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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4801 A_BomaMG_comp146903_c0_seq1
1076bp
PREDICTED:_uncharacterized_protein_LOC106712470_[Papilio_machaon]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005007 F fibroblast growth factor-activated receptor activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0008284 P positive regulation of cell population proliferation
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:1.93 TPM:1.79
4802 A_BomaMG_comp146916_c0_seq1
1032bp
PREDICTED:_zinc_finger_protein_658_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
FPKM:2.07 TPM:1.92
4803 A_BomaMG_comp14691_c0_seq1
240bp
FPKM:1.06 TPM:0.98
4804 A_BomaMG_comp14692_c0_seq1
781bp
FPKM:1.58 TPM:1.46
4805 A_BomaMG_comp14693_c0_seq1
967bp
PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:4.46 TPM:4.13
4806 A_BomaMG_comp14693_c0_seq2
1054bp
PREDICTED:_uncharacterized_protein_LOC101737183_[Bombyx_mori]
FPKM:1.22 TPM:1.13
4807 A_BomaMG_comp14696_c0_seq1
243bp
FPKM:2.04 TPM:1.89
4808 A_BomaMG_comp14697_c0_seq1
545bp
PREDICTED:_protein_vav_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007391 P dorsal closure
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007424 P open tracheal system development
GO:0007520 P myoblast fusion
GO:0008360 P regulation of cell shape
GO:0016477 P cell migration
GO:0030676 F guanyl-nucleotide exchange factor activity
GO:0031532 P actin cytoskeleton reorganization
GO:0035011 P melanotic encapsulation of foreign target
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:0072499 P photoreceptor cell axon guidance
GO:0090630 P activation of GTPase activity
FPKM:2.70 TPM:2.50
4809 A_BomaMG_comp14698_c0_seq1
256bp
FPKM:1.30 TPM:1.20
4810 A_BomaMG_comp14699_c0_seq1
215bp
FPKM:0.79 TPM:0.73
4811 A_BomaMG_comp14701_c0_seq1
477bp
Retrotransposable_element_Tf2_155_kDa_protein_type_1_[Papilio_machaon]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.61 TPM:1.49
4812 A_BomaMG_comp14702_c0_seq1
308bp
FPKM:1.06 TPM:0.98
4813 A_BomaMG_comp14702_c1_seq1
231bp
FPKM:1.81 TPM:1.68
4814 A_BomaMG_comp14703_c0_seq1
1713bp
PREDICTED:_probable_glutamine--tRNA_ligase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004819 F glutamine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006425 P glutaminyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0016876 F aminoacyl-tRNA ligase activity
GO:0017101 C aminoacyl-tRNA synthetase multienzyme complex
GO:0043039 P tRNA aminoacylation
GO:0048813 P dendrite morphogenesis
FPKM:18.40 TPM:17.03
4815 A_BomaMG_comp14704_c0_seq1
239bp
hypothetical_protein_[Brevibacillus_choshinensis]
FPKM:2.15 TPM:1.99
4816 A_BomaMG_comp14705_c0_seq1
532bp
PREDICTED:_uncharacterized_protein_LOC101744598_isoform_X3_[Bombyx_mori]
FPKM:1.45 TPM:1.34
4817 A_BomaMG_comp14705_c1_seq1
214bp
PREDICTED:_uncharacterized_protein_LOC101744598_isoform_X3_[Bombyx_mori]
FPKM:1.61 TPM:1.49
4818 A_BomaMG_comp147071_c0_seq1
284bp
FPKM:2.27 TPM:2.10
4819 A_BomaMG_comp14709_c0_seq1
204bp
FPKM:0.99 TPM:0.91
4820 A_BomaMG_comp14710_c0_seq1
468bp
hypothetical_protein_[Frankia_alni]
FPKM:1.66 TPM:1.53
4821 A_BomaMG_comp14710_c1_seq1
237bp
PREDICTED:_uncharacterized_protein_LOC105842300_[Bombyx_mori]
FPKM:1.66 TPM:1.54
4822 A_BomaMG_comp14711_c0_seq1
358bp
FPKM:0.77 TPM:0.71
4823 A_BomaMG_comp14712_c0_seq1
279bp
FPKM:1.36 TPM:1.26
4824 A_BomaMG_comp14714_c0_seq1
607bp
stage_II_sporulation_protein_E_protein_serine/threonine_phosphatase_[Clostridium_sp._CAG:440]
FPKM:1.27 TPM:1.18
4825 A_BomaMG_comp14715_c0_seq1
572bp
FPKM:1.21 TPM:1.12
4826 A_BomaMG_comp14715_c1_seq1
216bp
FPKM:3.11 TPM:2.88
4827 A_BomaMG_comp14717_c0_seq1
298bp
MULTISPECIES:_nucleoid_occlusion_factor_SlmA_[Comamonadaceae]
FPKM:0.86 TPM:0.80
4828 A_BomaMG_comp14718_c0_seq1
532bp
PREDICTED:_tectonin_beta-propeller_repeat-containing_protein_[Bombyx_mori]
GO:0000421 C autophagosome membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005765 C lysosomal membrane
GO:0007031 P peroxisome organization
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0097352 P autophagosome maturation
FPKM:0.68 TPM:0.63
4829 A_BomaMG_comp14718_c1_seq1
425bp
Tectonin_beta-propeller_repeat-containing_protein_[Papilio_xuthus]
GO:0000421 C autophagosome membrane
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005765 C lysosomal membrane
GO:0007031 P peroxisome organization
GO:0016021 C integral component of membrane
GO:0030246 F carbohydrate binding
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0097352 P autophagosome maturation
FPKM:1.11 TPM:1.03
4830 A_BomaMG_comp1471_c0_seq1
483bp
FPKM:0.79 TPM:0.73
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