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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4381 A_BomaMG_comp143172_c0_seq1
1268bp
FPKM:1.49 TPM:1.38
4382 A_BomaMG_comp14317_c0_seq1
547bp
PREDICTED:_tudor_and_KH_domain-containing_protein_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0007140 P male meiotic nuclear division
GO:0007283 P spermatogenesis
GO:0009566 P fertilization
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0034587 P piRNA metabolic process
GO:0043046 P DNA methylation involved in gamete generation
GO:0071546 C pi-body
GO:0071547 C piP-body
FPKM:1.30 TPM:1.20
4383 A_BomaMG_comp14318_c0_seq1
509bp
FPKM:1.24 TPM:1.15
4384 A_BomaMG_comp14319_c0_seq1
488bp
FPKM:1.99 TPM:1.84
4385 A_BomaMG_comp1431_c0_seq1
213bp
FPKM:0.82 TPM:0.76
4386 A_BomaMG_comp143205_c0_seq1
352bp
FPKM:1.19 TPM:1.10
4387 A_BomaMG_comp14320_c0_seq1
307bp
hypothetical_protein_[Lactobacillus_uvarum]
FPKM:2.94 TPM:2.73
4388 A_BomaMG_comp143217_c0_seq1
488bp
PREDICTED:_neurexin-4_isoform_X4_[Bombyx_mori]
GO:0003015 P heart process
GO:0004888 F transmembrane signaling receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005918 C septate junction
GO:0005919 C pleated septate junction
GO:0007155 P cell adhesion
GO:0007163 P establishment or maintenance of cell polarity
GO:0007165 P signal transduction
GO:0007391 P dorsal closure
GO:0008039 P synaptic target recognition
GO:0008065 P establishment of blood-nerve barrier
GO:0008104 P protein localization
GO:0008366 P axon ensheathment
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016080 P synaptic vesicle targeting
GO:0016081 P synaptic vesicle docking
GO:0019991 P septate junction assembly
GO:0021682 P nerve maturation
GO:0030054 C cell junction
GO:0035151 P regulation of tube size, open tracheal system
GO:0045216 P cell-cell junction organization
GO:0048786 C presynaptic active zone
GO:0060857 P establishment of glial blood-brain barrier
GO:0061343 P cell adhesion involved in heart morphogenesis
GO:0072553 P terminal button organization
GO:0097105 P presynaptic membrane assembly
FPKM:2.43 TPM:2.25
4389 A_BomaMG_comp14321_c0_seq1
823bp
c-myc_[Bombyx_mori]
FPKM:1.43 TPM:1.32
4390 A_BomaMG_comp14322_c0_seq1
236bp
PREDICTED:_large_neutral_amino_acids_transporter_small_subunit_1_[Papilio_xuthus]
GO:0003333 P amino acid transmembrane transport
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006461 P protein-containing complex assembly
GO:0006520 P cellular amino acid metabolic process
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0015171 F amino acid transmembrane transporter activity
GO:0015179 F L-amino acid transmembrane transporter activity
GO:0015297 F antiporter activity
GO:0015807 P L-amino acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0050900 P leukocyte migration
GO:1902475 P L-alpha-amino acid transmembrane transport
FPKM:3.93 TPM:3.64
4391 A_BomaMG_comp14323_c0_seq1
929bp
PREDICTED:_uncharacterized_protein_LOC106711187_[Papilio_machaon]
FPKM:1.95 TPM:1.80
4392 A_BomaMG_comp14323_c1_seq1
1046bp
PREDICTED:_uncharacterized_protein_LOC105841320_[Bombyx_mori]
FPKM:1.37 TPM:1.27
4393 A_BomaMG_comp14324_c0_seq1
486bp
PREDICTED:_peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_2-like_[Amyelois_transitella]
GO:0004598 F peptidylamidoglycolate lyase activity
GO:0005576 C extracellular region
GO:0016829 F lyase activity
GO:0044237 P cellular metabolic process
GO:0046872 F metal ion binding
FPKM:2.12 TPM:1.96
4394 A_BomaMG_comp14324_c1_seq1
911bp
PREDICTED:_peptidyl-alpha-hydroxyglycine_alpha-amidating_lyase_2-like_[Papilio_xuthus]
GO:0004598 F peptidylamidoglycolate lyase activity
