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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4291 A_BomaMG_comp14244_c0_seq1
1293bp
PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
FPKM:1.31 TPM:1.21
4292 A_BomaMG_comp14244_c1_seq1
247bp
PREDICTED:_histone-lysine_N-methyltransferase_SETD1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000791 C euchromatin
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0032259 P methylation
GO:0035327 C euchromatin
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0044648 P histone H3-K4 dimethylation
GO:0046427 P positive regulation of receptor signaling pathway via JAK-STAT
GO:0048188 C Set1C/COMPASS complex
GO:0051568 P histone H3-K4 methylation
GO:0080182 P histone H3-K4 trimethylation
FPKM:1.93 TPM:1.79
4293 A_BomaMG_comp14245_c0_seq1
335bp
FPKM:0.66 TPM:0.61
4294 A_BomaMG_comp14246_c0_seq1
289bp
Bifunctional_heparan_sulfate_N-deacetylase/N-sulfotransferase_[Papilio_xuthus]
GO:0000137 C Golgi cis cisterna
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005622 C intracellular anatomical structure
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006024 P glycosaminoglycan biosynthetic process
GO:0006790 P sulfur compound metabolic process
GO:0007166 P cell surface receptor signaling pathway
GO:0007283 P spermatogenesis
GO:0007367 P segment polarity determination
GO:0007427 P epithelial cell migration, open tracheal system
GO:0007428 P primary branching, open tracheal system
GO:0007474 P imaginal disc-derived wing vein specification
GO:0007507 P heart development
GO:0007509 P mesoderm migration involved in gastrulation
GO:0008146 F sulfotransferase activity
GO:0008152 P metabolic process
GO:0008543 P fibroblast growth factor receptor signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0015012 P heparan sulfate proteoglycan biosynthetic process
GO:0015014 P heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
GO:0015016 F [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016055 P Wnt signaling pathway
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0030210 P heparin biosynthetic process
GO:0045570 P regulation of imaginal disc growth
GO:0048312 P intracellular distribution of mitochondria
GO:0048488 P synaptic vesicle endocytosis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0090097 P regulation of BMP signaling pathway
FPKM:2.48 TPM:2.30
4295 A_BomaMG_comp142470_c0_seq1
511bp
hypothetical_protein_[Synechococcus_sp._WH_7803]
FPKM:2.26 TPM:2.10
4296 A_BomaMG_comp14247_c1_seq1
568bp
target_of_rapamycin_isoform_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0001030 F RNA polymerase III type 1 promoter sequence-specific DNA binding
GO:0001031 F RNA polymerase III type 2 promoter sequence-specific DNA binding
GO:0001032 F RNA polymerase III type 3 promoter sequence-specific DNA binding
GO:0001156 F TFIIIC-class transcription factor complex binding
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0001938 P positive regulation of endothelial cell proliferation
GO:0003007 P heart morphogenesis
GO:0003179 P heart valve morphogenesis
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005979 P regulation of glycogen biosynthetic process
GO:0006109 P regulation of carbohydrate metabolic process
GO:0006112 P energy reserve metabolic process
GO:0006207 P 'de novo' pyrimidine nucleobase biosynthetic process
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006950 P response to stress
GO:0007281 P germ cell development
GO:0007420 P brain development
GO:0007569 P cell aging
GO:0007616 P long-term memory
GO:0008144 F obsolete drug binding
GO:0008542 P visual learning
GO:0009791 P post-embryonic development
GO:0010507 P negative regulation of autophagy
GO:0010592 P positive regulation of lamellipodium assembly
GO:0010628 P positive regulation of gene expression
GO:0010831 P positive regulation of myotube differentiation
GO:0010942 P positive regulation of cell death
GO:0010976 P positive regulation of neuron projection development
GO:0012505 C endomembrane system
GO:0014042 P positive regulation of neuron maturation
GO:0014736 P negative regulation of muscle atrophy
GO:0016020 C membrane
GO:0016049 P cell growth
GO:0016242 P negative regulation of macroautophagy
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016605 C PML body
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0018105 P peptidyl-serine phosphorylation
GO:0018107 P peptidyl-threonine phosphorylation
