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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4771 A_BomaMG_comp146609_c0_seq1
461bp
chorion_class_A_[Bombyx_mori]
FPKM:2.30 TPM:2.13
4772 A_BomaMG_comp14660_c0_seq1
298bp
FPKM:0.86 TPM:0.80
4773 A_BomaMG_comp14662_c0_seq1
321bp
PREDICTED:_LOW_QUALITY_PROTEIN:_cell_division_cycle_protein_16_homolog_[Bombyx_mori]
FPKM:1.93 TPM:1.79
4774 A_BomaMG_comp14663_c0_seq1
466bp
FPKM:5.60 TPM:5.19
4775 A_BomaMG_comp14664_c0_seq1
789bp
PREDICTED:_leucine-rich_repeat_protein_1_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0016567 P protein ubiquitination
FPKM:2.01 TPM:1.86
4776 A_BomaMG_comp14664_c1_seq1
399bp
PREDICTED:_leucine-rich_repeat_protein_1_[Plutella_xylostella]
GO:0005515 F protein binding
GO:0016567 P protein ubiquitination
FPKM:1.56 TPM:1.44
4777 A_BomaMG_comp14665_c0_seq1
299bp
hypothetical_protein_M422DRAFT_58946_[Sphaerobolus_stellatus_SS14]
FPKM:2.57 TPM:2.38
4778 A_BomaMG_comp146672_c0_seq1
470bp
FPKM:1.65 TPM:1.52
4779 A_BomaMG_comp14669_c0_seq1
812bp
FPKM:1.02 TPM:0.94
4780 A_BomaMG_comp14670_c0_seq1
434bp
FPKM:1.07 TPM:0.99
4781 A_BomaMG_comp146728_c0_seq1
770bp
FPKM:1.32 TPM:1.23
4782 A_BomaMG_comp14672_c0_seq1
426bp
PREDICTED:_SLIT-ROBO_Rho_GTPase-activating_protein_3-like_isoform_X1_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007165 P signal transduction
GO:0030336 P negative regulation of cell migration
GO:0043547 P positive regulation of GTPase activity
GO:0048365 F small GTPase binding
FPKM:1.25 TPM:1.16
4783 A_BomaMG_comp14673_c0_seq1
362bp
PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
FPKM:1.50 TPM:1.39
4784 A_BomaMG_comp14674_c0_seq1
254bp
reverse_transcriptase_[Bombyx_mori]
FPKM:2.22 TPM:2.05
4785 A_BomaMG_comp14675_c0_seq1
232bp
PREDICTED:_CTD_small_phosphatase-like_protein_2_[Bombyx_mori]
FPKM:1.19 TPM:1.10
4786 A_BomaMG_comp14676_c0_seq1
210bp
PREDICTED:_LOW_QUALITY_PROTEIN:_CD109_antigen-like,_partial_[Bombyx_mori]
FPKM:3.49 TPM:3.23
4787 A_BomaMG_comp14677_c0_seq1
529bp
FPKM:0.98 TPM:0.90
4788 A_BomaMG_comp14677_c1_seq1
313bp
FPKM:1.79 TPM:1.66
4789 A_BomaMG_comp14678_c0_seq1
335bp
FPKM:1.98 TPM:1.83
4790 A_BomaMG_comp14679_c0_seq1
233bp
transcriptional_regulator_[Pseudoalteromonas_lipolytica]
FPKM:0.59 TPM:0.54
4791 A_BomaMG_comp14680_c0_seq1
434bp
Uncharacterized_protein_OBRU01_22018_[Operophtera_brumata]
FPKM:1.61 TPM:1.49
4792 A_BomaMG_comp14682_c0_seq1
208bp
FPKM:2.72 TPM:2.52
4793 A_BomaMG_comp14682_c1_seq1
307bp
hypothetical_protein_[Streptomyces_catenulae]
FPKM:1.61 TPM:1.49
4794 A_BomaMG_comp146833_c0_seq1
439bp
Uncharacterized_protein_OBRU01_10042_[Operophtera_brumata]
FPKM:2.50 TPM:2.32
4795 A_BomaMG_comp14683_c0_seq1
349bp
PREDICTED:_protein_lethal(3)malignant_blood_neoplasm_1_[Bombyx_mori]
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008010 F structural constituent of chitin-based larval cuticle
GO:0022416 P chaeta development
GO:0031012 C extracellular matrix
GO:0035220 P wing disc development
GO:0040003 P chitin-based cuticle development
GO:0042302 F structural constituent of cuticle
GO:0042387 P plasmatocyte differentiation
GO:0048471 C perinuclear region of cytoplasm
FPKM:0.61 TPM:0.56
4796 A_BomaMG_comp14685_c0_seq1
284bp
hypothetical_protein_A1O5_11619_[Cladophialophora_psammophila_CBS_110553]
FPKM:2.27 TPM:2.10
4797 A_BomaMG_comp14687_c0_seq1
431bp
FPKM:1.09 TPM:1.01
4798 A_BomaMG_comp14688_c0_seq1
709bp
FPKM:1.21 TPM:1.12
4799 A_BomaMG_comp14688_c1_seq1
425bp
acetylcholine_receptor_subunit_gamma-like,_partial_[Scleropages_formosus]
FPKM:1.25 TPM:1.16
4800 A_BomaMG_comp14689_c0_seq1
407bp
FPKM:1.50 TPM:1.39
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