GO:0005576 C extracellular region
GO:0016829 F lyase activity
GO:0044237 P cellular metabolic process
GO:0046872 F metal ion binding
FPKM:1.67 TPM:1.55
4395 A_BomaMG_comp14325_c0_seq1
324bp
hypothetical_protein_KGM_04477_[Danaus_plexippus]
FPKM:1.66 TPM:1.53
4396 A_BomaMG_comp14325_c1_seq1
471bp
hypothetical_protein_KGM_04477_[Danaus_plexippus]
FPKM:1.64 TPM:1.52
4397 A_BomaMG_comp14326_c0_seq1
288bp
PREDICTED:_vacuolar_protein_sorting-associated_protein_13D-like_[Plutella_xylostella]
FPKM:6.57 TPM:6.08
4398 A_BomaMG_comp14327_c0_seq1
301bp
PREDICTED:_midasin_isoform_X1_[Bombyx_mori]
FPKM:2.24 TPM:2.08
4399 A_BomaMG_comp14328_c0_seq1
480bp
PREDICTED:_protein_ARV1_isoform_X1_[Papilio_xuthus]
FPKM:1.70 TPM:1.58
4400 A_BomaMG_comp14328_c1_seq1
746bp
PREDICTED:_uncharacterized_protein_LOC101740229_isoform_X2_[Bombyx_mori]
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006629 P lipid metabolic process
GO:0006665 P sphingolipid metabolic process
GO:0006695 P cholesterol biosynthetic process
GO:0008206 P bile acid metabolic process
GO:0015248 F sterol transporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016125 P sterol metabolic process
GO:0030301 P cholesterol transport
GO:0032366 P intracellular sterol transport
GO:0032541 C cortical endoplasmic reticulum
GO:0090181 P regulation of cholesterol metabolic process
GO:0097036 P regulation of plasma membrane sterol distribution
FPKM:4.14 TPM:3.83
4401 A_BomaMG_comp143295_c0_seq1
522bp
FPKM:2.69 TPM:2.49
4402 A_BomaMG_comp14330_c0_seq1
723bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.94 TPM:1.80
4403 A_BomaMG_comp14330_c1_seq1
303bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.38 TPM:1.28
4404 A_BomaMG_comp14331_c0_seq1
310bp
PREDICTED:_solute_carrier_family_35_member_G1_[Bombyx_mori]
FPKM:2.09 TPM:1.94
4405 A_BomaMG_comp14331_c1_seq1
246bp
PREDICTED:_solute_carrier_family_35_member_G1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:1990034 P calcium ion export across plasma membrane
FPKM:1.96 TPM:1.81
4406 A_BomaMG_comp14332_c0_seq1
1162bp
FPKM:1.35 TPM:1.25
4407 A_BomaMG_comp14333_c0_seq1
520bp
hypothetical_protein_[Paenibacillus_sp._FJAT-22460]
FPKM:2.00 TPM:1.85
4408 A_BomaMG_comp14334_c0_seq1
530bp
PREDICTED:_tankyrase-2_[Papilio_xuthus]
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005515 F protein binding
GO:0006471 P protein ADP-ribosylation
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
GO:0090364 P regulation of proteasome assembly
GO:0097110 F scaffold protein binding
FPKM:2.21 TPM:2.04
4409 A_BomaMG_comp14334_c0_seq2
542bp
PREDICTED:_tankyrase-2_[Papilio_xuthus]
GO:0003950 F NAD+ ADP-ribosyltransferase activity
GO:0005515 F protein binding
GO:0006471 P protein ADP-ribosylation
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0022416 P chaeta development
GO:0035220 P wing disc development
GO:0046872 F metal ion binding
GO:0090364 P regulation of proteasome assembly
GO:0097110 F scaffold protein binding
FPKM:2.00 TPM:1.85
4410 A_BomaMG_comp14335_c0_seq1
1604bp
PREDICTED:_probable_polyamine_oxidase_5_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006598 P polyamine catabolic process
GO:0016491 F oxidoreductase activity
GO:0046208 P spermine catabolic process
GO:0046592 F polyamine oxidase activity
GO:0052894 F norspermine:oxygen oxidoreductase activity
GO:0052895 F N1-acetylspermine:oxygen oxidoreductase (N1-acetylspermidine-forming) activity
GO:0052901 F spermine:oxygen oxidoreductase (spermidine-forming) activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:3.45 TPM:3.19
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