GO:0019901 F protein kinase binding
GO:0019904 F protein domain specific binding
GO:0021510 P spinal cord development
GO:0030030 P cell projection organization
GO:0030425 C dendrite
GO:0030838 P positive regulation of actin filament polymerization
GO:0031397 P negative regulation of protein ubiquitination
GO:0031529 P ruffle organization
GO:0031641 P regulation of myelination
GO:0031669 P cellular response to nutrient levels
GO:0031929 P TOR signaling
GO:0031931 C TORC1 complex
GO:0031932 C TORC2 complex
GO:0031998 P regulation of fatty acid beta-oxidation
GO:0032095 P regulation of response to food
GO:0032868 P response to insulin
GO:0032956 P regulation of actin cytoskeleton organization
GO:0032991 C protein-containing complex
GO:0035176 P social behavior
GO:0035264 P multicellular organism growth
GO:0042060 P wound healing
GO:0042220 P response to cocaine
GO:0043022 F ribosome binding
GO:0043025 C neuronal cell body
GO:0043087 P regulation of GTPase activity
GO:0043200 P response to amino acid
GO:0043278 P response to morphine
GO:0043610 P regulation of carbohydrate utilization
GO:0045429 P positive regulation of nitric oxide biosynthetic process
GO:0045670 P regulation of osteoclast differentiation
GO:0045727 P positive regulation of translation
GO:0045792 P negative regulation of cell size
GO:0045859 P regulation of protein kinase activity
GO:0045945 P positive regulation of transcription by RNA polymerase III
GO:0046777 P protein autophosphorylation
GO:0046889 P positive regulation of lipid biosynthetic process
GO:0048255 P mRNA stabilization
GO:0048661 P positive regulation of smooth muscle cell proliferation
GO:0048714 P positive regulation of oligodendrocyte differentiation
GO:0048738 P cardiac muscle tissue development
GO:0050731 P positive regulation of peptidyl-tyrosine phosphorylation
GO:0050769 P positive regulation of neurogenesis
GO:0050882 P voluntary musculoskeletal movement
GO:0051219 F phosphoprotein binding
GO:0051496 P positive regulation of stress fiber assembly
GO:0051534 P negative regulation of calcineurin-NFAT signaling cascade
GO:0051896 P regulation of protein kinase B signaling
GO:0051897 P positive regulation of protein kinase B signaling
GO:0055006 P cardiac cell development
GO:0055013 P cardiac muscle cell development
GO:0060048 P cardiac muscle contraction
GO:0060135 P maternal process involved in female pregnancy
GO:0060252 P positive regulation of glial cell proliferation
GO:0060999 P positive regulation of dendritic spine development
GO:0061051 P positive regulation of cell growth involved in cardiac muscle cell development
GO:0071456 P cellular response to hypoxia
GO:0090335 P regulation of brown fat cell differentiation
GO:0090559 P regulation of membrane permeability
GO:1901216 P positive regulation of neuron death
GO:1901838 P positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
GO:1904000 P positive regulation of eating behavior
GO:1904056 P positive regulation of cholangiocyte proliferation
GO:1904058 P positive regulation of sensory perception of pain
GO:1904193 P negative regulation of cholangiocyte apoptotic process
GO:1904197 P positive regulation of granulosa cell proliferation
GO:1904206 P positive regulation of skeletal muscle hypertrophy
GO:1904213 P negative regulation of iodide transmembrane transport
FPKM:1.40 TPM:1.30
4297 A_BomaMG_comp142493_c0_seq1
321bp
PREDICTED:_rabenosyn-5_[Amyelois_transitella]
FPKM:3.14 TPM:2.91
4298 A_BomaMG_comp14249_c0_seq1
252bp
FPKM:3.63 TPM:3.36
4299 A_BomaMG_comp1424_c0_seq1
397bp
FPKM:0.79 TPM:0.73
4300 A_BomaMG_comp14250_c0_seq1
696bp
Uncharacterized_protein_OBRU01_25489_[Operophtera_brumata]
GO:0000166 F nucleotide binding
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0007018 P microtubule-based movement
GO:0007228 P positive regulation of hh target transcription factor activity
GO:0008017 F microtubule binding
GO:0008152 P metabolic process
FPKM:2.04 TPM:1.89
4301 A_BomaMG_comp14251_c0_seq1
559bp
PREDICTED:_uncharacterized_protein_LOC101743230_[Bombyx_mori]
FPKM:1.89 TPM:1.75
4302 A_BomaMG_comp14251_c1_seq1
495bp
PREDICTED:_uncharacterized_protein_LOC101743230_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000421 C autophagosome membrane
GO:0001932 P regulation of protein phosphorylation
GO:0001933 P negative regulation of protein phosphorylation
GO:0001934 P positive regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0005930 C axoneme
