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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
5131 A_BomaMG_comp14971_c1_seq1
231bp
hypothetical_protein_GGTG_06148_[Gaeumannomyces_graminis_var._tritici_R3-111a-1]
FPKM:2.42 TPM:2.24
5132 A_BomaMG_comp14973_c0_seq1
984bp
PREDICTED:_G_patch_domain_and_ankyrin_repeat-containing_protein_1_homolog_[Papilio_machaon]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:4.89 TPM:4.53
5133 A_BomaMG_comp14975_c0_seq1
1053bp
PREDICTED:_deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050776 P regulation of immune response
GO:2000026 P regulation of multicellular organismal development
FPKM:1.48 TPM:1.37
5134 A_BomaMG_comp14975_c1_seq1
317bp
PREDICTED:_deformed_epidermal_autoregulatory_factor_1_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0008270 F zinc ion binding
GO:0009792 P embryo development ending in birth or egg hatching
GO:0043565 F sequence-specific DNA binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050776 P regulation of immune response
GO:2000026 P regulation of multicellular organismal development
FPKM:2.49 TPM:2.30
5135 A_BomaMG_comp14977_c0_seq1
257bp
FPKM:0.43 TPM:0.40
5136 A_BomaMG_comp14978_c0_seq1
850bp
FPKM:1.06 TPM:0.98
5137 A_BomaMG_comp149809_c0_seq1
551bp
FPKM:2.29 TPM:2.12
5138 A_BomaMG_comp14981_c0_seq1
225bp
FPKM:2.66 TPM:2.46
5139 A_BomaMG_comp14982_c0_seq1
300bp
FPKM:1.13 TPM:1.05
5140 A_BomaMG_comp14984_c0_seq1
269bp
FPKM:0.75 TPM:0.69
5141 A_BomaMG_comp149853_c0_seq1
242bp
gag-like_protein_[Bombyx_mori]
FPKM:3.09 TPM:2.86
5142 A_BomaMG_comp149857_c0_seq1
1348bp
PREDICTED:_E3_ubiquitin-protein_ligase_MIB1_[Bombyx_mori]
GO:0001568 P blood vessel development
GO:0001701 P in utero embryonic development
GO:0001756 P somitogenesis
GO:0001841 P neural tube formation
GO:0001947 P heart looping
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006897 P endocytosis
GO:0007219 P Notch signaling pathway
GO:0007507 P heart development
GO:0008270 F zinc ion binding
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031410 C cytoplasmic vesicle
GO:0045665 P negative regulation of neuron differentiation
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
FPKM:1.65 TPM:1.53
5143 A_BomaMG_comp14985_c0_seq1
260bp
FPKM:2.48 TPM:2.30
5144 A_BomaMG_comp149867_c0_seq1
470bp
PREDICTED:_zinc_finger_protein_26-like_[Amyelois_transitella]
FPKM:2.12 TPM:1.96
5145 A_BomaMG_comp14988_c0_seq1
323bp
hypothetical_protein_HMPREF1043_0707_[Streptococcus_anginosus_subsp._whileyi_CCUG_39159]
FPKM:2.14 TPM:1.99
5146 A_BomaMG_comp14989_c0_seq1
457bp
PREDICTED:_rapamycin-insensitive_companion_of_mTOR_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0008047 F enzyme activator activity
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0018105 P peptidyl-serine phosphorylation
GO:0019901 F protein kinase binding
GO:0030010 P establishment of cell polarity
GO:0030838 P positive regulation of actin filament polymerization
GO:0030950 P establishment or maintenance of actin cytoskeleton polarity
GO:0031295 P T cell costimulation
GO:0031532 P actin cytoskeleton reorganization
GO:0031929 P TOR signaling
GO:0031932 C TORC2 complex
GO:0032008 P positive regulation of TOR signaling
GO:0032956 P regulation of actin cytoskeleton organization
GO:0033135 P regulation of peptidyl-serine phosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043022 F ribosome binding
GO:0043085 P positive regulation of catalytic activity
GO:0043087 P regulation of GTPase activity
GO:0048015 P phosphatidylinositol-mediated signaling
GO:0050727 P regulation of inflammatory response
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:2000114 P regulation of establishment of cell polarity
FPKM:1.35 TPM:1.25
5147 A_BomaMG_comp14989_c1_seq1
358bp
FPKM:1.34 TPM:1.24
5148 A_BomaMG_comp1498_c0_seq1
277bp
FPKM:1.04 TPM:0.96
5149 A_BomaMG_comp149918_c0_seq1
700bp
PREDICTED:_uncharacterized_protein_LOC101745407_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:1.83 TPM:1.69
5150 A_BomaMG_comp14992_c0_seq1
352bp
FPKM:1.98 TPM:1.84
5151 A_BomaMG_comp149932_c0_seq1
438bp
FPKM:2.25 TPM:2.08
5152 A_BomaMG_comp149936_c0_seq1
1486bp
PREDICTED:_aldehyde_dehydrogenase_X,_mitochondrial-like_[Amyelois_transitella]
GO:0004029 F aldehyde dehydrogenase (NAD+) activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006068 P ethanol catabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0043231 C intracellular membrane-bounded organelle
GO:0055114 P obsolete oxidation-reduction process
FPKM:1.84 TPM:1.71
5153 A_BomaMG_comp14993_c0_seq1
349bp
PREDICTED:_putative_transcription_factor_capicua_[Bombyx_mori]
FPKM:1.82 TPM:1.68
5154 A_BomaMG_comp149951_c0_seq1
220bp
PREDICTED:_filaggrin-2-like_[Bombyx_mori]
FPKM:6.92 TPM:6.41
5155 A_BomaMG_comp149967_c0_seq1
653bp
hypothetical_protein_[Pseudomonas_sp._Os17]
FPKM:1.87 TPM:1.73
5156 A_BomaMG_comp14996_c0_seq1
384bp
FPKM:1.51 TPM:1.39
5157 A_BomaMG_comp149975_c0_seq1
352bp
FPKM:1.59 TPM:1.47
5158 A_BomaMG_comp14997_c0_seq1
695bp
chemosensory_protein_6_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007552 P metamorphosis
GO:0007610 P behavior
GO:0009615 P response to virus
GO:0045297 P obsolete post-mating behavior
FPKM:3.50 TPM:3.24
5159 A_BomaMG_comp14998_c0_seq1
351bp
FPKM:0.80 TPM:0.74
5160 A_BomaMG_comp149996_c0_seq1
616bp
PREDICTED:_protein_fem-1_homolog_CG6966_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0045202 C synapse
GO:0072318 P clathrin coat disassembly
GO:0097481 C postsynaptic density
GO:2000369 P regulation of clathrin-dependent endocytosis
FPKM:3.12 TPM:2.89
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