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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

5101

A_BomaMG_comp14948_c1_seq1

250bp

FPKM:1.40 TPM:1.29

5102

A_BomaMG_comp14949_c0_seq1

371bp

PREDICTED:_multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]

GO:0003143	P	embryonic heart tube morphogenesis
GO:0005509	F	calcium ion binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0007368	P	determination of left/right symmetry
GO:0010468	P	regulation of gene expression
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030326	P	embryonic limb morphogenesis
GO:0030509	P	BMP signaling pathway
GO:0035108	P	limb morphogenesis
GO:0042074	P	cell migration involved in gastrulation
GO:0048704	P	embryonic skeletal system morphogenesis
GO:0048842	P	positive regulation of axon extension involved in axon guidance
GO:0055113	P	epiboly involved in gastrulation with mouth forming second
GO:0060971	P	embryonic heart tube left/right pattern formation
GO:0060972	P	left/right pattern formation
GO:0060976	P	coronary vasculature development
GO:0061371	P	determination of heart left/right asymmetry
GO:0070062	C	extracellular exosome
GO:0071907	P	determination of digestive tract left/right asymmetry
GO:0097094	P	craniofacial suture morphogenesis
GO:0097155	P	fasciculation of sensory neuron axon

FPKM:1.61 TPM:1.49

5103

A_BomaMG_comp14950_c0_seq1

322bp

putative_lipase_[Bombyx_mori]

GO:0004620	F	phospholipase activity
GO:0004806	F	triglyceride lipase activity
GO:0005509	F	calcium ion binding
GO:0005576	C	extracellular region
GO:0005615	C	extracellular space
GO:0006629	P	lipid metabolic process
GO:0009395	P	phospholipid catabolic process
GO:0016042	P	lipid catabolic process
GO:0016787	F	hydrolase activity
GO:0019376	P	galactolipid catabolic process
GO:0046872	F	metal ion binding
GO:0047372	F	acylglycerol lipase activity
GO:0047714	F	galactolipase activity
GO:0052689	F	carboxylic ester hydrolase activity

FPKM:1.44 TPM:1.33

5104

A_BomaMG_comp14951_c0_seq1

276bp

probable_aldehyde_dehydrogenase_[Piriformospora_indica_DSM_11827]

FPKM:7.34 TPM:6.80

5105

A_BomaMG_comp14952_c0_seq1

571bp

hypothetical_protein_glysoja_034123_[Glycine_soja]

FPKM:1.48 TPM:1.37

5106

A_BomaMG_comp14953_c0_seq1

407bp

PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_isoform_X5_[Bombyx_mori]

GO:0000781	C	chromosome, telomeric region
GO:0005634	C	nucleus
GO:0006342	P	heterochromatin assembly
GO:0006348	P	subtelomeric heterochromatin assembly
GO:0008168	F	methyltransferase activity
GO:0016568	P	chromatin organization
GO:0016571	P	histone methylation
GO:0016740	F	transferase activity
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0030702	P	pericentric heterochromatin assembly
GO:0031151	F	histone methyltransferase activity (H3-K79 specific)
GO:0032259	P	methylation
GO:0034729	P	histone H3-K79 methylation
GO:0035097	C	histone methyltransferase complex
GO:0046331	P	lateral inhibition
GO:0048096	P	epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726	P	regulation of cell cycle
GO:2000637	P	positive regulation of gene silencing by miRNA

FPKM:1.65 TPM:1.53

5107

A_BomaMG_comp149547_c0_seq1

766bp

PREDICTED:_uncharacterized_protein_LOC106102998_[Papilio_polytes]

FPKM:2.49 TPM:2.31

5108

A_BomaMG_comp14954_c0_seq1

279bp

FPKM:1.36 TPM:1.26

5109

A_BomaMG_comp149557_c0_seq1

633bp

FPKM:2.40 TPM:2.22

5110

A_BomaMG_comp149568_c0_seq1

1865bp

PREDICTED:_tRNA-dihydrouridine(47)_synthase_[NAD(P)(+)]-like_[Amyelois_transitella]

GO:0002943	P	tRNA dihydrouridine synthesis
GO:0003824	F	catalytic activity
GO:0008033	P	tRNA processing
GO:0016491	F	oxidoreductase activity
GO:0017150	F	tRNA dihydrouridine synthase activity
GO:0046872	F	metal ion binding
GO:0050660	F	flavin adenine dinucleotide binding
GO:0055114	P	obsolete oxidation-reduction process

FPKM:1.71 TPM:1.58

5111

A_BomaMG_comp14957_c0_seq1

342bp

FPKM:1.68 TPM:1.56

5112

A_BomaMG_comp14959_c0_seq1

321bp

FPKM:1.21 TPM:1.12

5113

A_BomaMG_comp149606_c0_seq1

314bp

PREDICTED:_myotubularin-related_protein_5_[Bombyx_mori]

GO:0005085	F	guanyl-nucleotide exchange factor activity
GO:0005737	C	cytoplasm
GO:0016020	C	membrane
GO:0019208	F	phosphatase regulator activity
GO:0043087	P	regulation of GTPase activity
GO:0043547	P	positive regulation of GTPase activity