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0009267 P cellular response to starvation
GO:0010508 P positive regulation of autophagy
GO:0010608 P posttranscriptional regulation of gene expression
GO:0016020 C membrane
GO:0016236 P macroautophagy
GO:0031410 C cytoplasmic vesicle
GO:0034045 C phagophore assembly site membrane
GO:0035032 C phosphatidylinositol 3-kinase complex, class III
GO:0042149 P cellular response to glucose starvation
GO:0043552 P positive regulation of phosphatidylinositol 3-kinase activity
GO:0044233 C mitochondria-associated endoplasmic reticulum membrane
GO:0045335 C phagocytic vesicle
GO:0061635 P regulation of protein complex stability
GO:0090207 P regulation of triglyceride metabolic process
GO:0097629 C extrinsic component of omegasome membrane
GO:0097632 C extrinsic component of phagophore assembly site membrane
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
FPKM:1.84 TPM:1.70
4303 A_BomaMG_comp142523_c0_seq1
1048bp
PREDICTED:_lysosomal_thioesterase_PPT2_homolog_[Bombyx_mori]
GO:0005764 C lysosome
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0016790 F thiolester hydrolase activity
GO:0098599 F palmitoyl hydrolase activity
GO:0098734 P macromolecule depalmitoylation
FPKM:1.87 TPM:1.74
4304 A_BomaMG_comp14252_c0_seq1
289bp
peptidoglycan-binding_LysM_[Clostridium_sp._CAG:533]
FPKM:2.17 TPM:2.01
4305 A_BomaMG_comp14254_c0_seq1
448bp
FPKM:1.53 TPM:1.41
4306 A_BomaMG_comp14255_c0_seq1
218bp
unnamed_protein_product_[Vitrella_brassicaformis_CCMP3155]
FPKM:4.50 TPM:4.16
4307 A_BomaMG_comp142567_c0_seq1
712bp
reverse_transcriptase_[Bombyx_mori]
FPKM:2.23 TPM:2.07
4308 A_BomaMG_comp14256_c0_seq1
245bp
FPKM:0.99 TPM:0.92
4309 A_BomaMG_comp14257_c0_seq1
447bp
FPKM:2.68 TPM:2.48
4310 A_BomaMG_comp142599_c0_seq1
485bp
PREDICTED:_telomerase-binding_protein_EST1A_[Bombyx_mori]
FPKM:2.46 TPM:2.28
4311 A_BomaMG_comp14259_c0_seq1
271bp
FPKM:1.84 TPM:1.70
4312 A_BomaMG_comp14259_c1_seq1
217bp
hypothetical_protein_[Synechococcus_sp._CB0101]
FPKM:1.53 TPM:1.41
4313 A_BomaMG_comp142600_c0_seq1
1125bp
PREDICTED:_DNA-directed_RNA_polymerase_I_subunit_RPA49_[Papilio_machaon]
FPKM:1.97 TPM:1.83
4314 A_BomaMG_comp14260_c0_seq1
301bp
endonuclease,_partial_[Enterobacter_cloacae]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.68 TPM:1.56
4315 A_BomaMG_comp14261_c0_seq1
252bp
transient_receptor_potential_cation_channel_subfamily_A_member_1_[Bombyx_mori]
GO:0001580 P detection of chemical stimulus involved in sensory perception of bitter taste
GO:0005216 F ion channel activity
GO:0005261 F cation channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006816 P calcium ion transport
GO:0007602 P phototransduction
GO:0007638 P mechanosensory behavior
GO:0009408 P response to heat
GO:0009416 P response to light stimulus
GO:0010378 P temperature compensation of the circadian clock
GO:0015276 F ligand-gated ion channel activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019233 P sensory perception of pain
GO:0023041 P neuronal signal transduction
GO:0033038 F bitter taste receptor activity
GO:0034220 P ion transmembrane transport
GO:0034605 P cellular response to heat
GO:0034703 C cation channel complex
GO:0040040 P thermosensory behavior
GO:0043052 P thermotaxis
GO:0046957 P negative phototaxis
GO:0050850 P positive regulation of calcium-mediated signaling
GO:0050896 P response to stimulus
GO:0050960 P detection of temperature stimulus involved in thermoception
GO:0050965 P detection of temperature stimulus involved in sensory perception of pain
GO:0050968 P detection of chemical stimulus involved in sensory perception of pain
GO:0055085 P transmembrane transport
GO:0097604 F temperature-gated cation channel activity
GO:0098655 P cation transmembrane transport
FPKM:3.63 TPM:3.36
4316 A_BomaMG_comp14262_c0_seq1
336bp
PREDICTED:_uncharacterized_protein_LOC106138591_[Amyelois_transitella]
FPKM:2.19 TPM:2.02
4317 A_BomaMG_comp14263_c0_seq1
688bp
PREDICTED:_dual_serine/threonine_and_tyrosine_protein_kinase-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
FPKM:1.94 TPM:1.80
4318 A_BomaMG_comp14264_c0_seq1
1219bp
PREDICTED:_uncharacterized_protein_LOC101737333_isoform_X2_[Bombyx_mori]
FPKM:0.84 TPM:0.78
4319 A_BomaMG_comp14264_c0_seq2
1201bp
PREDICTED:_hemicentin-1_isoform_X5_[Papilio_xuthus]
FPKM:0.54 TPM:0.50
4320 A_BomaMG_comp14265_c0_seq1
496bp
Condensin-2_complex_subunit_D3_[Papilio_machaon]
FPKM:2.26 TPM:2.10
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