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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4351

A_BomaMG_comp142882_c0_seq1

287bp

FPKM:1.89 TPM:1.75

4352

A_BomaMG_comp14288_c0_seq1

655bp

MSL2_protein_[Bombyx_mori]

GO:0005654	C	nucleoplasm
GO:0008270	F	zinc ion binding
GO:0016567	P	protein ubiquitination
GO:0016874	F	ligase activity
GO:0043984	P	histone H4-K16 acetylation
GO:0046872	F	metal ion binding
GO:0061630	F	ubiquitin protein ligase activity
GO:0072487	C	MSL complex

FPKM:1.00 TPM:0.93

4353

A_BomaMG_comp14290_c0_seq1

256bp

FPKM:1.73 TPM:1.60

4354

A_BomaMG_comp14290_c1_seq1

290bp

FPKM:3.07 TPM:2.85

4355

A_BomaMG_comp14291_c0_seq1

294bp

outer_membrane_autotransporter_barrel_domain-containing_protein_[Escherichia_coli]

FPKM:1.78 TPM:1.65

4356

A_BomaMG_comp14292_c0_seq1

232bp

FPKM:3.57 TPM:3.31

4357

A_BomaMG_comp142932_c0_seq1

295bp

FPKM:3.24 TPM:3.00

4358

A_BomaMG_comp14293_c0_seq1

856bp

FPKM:1.61 TPM:1.49

4359

A_BomaMG_comp14294_c0_seq1

555bp

FPKM:2.45 TPM:2.27

4360

A_BomaMG_comp14294_c1_seq1

613bp

FPKM:1.65 TPM:1.53

4361

A_BomaMG_comp14296_c0_seq1

3610bp

PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]

GO:0004843	F	thiol-dependent deubiquitinase
GO:0005737	C	cytoplasm
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0007179	P	transforming growth factor beta receptor signaling pathway
GO:0007283	P	spermatogenesis
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0016477	P	cell migration
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0030509	P	BMP signaling pathway
GO:0036459	F	thiol-dependent deubiquitinase
GO:0070410	F	co-SMAD binding

FPKM:4.66 TPM:4.31

4362

A_BomaMG_comp142984_c0_seq1

857bp

PREDICTED:_pecanex-like_protein_1_[Bombyx_mori]

GO:0005783	C	endoplasmic reticulum
GO:0005886	C	plasma membrane
GO:0005887	C	integral component of plasma membrane
GO:0007029	P	endoplasmic reticulum organization
GO:0007219	P	Notch signaling pathway
GO:0007275	P	multicellular organism development
GO:0007399	P	nervous system development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030154	P	cell differentiation
GO:0046331	P	lateral inhibition

FPKM:2.41 TPM:2.23

4363

A_BomaMG_comp14298_c0_seq1

288bp

PREDICTED:_zinc_transporter_2-like_[Amyelois_transitella]

GO:0005886	C	plasma membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006812	P	cation transport
GO:0006829	P	zinc ion transport
GO:0008324	F	cation transmembrane transporter activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030658	C	transport vesicle membrane
GO:0031410	C	cytoplasmic vesicle
GO:0055085	P	transmembrane transport
GO:0098655	P	cation transmembrane transport

FPKM:2.82 TPM:2.61

4364

A_BomaMG_comp14299_c0_seq1

645bp

PREDICTED:_exportin-7_[Plutella_xylostella]

GO:0005049	F	nuclear export signal receptor activity
GO:0005634	C	nucleus
GO:0005643	C	nuclear pore
GO:0005737	C	cytoplasm
GO:0006611	P	protein export from nucleus
GO:0006810	P	transport
GO:0006886	P	intracellular protein transport
GO:0008536	F	small GTPase binding
GO:0015031	P	protein transport

FPKM:1.75 TPM:1.62

4365

A_BomaMG_comp142_c0_seq1

237bp

PREDICTED:_uncharacterized_protein_LOC101742377_[Bombyx_mori]

GO:0006718	P	juvenile hormone biosynthetic process
GO:0008168	F	methyltransferase activity
GO:0016740	F	transferase activity
GO:0019010	F	farnesoic acid O-methyltransferase activity
GO:0032259	P	methylation
GO:0035049	F	juvenile hormone acid methyltransferase activity

FPKM:1.11 TPM:1.02

4366

A_BomaMG_comp14303_c0_seq1

351bp

FPKM:1.80 TPM:1.66

4367

A_BomaMG_comp14305_c0_seq1

321bp

PREDICTED:_activin_receptor_type-2B-like_[Bombyx_mori]

FPKM:1.93 TPM:1.79

4368

A_BomaMG_comp14305_c1_seq1

205bp

PREDICTED:_activin_receptor_type-2B-like_[Bombyx_mori]

FPKM:0.00 TPM:0.00

4369

A_BomaMG_comp14306_c0_seq1

299bp

FPKM:1.14 TPM:1.06

4370

A_BomaMG_comp14307_c0_seq1

382bp

PREDICTED:_zinc_finger_SWIM_domain-containing_protein_5-like_[Amyelois_transitella]

GO:0008270	F	zinc ion binding
GO:0046872	F	metal ion binding
GO:0048812	P	neuron projection morphogenesis
GO:2001222	P	regulation of neuron migration

FPKM:2.54 TPM:2.35

4371

A_BomaMG_comp14308_c0_seq1

571bp

FPKM:1.04 TPM:0.97

4372

A_BomaMG_comp143092_c0_seq1

353bp

FPKM:1.38 TPM:1.28

4373

A_BomaMG_comp14309_c0_seq1

1801bp

PREDICTED:_cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]

GO:0000049	F	tRNA binding
GO:0000166	F	nucleotide binding
GO:0004812	F	aminoacyl-tRNA ligase activity
GO:0004817	F	cysteine-tRNA ligase activity
GO:0005524	F	ATP binding
GO:0005737	C	cytoplasm
GO:0006412	P	translation
GO:0006418	P	tRNA aminoacylation for protein translation
GO:0006423	P	cysteinyl-tRNA aminoacylation
GO:0016874	F	ligase activity
GO:0046872	F	metal ion binding

FPKM:8.04 TPM:7.45

4374

A_BomaMG_comp1430_c0_seq1

240bp

PREDICTED:_uncharacterized_protein_LOC106709922_[Papilio_machaon]

FPKM:1.59 TPM:1.47

4375

A_BomaMG_comp14310_c0_seq1

1201bp

PREDICTED:_28S_ribosomal_protein_S35,_mitochondrial_[Amyelois_transitella]

GO:0003735	F	structural constituent of ribosome
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0005763	C	mitochondrial small ribosomal subunit
GO:0005840	C	ribosome
GO:0030529	C	ribonucleoprotein complex
GO:0042769	P	obsolete DNA damage response, detection of DNA damage
GO:0044822	F	RNA binding
GO:0070125	P	mitochondrial translational elongation
GO:0070126	P	mitochondrial translational termination