727 P germarium-derived female germ-line cyst formation
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0033227 P dsRNA transport
GO:0035087 P siRNA loading onto RISC involved in RNA interference
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042078 P germ-line stem cell division
GO:0042594 P response to starvation
GO:0045448 P mitotic cell cycle, embryonic
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0070883 F pre-miRNA binding
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
FPKM:1.85 TPM:1.71
5206 A_BomaMG_comp150344_c0_seq1
507bp
PREDICTED:_dynactin_subunit_1_[Bombyx_mori]
GO:0000776 C kinetochore
GO:0001709 P cell fate determination
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0001754 P eye photoreceptor cell differentiation
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005818 C aster
GO:0005828 C kinetochore microtubule
GO:0005856 C cytoskeleton
GO:0005869 C dynactin complex
GO:0005874 C microtubule
GO:0005876 C spindle microtubule
GO:0006886 P intracellular protein transport
GO:0007018 P microtubule-based movement
GO:0007052 P mitotic spindle organization
GO:0007067 P mitotic cell cycle
GO:0007349 P cellularization
GO:0008090 P retrograde axonal transport
GO:0010970 P transport along microtubule
GO:0016330 P second mitotic wave involved in compound eye morphogenesis
GO:0022008 P neurogenesis
GO:0030286 C dynein complex
GO:0030496 C midbody
GO:0031616 C spindle pole centrosome
GO:0034501 P protein localization to kinetochore
GO:0035011 P melanotic encapsulation of foreign target
GO:0035371 C microtubule plus-end
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045502 F dynein complex binding
GO:0047497 P mitochondrion transport along microtubule
GO:0048477 P oogenesis
GO:0048491 P retrograde synaptic vesicle transport
GO:0048675 P axon extension
GO:0051028 P mRNA transport
GO:0051225 P spindle assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051299 P centrosome separation
GO:0051383 P kinetochore organization
GO:0051642 P centrosome localization
GO:0070840 F dynein complex binding
GO:1904115 C axon cytoplasm
FPKM:3.02 TPM:2.80
5207 A_BomaMG_comp15035_c0_seq1
794bp
PREDICTED:_uncharacterized_protein_LOC101735819_isoform_X2_[Bombyx_mori]
FPKM:0.40 TPM:0.37
5208 A_BomaMG_comp15035_c0_seq2
809bp
PREDICTED:_uncharacterized_protein_LOC101735819_isoform_X2_[Bombyx_mori]
FPKM:1.01 TPM:0.94
5209 A_BomaMG_comp150369_c0_seq1
349bp
FPKM:3.03 TPM:2.80
5210 A_BomaMG_comp15036_c0_seq1
360bp
Histone_acetyltransferase_MYST3_[Papilio_xuthus]
FPKM:1.33 TPM:1.23
5211 A_BomaMG_comp150370_c0_seq1
447bp
RNase_H_and_integrase-like_protein_[Bombyx_mori]
FPKM:2.43 TPM:2.25
5212 A_BomaMG_comp15039_c0_seq1
729bp
PREDICTED:_uncharacterized_protein_LOC101741433_[Bombyx_mori]
FPKM:2.10 TPM:1.95
5213 A_BomaMG_comp15040_c0_seq1
337bp
FPKM:1.96 TPM:1.81
5214 A_BomaMG_comp15041_c0_seq1
483bp
PREDICTED:_protein_SREK1IP1-like_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0046872 F metal ion binding
FPKM:1.69 TPM:1.56
5215 A_BomaMG_comp150450_c0_seq1
539bp
FPKM:2.37 TPM:2.19
5216 A_BomaMG_comp150453_c0_seq1
322bp
PREDICTED:_dof_zinc_finger_protein_DOF3.5-like_[Glycine_max]
FPKM:3.12 TPM:2.89
5217 A_BomaMG_comp150468_c0_seq1
1569bp
Protein_distal_antenna_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007379 P segment specification
GO:0007469 P antennal development
GO:0048749 P compound eye development
FPKM:1.85 TPM:1.72
5218 A_BomaMG_comp15046_c0_seq1
482bp
FPKM:0.56 TPM:0.52
5219 A_BomaMG_comp15047_c0_seq1
217bp
FPKM:0.76 TPM:0.71
5220 A_BomaMG_comp15051_c0_seq1
454bp
FPKM:1.62 TPM:1.50
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