SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search Assembled RNA-Seq

previous next from show/39865
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5161 A_BomaMG_comp149998_c0_seq1
1023bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X3_[Bombyx_mori]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:2.25 TPM:2.09
5162 A_BomaMG_comp14999_c0_seq1
518bp
PREDICTED:_uncharacterized_protein_LOC105842641_[Bombyx_mori]
FPKM:1.01 TPM:0.93
5163 A_BomaMG_comp1499_c0_seq1
234bp
PREDICTED:_probable_tRNA_(uracil-O(2)-)-methyltransferase,_partial_[Bombyx_mori]
FPKM:1.73 TPM:1.61
5164 A_BomaMG_comp150000_c0_seq1
528bp
FPKM:1.96 TPM:1.81
5165 A_BomaMG_comp150003_c0_seq1
254bp
PREDICTED:_uncharacterized_protein_CG1785_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0022008 P neurogenesis
FPKM:7.09 TPM:6.57
5166 A_BomaMG_comp15000_c0_seq1
662bp
FPKM:1.55 TPM:1.44
5167 A_BomaMG_comp15002_c0_seq1
202bp
FPKM:4.13 TPM:3.82
5168 A_BomaMG_comp15003_c0_seq1
600bp
PREDICTED:_uncharacterized_protein_LOC101738302_[Bombyx_mori]
FPKM:0.42 TPM:0.39
5169 A_BomaMG_comp15003_c0_seq2
430bp
PREDICTED:_uncharacterized_protein_LOC101738302_[Bombyx_mori]
FPKM:0.93 TPM:0.86
5170 A_BomaMG_comp150048_c0_seq1
461bp
endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
FPKM:2.43 TPM:2.25
5171 A_BomaMG_comp15004_c0_seq1
241bp
hypothetical_protein_V490_09349_[Pseudogymnoascus_sp._VKM_F-3557]
FPKM:3.14 TPM:2.91
5172 A_BomaMG_comp15006_c0_seq1
1900bp
PREDICTED:_uncharacterized_protein_LOC106117785_isoform_X2_[Papilio_xuthus]
FPKM:6.00 TPM:5.56
5173 A_BomaMG_comp15006_c0_seq2
710bp
PREDICTED:_uncharacterized_protein_LOC101743410_[Bombyx_mori]
FPKM:1.34 TPM:1.24
5174 A_BomaMG_comp150076_c0_seq1
1023bp
PREDICTED:_transcription_factor_Sp4-like_isoform_X2_[Bombyx_mori]
FPKM:2.01 TPM:1.86
5175 A_BomaMG_comp15007_c0_seq1
384bp
hypothetical_protein_HETIRDRAFT_173693_[Heterobasidion_irregulare_TC_32-1]
FPKM:1.84 TPM:1.70
5176 A_BomaMG_comp15008_c0_seq1
588bp
FPKM:1.75 TPM:1.62
5177 A_BomaMG_comp15008_c1_seq1
355bp
FPKM:1.95 TPM:1.81
5178 A_BomaMG_comp150099_c0_seq1
802bp
FPKM:1.69 TPM:1.57
5179 A_BomaMG_comp15010_c0_seq1
250bp
PREDICTED:_uncharacterized_protein_LOC105842919,_partial_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005768 C endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:1990126 P endocytic recycling
FPKM:1.40 TPM:1.29
5180 A_BomaMG_comp15010_c1_seq1
400bp
PREDICTED:_uncharacterized_protein_LOC105842919,_partial_[Bombyx_mori]
FPKM:1.40 TPM:1.29
5181 A_BomaMG_comp15012_c0_seq1
436bp
PREDICTED:_rhophilin-2-B-like_isoform_X3_[Plutella_xylostella]
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
FPKM:1.07 TPM:0.99
5182 A_BomaMG_comp15013_c0_seq1
276bp
FPKM:2.45 TPM:2.27
5183 A_BomaMG_comp15014_c0_seq1
770bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101742799_[Bombyx_mori]
GO:0006718 P juvenile hormone biosynthetic process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0019010 F farnesoic acid O-methyltransferase activity
GO:0032259 P methylation
GO:0035049 F juvenile hormone acid methyltransferase activity
FPKM:0.98 TPM:0.91
5184 A_BomaMG_comp150154_c0_seq1
282bp
PREDICTED:_epiplakin,_partial_[Pelodiscus_sinensis]
FPKM:3.63 TPM:3.36
5185 A_BomaMG_comp15015_c0_seq1
533bp
peptidase_S9_[Herbidospora_cretacea]
FPKM:1.23 TPM:1.14
5186 A_BomaMG_comp15015_c0_seq2
520bp
putative_NS5B_peptide_[Human_pegivirus_2]
FPKM:0.23 TPM:0.21
5187 A_BomaMG_comp15016_c0_seq1
212bp
hypothetical_protein_DAPPUDRAFT_57230_[Daphnia_pulex]
FPKM:1.68 TPM:1.55
5188 A_BomaMG_comp15017_c0_seq1
2101bp
PREDICTED:_conserved_oligomeric_Golgi_complex_subunit_6_[Amyelois_transitella]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006891 P intra-Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017119 C Golgi transport complex
GO:0019233 P sensory perception of pain
FPKM:4.22 TPM:3.91
5189 A_BomaMG_comp15018_c0_seq1
226bp
Chromosome_transmission_fidelity_protein_18-like_[Papilio_machaon]
FPKM:0.65 TPM:0.61
5190 A_BomaMG_comp150193_c0_seq1
431bp
PREDICTED:_zinc_finger_protein_Xfin-like_[Bombyx_mori]
FPKM:1.22 TPM:1.13
previous next from show/39865

- SilkBase 1999-2023 -