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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4861 A_BomaMG_comp14751_c0_seq1
318bp
PREDICTED:_uncharacterized_protein_LOC101745299_isoform_X2_[Bombyx_mori]
FPKM:1.73 TPM:1.60
4862 A_BomaMG_comp14751_c1_seq1
208bp
PREDICTED:_uncharacterized_protein_LOC101745299_isoform_X1_[Bombyx_mori]
FPKM:0.91 TPM:0.84
4863 A_BomaMG_comp147546_c0_seq1
461bp
FPKM:1.82 TPM:1.68
4864 A_BomaMG_comp14754_c0_seq1
298bp
FPKM:0.57 TPM:0.53
4865 A_BomaMG_comp14755_c0_seq1
203bp
FPKM:2.02 TPM:1.87
4866 A_BomaMG_comp14756_c0_seq1
246bp
embryonic_polarity_protein_dorsal_isoform_A_[Bombyx_mori]
FPKM:3.43 TPM:3.17
4867 A_BomaMG_comp14757_c0_seq1
304bp
putative_RNA-directed_DNA_polymerase_from_transposon_BS_[Operophtera_brumata]
FPKM:1.37 TPM:1.27
4868 A_BomaMG_comp14758_c0_seq1
761bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.11 TPM:1.03
4869 A_BomaMG_comp14759_c0_seq1
339bp
FPKM:0.86 TPM:0.79
4870 A_BomaMG_comp14759_c1_seq1
302bp
FPKM:0.56 TPM:0.52
4871 A_BomaMG_comp14760_c0_seq1
218bp
FPKM:2.25 TPM:2.08
4872 A_BomaMG_comp14763_c0_seq1
802bp
FPKM:1.15 TPM:1.06
4873 A_BomaMG_comp14763_c1_seq1
266bp
FPKM:1.16 TPM:1.08
4874 A_BomaMG_comp14765_c0_seq1
383bp
PREDICTED:_putative_ATP-dependent_RNA_helicase_DHX33_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000182 F rDNA binding
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0033613 F DNA-binding transcription factor binding
GO:0044822 F RNA binding
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:2.19 TPM:2.02
4875 A_BomaMG_comp14767_c0_seq1
766bp
PREDICTED:_biotin--protein_ligase_[Bombyx_mori]
FPKM:1.16 TPM:1.07
4876 A_BomaMG_comp14768_c0_seq1
644bp
PREDICTED:_decapentaplegic_isoform_X1_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0007275 P multicellular organism development
GO:0008083 F growth factor activity
GO:0030154 P cell differentiation
GO:0040007 P growth
FPKM:0.88 TPM:0.81
4877 A_BomaMG_comp1476_c0_seq1
332bp
PREDICTED:_adenylate_kinase_9-like_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004550 F nucleoside diphosphate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006174 P dADP phosphorylation
GO:0006186 P dGDP phosphorylation
GO:0006756 P AMP phosphorylation
GO:0006757 P ATP generation from ADP
GO:0009117 P nucleotide metabolic process
GO:0015949 P nucleobase-containing small molecule interconversion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019205 F nucleobase-containing compound kinase activity
GO:0019206 F nucleoside kinase activity
GO:0031965 C nuclear membrane
GO:0050145 F nucleoside monophosphate kinase activity
GO:0061508 P CDP phosphorylation
GO:0061565 P dAMP phosphorylation
GO:0061566 P CMP phosphorylation
GO:0061567 P dCMP phosphorylation
GO:0061568 P GDP phosphorylation
GO:0061569 P UDP phosphorylation
GO:0061570 P dCDP phosphorylation
GO:0061571 P TDP phosphorylation
FPKM:1.57 TPM:1.45
4878 A_BomaMG_comp14774_c0_seq1
263bp
Salicylate_hydroxylase_[Leucoagaricus_sp._SymC.cos]
FPKM:2.40 TPM:2.22
4879 A_BomaMG_comp14775_c0_seq1
235bp
FPKM:1.14 TPM:1.05
4880 A_BomaMG_comp14775_c1_seq1
441bp
PTS_glucitol_transporter_subunit_III_[Bacillus_smithii]
FPKM:1.44 TPM:1.33
4881 A_BomaMG_comp14777_c0_seq1
241bp
FPKM:0.52 TPM:0.48
4882 A_BomaMG_comp14777_c1_seq1
355bp
FPKM:1.76 TPM:1.63
4883 A_BomaMG_comp14778_c0_seq1
461bp
FPKM:1.09 TPM:1.01
4884 A_BomaMG_comp14780_c0_seq1
1667bp
PREDICTED:_guanine_nucleotide_exchange_factor_subunit_Rich_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003674 F molecular_function
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0007411 P axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017137 F small GTPase binding
GO:0032483 P regulation of Rab protein signal transduction
GO:0034066 C Ric1-Rgp1 guanyl-nucleotide exchange factor complex
GO:0035418 P protein localization to synapse
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043234 C protein-containing complex
GO:0043547 P positive regulation of GTPase activity
GO:0045467 P R7 cell development
GO:0050808 P synapse organization
GO:0060078 P regulation of postsynaptic membrane potential
GO:1903363 P negative regulation of cellular protein catabolic process
FPKM:3.48 TPM:3.23
4885 A_BomaMG_comp14781_c0_seq1
307bp
PREDICTED:_zinc_finger_protein_62_homolog_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007552 P metamorphosis
GO:0010977 P negative regulation of neuron projection development
GO:0035075 P response to ecdysone
GO:0045316 P negative regulation of compound eye photoreceptor development
GO:0046872 F metal ion binding
FPKM:1.87 TPM:1.73
4886 A_BomaMG_comp14782_c0_seq1
543bp
Sodium/potassium-transporting_ATPase_subunit_beta-2_[Papilio_xuthus]
GO:0005391 F P-type sodium:potassium-exchanging transporter activity
GO:0005886 C plasma membrane
GO:0005890 C sodium:potassium-exchanging ATPase complex
GO:0005918 C septate junction
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006813 P potassium ion transport
GO:0006814 P sodium ion transport
GO:0007424 P open tracheal system development
GO:0007605 P sensory perception of sound
GO:0008324 F cation transmembrane transporter activity
GO:0010248 P establishment or maintenance of transmembrane electrochemical gradient
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019991 P septate junction assembly
GO:0030424 C axon
GO:0035151 P regulation of tube size, open tracheal system
GO:0035158 P regulation of tube diameter, open tracheal system
GO:0035159 P regulation of tube length, open tracheal system
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0090662 P transmembrane transport
GO:0098655 P cation transmembrane transport
FPKM:0.94 TPM:0.87
4887 A_BomaMG_comp14783_c0_seq1
443bp
FPKM:1.30 TPM:1.20
4888 A_BomaMG_comp14786_c0_seq1
286bp
FPKM:1.59 TPM:1.47
4889 A_BomaMG_comp147878_c0_seq1
1309bp
PREDICTED:_protein_SMG8_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0045859 P regulation of protein kinase activity
FPKM:2.10 TPM:1.95
4890 A_BomaMG_comp14788_c0_seq1
227bp
PREDICTED:_lisH_domain_and_HEAT_repeat-containing_protein_KIAA1468-like_[Bombyx_mori]
FPKM:2.57 TPM:2.38
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