FPKM:3.05 TPM:2.82

5114

A_BomaMG_comp149612_c0_seq1

665bp

FPKM:2.17 TPM:2.01

5115

A_BomaMG_comp149619_c0_seq1

589bp

PREDICTED:_nuclear_orphan_receptor_isoform_X2_[Bombyx_mori]

GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0003707	F	steroid hormone receptor activity
GO:0004879	F	nuclear receptor activity
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007424	P	open tracheal system development
GO:0008270	F	zinc ion binding
GO:0022008	P	neurogenesis
GO:0030522	P	intracellular receptor signaling pathway
GO:0035002	P	liquid clearance, open tracheal system
GO:0035071	P	salivary gland cell autophagic cell death
GO:0043401	P	steroid hormone mediated signaling pathway
GO:0043565	F	sequence-specific DNA binding
GO:0045089	P	positive regulation of innate immune response
GO:0046872	F	metal ion binding
GO:0048102	P	autophagic cell death
GO:0050829	P	defense response to Gram-negative bacterium

FPKM:2.25 TPM:2.08

5116

A_BomaMG_comp14961_c0_seq1

232bp

PREDICTED:_uncharacterized_protein_LOC105842679_[Bombyx_mori]

FPKM:2.98 TPM:2.76

5117

A_BomaMG_comp149629_c0_seq1

233bp

Membrane-associated_tyrosine-_and_threonine-specific_cdc2-inhibitory_kinase_wee-1.3,_partial_[Trichinella_sp._T6]

FPKM:5.28 TPM:4.89

5118

A_BomaMG_comp14964_c0_seq1

812bp

PREDICTED:_nuclear_pore_complex_protein_Nup205-like_[Papilio_machaon]

GO:0000059	P	obsolete protein import into nucleus, docking
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005635	C	nuclear envelope
GO:0005643	C	nuclear pore
GO:0005654	C	nucleoplasm
GO:0005737	C	cytoplasm
GO:0006406	P	mRNA export from nucleus
GO:0006409	P	tRNA export from nucleus
GO:0006810	P	transport
GO:0006913	P	nucleocytoplasmic transport
GO:0007077	P	mitotic nuclear membrane disassembly
GO:0010827	P	regulation of glucose transmembrane transport
GO:0015031	P	protein transport
GO:0016020	C	membrane
GO:0016032	P	viral process
GO:0016925	P	protein sumoylation
GO:0017056	F	structural constituent of nuclear pore
GO:0019083	P	viral transcription
GO:0031047	P	gene silencing by RNA
GO:0031965	C	nuclear membrane
GO:0034399	C	nuclear periphery
GO:0044611	C	nuclear pore inner ring
GO:0051028	P	mRNA transport
GO:0051292	P	nuclear pore complex assembly
GO:0075733	P	intracellular transport of virus
GO:1900034	P	regulation of cellular response to heat

FPKM:2.74 TPM:2.54

5119

A_BomaMG_comp149656_c0_seq1

1206bp

FPKM:1.62 TPM:1.50

5120

A_BomaMG_comp149657_c0_seq1

698bp

FPKM:2.10 TPM:1.94

5121

A_BomaMG_comp149658_c0_seq1

774bp

PREDICTED:_venom_acid_phosphatase_Acph-1-like_isoform_X1_[Bombyx_mori]

GO:0003993	F	acid phosphatase activity
GO:0005576	C	extracellular region
GO:0008152	P	metabolic process
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity

FPKM:1.49 TPM:1.38

5122

A_BomaMG_comp14965_c0_seq1

616bp

PREDICTED:_phosphatidylinositide_phosphatase_SAC2_isoform_X2_[Bombyx_mori]

GO:0001921	P	positive regulation of receptor recycling
GO:0005515	F	protein binding
GO:0005622	C	intracellular anatomical structure
GO:0005768	C	endosome
GO:0005769	C	early endosome
GO:0005905	C	clathrin-coated pit
GO:0006661	P	phosphatidylinositol biosynthetic process
GO:0008934	F	inositol monophosphate 1-phosphatase activity
GO:0014898	P	cardiac muscle hypertrophy in response to stress
GO:0016020	C	membrane
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0030487	F	inositol-4,5-bisphosphate 5-phosphatase activity
GO:0031161	P	phosphatidylinositol catabolic process
GO:0031901	C	early endosome membrane
GO:0034595	F	phosphatidylinositol phosphate 5-phosphatase activity
GO:0034596	F	phosphatidylinositol phosphate 4-phosphatase activity
GO:0042518	P	negative regulation of tyrosine phosphorylation of STAT protein
GO:0042578	F	phosphoric ester hydrolase activity
GO:0042803	F	protein homodimerization activity
GO:0045334	C	clathrin-coated endocytic vesicle
GO:0046856	P	phosphatidylinositol dephosphorylation
GO:0048015	P	phosphatidylinositol-mediated signaling
GO:0048681	P	negative regulation of axon regeneration
GO:0051896	P	regulation of protein kinase B signaling
GO:0052832	F	inositol monophosphate 3-phosphatase activity
GO:0052833	F	inositol monophosphate 4-phosphatase activity
GO:0052834	F	inositol monophosphate phosphatase activity
GO:0055037	C	recycling endosome
GO:0072583	P	clathrin-dependent endocytosis
GO:2000145	P	regulation of cell motility
GO:2001135	P	regulation of endocytic recycling