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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4831 A_BomaMG_comp14721_c0_seq1
379bp
FPKM:1.72 TPM:1.59
4832 A_BomaMG_comp14722_c0_seq1
440bp
PREDICTED:_uncharacterized_protein_LOC101740264_[Bombyx_mori]
FPKM:1.18 TPM:1.09
4833 A_BomaMG_comp14723_c0_seq1
279bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_spindle-E_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
FPKM:1.36 TPM:1.26
4834 A_BomaMG_comp14723_c1_seq1
331bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_spindle-E_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0046872 F metal ion binding
GO:0051321 P meiotic cell cycle
FPKM:0.68 TPM:0.63
4835 A_BomaMG_comp14724_c0_seq1
302bp
hypothetical_protein_H101_01313_[Trichophyton_interdigitale_H6]
FPKM:1.95 TPM:1.80
4836 A_BomaMG_comp14724_c1_seq1
342bp
PREDICTED:_uncharacterized_protein_LOC101742325_[Bombyx_mori]
FPKM:1.68 TPM:1.56
4837 A_BomaMG_comp14725_c0_seq1
277bp
FPKM:0.69 TPM:0.64
4838 A_BomaMG_comp14727_c0_seq1
527bp
PREDICTED:_neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001952 P regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0021897 P forebrain astrocyte development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0042060 P wound healing
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045545 F syndecan binding
GO:0045664 P regulation of neuron differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
FPKM:1.47 TPM:1.36
4839 A_BomaMG_comp14728_c0_seq1
576bp
FPKM:1.20 TPM:1.11
4840 A_BomaMG_comp14729_c0_seq1
511bp
FPKM:1.23 TPM:1.14
4841 A_BomaMG_comp1472_c0_seq1
363bp
FPKM:1.31 TPM:1.21
4842 A_BomaMG_comp14730_c0_seq1
333bp
PREDICTED:_uncharacterized_protein_LOC107192997_[Dufourea_novaeangliae]
FPKM:1.34 TPM:1.24
4843 A_BomaMG_comp14732_c0_seq1
336bp
FPKM:1.75 TPM:1.62
4844 A_BomaMG_comp14733_c0_seq1
234bp
D-mannonate_oxidoreductase_[Dysgonomonas_sp._BGC7]
FPKM:2.31 TPM:2.14
4845 A_BomaMG_comp14735_c0_seq1
426bp
PREDICTED:_nitrogen_permease_regulator_3-like_protein_[Bombyx_mori]
FPKM:1.80 TPM:1.67
4846 A_BomaMG_comp14735_c1_seq1
410bp
PREDICTED:_nitrogen_permease_regulator_3-like_protein_[Bombyx_mori]
FPKM:1.48 TPM:1.37
4847 A_BomaMG_comp14736_c0_seq1
270bp
hypothetical_protein_C922_02540_[Plasmodium_inui_San_Antonio_1]
FPKM:2.23 TPM:2.06
4848 A_BomaMG_comp147371_c0_seq1
428bp
PREDICTED:_zinc_finger_protein_628_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.75 TPM:2.55
4849 A_BomaMG_comp14737_c0_seq1
352bp
PREDICTED:_uncharacterized_protein_LOC105842941_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:1.59 TPM:1.47
4850 A_BomaMG_comp14739_c0_seq1
276bp
FPKM:0.35 TPM:0.32
4851 A_BomaMG_comp1473_c0_seq1
229bp
PREDICTED:_tyrosine-protein_kinase_Src64B_isoform_X1_[Bombyx_mori]
FPKM:1.87 TPM:1.73
4852 A_BomaMG_comp14741_c0_seq1
839bp
PREDICTED:_semaphorin-5B_isoform_X1_[Bombyx_mori]
GO:0001755 P neural crest cell migration
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0030215 F semaphorin receptor binding
GO:0030335 P positive regulation of cell migration
GO:0045499 F chemorepellent activity
GO:0048675 P axon extension
GO:0048843 P negative regulation of axon extension involved in axon guidance
GO:0050908 P detection of light stimulus involved in visual perception
GO:0050919 P negative chemotaxis
GO:0071526 P semaphorin-plexin signaling pathway
GO:0097485 P neuron projection guidance
GO:1990138 P neuron projection extension
FPKM:1.24 TPM:1.14
4853 A_BomaMG_comp14742_c0_seq1
543bp
Modifier_of_mdg4_[Operophtera_brumata]
FPKM:0.94 TPM:0.87
4854 A_BomaMG_comp147441_c0_seq1
240bp
hypothetical_protein_[Ornithinibacillus_scapharcae]
FPKM:0.00 TPM:0.00
4855 A_BomaMG_comp14744_c0_seq1
231bp
GD20371_[Drosophila_simulans]
FPKM:1.21 TPM:1.12
4856 A_BomaMG_comp14747_c0_seq1
271bp
hypothetical_protein_KGM_21874_[Danaus_plexippus]
FPKM:1.10 TPM:1.02
4857 A_BomaMG_comp147492_c0_seq1
295bp
4Fe-4S_ferredoxin_[Desulfohalobium_retbaense]
FPKM:3.54 TPM:3.27
4858 A_BomaMG_comp14749_c0_seq1
323bp
FPKM:0.99 TPM:0.92
4859 A_BomaMG_comp14750_c0_seq1
245bp
FPKM:0.99 TPM:0.92
4860 A_BomaMG_comp147515_c0_seq1
984bp
PREDICTED:_E3_ubiquitin-protein_ligase_RNF25_[Amyelois_transitella]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051059 F NF-kappaB binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0061630 F ubiquitin protein ligase activity
FPKM:1.73 TPM:1.60
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