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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4321

A_BomaMG_comp14266_c0_seq1

358bp

hypothetical_protein_[Ectothiorhodospira_haloalkaliphila]

FPKM:1.92 TPM:1.78

4322

A_BomaMG_comp14267_c0_seq1

288bp

DNA_replication_licensing_factor_mcm5_[Drechmeria_coniospora]

FPKM:3.13 TPM:2.90

4323

A_BomaMG_comp14268_c0_seq1

344bp

FPKM:1.87 TPM:1.73

4324

A_BomaMG_comp14269_c0_seq1

335bp

FPKM:1.76 TPM:1.63

4325

A_BomaMG_comp1426_c0_seq1

317bp

endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]

FPKM:1.24 TPM:1.15

4326

A_BomaMG_comp14270_c0_seq1

290bp

FPKM:1.23 TPM:1.14

4327

A_BomaMG_comp14270_c1_seq1

370bp

dimethyladenosine_transferase_[Thecamonas_trahens_ATCC_50062]

FPKM:1.62 TPM:1.50

4328

A_BomaMG_comp14271_c0_seq1

357bp

FPKM:1.54 TPM:1.42

4329

A_BomaMG_comp14271_c1_seq1

336bp

FPKM:1.97 TPM:1.82

4330

A_BomaMG_comp14272_c0_seq1

432bp

FPKM:1.49 TPM:1.38

4331

A_BomaMG_comp14272_c1_seq1

311bp

FPKM:1.82 TPM:1.68

4332

A_BomaMG_comp14273_c0_seq1

301bp

FPKM:1.68 TPM:1.56

4333

A_BomaMG_comp14274_c0_seq1

617bp

FPKM:1.56 TPM:1.44

4334

A_BomaMG_comp14275_c0_seq1

322bp

FPKM:2.64 TPM:2.44

4335

A_BomaMG_comp14275_c1_seq1

565bp

PREDICTED:_protein_groucho-like_isoform_X7_[Bombyx_mori]

GO:0000122	P	negative regulation of transcription by RNA polymerase II
GO:0001106	F	transcription corepressor activity
GO:0003677	F	DNA binding
GO:0003714	F	transcription corepressor activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007015	P	actin filament organization
GO:0007275	P	multicellular organism development
GO:0007399	P	nervous system development
GO:0007541	P	sex determination, primary response to X:A ratio
GO:0008134	F	transcription factor binding
GO:0016055	P	Wnt signaling pathway
GO:0030154	P	cell differentiation
GO:0030178	P	negative regulation of Wnt signaling pathway
GO:0043234	C	protein-containing complex
GO:0045879	P	negative regulation of smoothened signaling pathway
GO:0045892	P	negative regulation of transcription, DNA-templated
GO:0046331	P	lateral inhibition
GO:0048813	P	dendrite morphogenesis
GO:0070491	F	DNA-binding transcription factor binding
GO:0071837	F	HMG box domain binding
GO:0071906	F	CRD domain binding
GO:0090090	P	negative regulation of canonical Wnt signaling pathway

FPKM:1.86 TPM:1.72

4336

A_BomaMG_comp142775_c0_seq1

1241bp

PREDICTED:_uncharacterized_protein_LOC101739897_[Bombyx_mori]

FPKM:1.82 TPM:1.69

4337

A_BomaMG_comp142776_c0_seq1

900bp

FPKM:1.98 TPM:1.83

4338

A_BomaMG_comp142777_c0_seq1

272bp

PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_20_isoform_X1_[Bombyx_mori]

GO:0004197	F	cysteine-type endopeptidase activity
GO:0004843	F	thiol-dependent deubiquitinase
GO:0005737	C	cytoplasm
GO:0005813	C	centrosome
GO:0005815	C	microtubule organizing center
GO:0005856	C	cytoskeleton
GO:0006508	P	proteolysis
GO:0006511	P	ubiquitin-dependent protein catabolic process
GO:0006897	P	endocytosis
GO:0007411	P	axon guidance
GO:0008233	F	peptidase activity
GO:0008234	F	cysteine-type peptidase activity
GO:0008270	F	zinc ion binding
GO:0008277	P	regulation of G protein-coupled receptor signaling pathway
GO:0016477	P	cell migration
GO:0016579	P	protein deubiquitination
GO:0016787	F	hydrolase activity
GO:0036459	F	thiol-dependent deubiquitinase
GO:0046872	F	metal ion binding
GO:0048471	C	perinuclear region of cytoplasm
GO:0051298	P	centrosome duplication
GO:0070536	P	protein K63-linked deubiquitination
GO:0071108	P	protein K48-linked deubiquitination

FPKM:5.46 TPM:5.05

4339

A_BomaMG_comp142786_c0_seq1

661bp

PREDICTED:_adenomatous_polyposis_coli_protein-like_isoform_X2_[Bombyx_mori]

FPKM:2.97 TPM:2.75

4340

A_BomaMG_comp14279_c0_seq1

817bp

FPKM:1.28 TPM:1.18

4341

A_BomaMG_comp1427_c0_seq1

267bp

FPKM:1.53 TPM:1.42

4342

A_BomaMG_comp1427_c1_seq1

245bp

FPKM:1.98 TPM:1.84

4343

A_BomaMG_comp14280_c0_seq1

210bp

Type_I_inositol-3,4-bisphosphate_4-phosphatase,_partial_[Stegodyphus_mimosarum]

FPKM:2.62 TPM:2.42

4344

A_BomaMG_comp142810_c0_seq1

273bp

olfactory_receptor_[Bombyx_mori]

FPKM:1.44 TPM:1.33

4345

A_BomaMG_comp142826_c0_seq1

523bp

PREDICTED:_actin-binding_protein_IPP-like_isoform_X2_[Bombyx_mori]

GO:0003779	F	actin binding
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005737	C	cytoplasm
GO:0005856	C	cytoskeleton
GO:0015629	C	actin cytoskeleton
GO:0016567	P	protein ubiquitination
GO:0031463	C	Cul3-RING ubiquitin ligase complex