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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4261 A_BomaMG_comp1421_c1_seq1
286bp
PREDICTED:_uncharacterized_protein_LOC105381242_[Plutella_xylostella]
FPKM:0.96 TPM:0.88
4262 A_BomaMG_comp14220_c0_seq1
1301bp
PREDICTED:_major_facilitator_superfamily_domain-containing_protein_8_isoform_X1_[Bombyx_mori]
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
FPKM:3.87 TPM:3.58
4263 A_BomaMG_comp14222_c0_seq1
291bp
PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0016055 P Wnt signaling pathway
GO:0016491 F oxidoreductase activity
GO:0030154 P cell differentiation
GO:0030178 P negative regulation of Wnt signaling pathway
GO:0031397 P negative regulation of protein ubiquitination
GO:0047134 F protein-disulfide reductase (NAD(P)) activity
GO:0055114 P obsolete oxidation-reduction process
GO:0072358 P circulatory system development
FPKM:1.52 TPM:1.41
4264 A_BomaMG_comp14222_c1_seq1
679bp
PREDICTED:_nucleoredoxin-like_[Bombyx_mori]
FPKM:1.29 TPM:1.20
4265 A_BomaMG_comp142233_c0_seq1
445bp
FPKM:2.44 TPM:2.26
4266 A_BomaMG_comp14223_c0_seq1
359bp
PREDICTED:_uncharacterized_protein_LOC101738544_isoform_X3_[Bombyx_mori]
FPKM:2.10 TPM:1.94
4267 A_BomaMG_comp14223_c1_seq1
647bp
PREDICTED:_zinc_finger_protein_821-like_isoform_X1_[Bombyx_mori]
FPKM:1.60 TPM:1.48
4268 A_BomaMG_comp14226_c0_seq1
336bp
FPKM:0.44 TPM:0.40
4269 A_BomaMG_comp14226_c1_seq1
274bp
FPKM:2.14 TPM:1.98
4270 A_BomaMG_comp14227_c0_seq1
302bp
PREDICTED:_LOW_QUALITY_PROTEIN:_A-kinase_anchor_protein_13_[Bombyx_mori]
FPKM:2.50 TPM:2.32
4271 A_BomaMG_comp14228_c0_seq1
499bp
FPKM:1.28 TPM:1.19
4272 A_BomaMG_comp14228_c1_seq1
308bp
FPKM:2.39 TPM:2.21
4273 A_BomaMG_comp14229_c0_seq1
325bp
FPKM:1.65 TPM:1.52
4274 A_BomaMG_comp14229_c1_seq1
331bp
PREDICTED:_ras-related_protein_Ral-a_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007298 P border follicle cell migration
GO:0007391 P dorsal closure
GO:0007464 P R3/R4 cell fate commitment
GO:0008152 P metabolic process
GO:0008593 P regulation of Notch signaling pathway
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0022604 P regulation of cell morphogenesis
GO:0030165 F PDZ domain binding
GO:0045087 P innate immune response
GO:0045824 P negative regulation of innate immune response
GO:0046329 P negative regulation of JNK cascade
GO:0050829 P defense response to Gram-negative bacterium
FPKM:1.81 TPM:1.67
4275 A_BomaMG_comp1422_c0_seq1
455bp
PREDICTED:_zinc_finger_protein_425-like_isoform_X4_[Bombyx_mori]
GO:0001223 F transcription coactivator binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008134 F transcription factor binding
GO:0008285 P negative regulation of cell population proliferation
GO:0043565 F sequence-specific DNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
FPKM:1.61 TPM:1.49
4276 A_BomaMG_comp142306_c0_seq1
360bp
FPKM:2.09 TPM:1.93
4277 A_BomaMG_comp14230_c0_seq1
280bp
FPKM:2.36 TPM:2.18
4278 A_BomaMG_comp142312_c0_seq1
227bp
serine_threonine_kinase_sad-1_[Ascaris_suum]
FPKM:0.64 TPM:0.60
4279 A_BomaMG_comp14231_c0_seq1
692bp
FPKM:1.26 TPM:1.17
4280 A_BomaMG_comp14232_c0_seq1
253bp
hypothetical_protein_[Pseudomonas_sp._NBRC_111133]
FPKM:1.79 TPM:1.66
4281 A_BomaMG_comp14232_c1_seq1
344bp
dipicolinate_synthase_subunit_B_domain_protein,_partial_[Roseburia_inulinivorans_DSM_16841]
FPKM:1.66 TPM:1.54
4282 A_BomaMG_comp14233_c0_seq1
546bp
PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
FPKM:1.30 TPM:1.21
4283 A_BomaMG_comp14234_c0_seq1
457bp
predicted_protein_[Phaeodactylum_tricornutum_CCAP_1055/1]
FPKM:1.35 TPM:1.25
4284 A_BomaMG_comp14235_c0_seq1
253bp
hypothetical_protein_[Jonesia_denitrificans]
FPKM:3.14 TPM:2.91
4285 A_BomaMG_comp14236_c0_seq1
319bp
FPKM:1.23 TPM:1.13
4286 A_BomaMG_comp14237_c0_seq1
204bp
FPKM:0.00 TPM:0.00
4287 A_BomaMG_comp14239_c0_seq1
451bp
PREDICTED:_probable_GPI-anchored_adhesin-like_protein_PGA55_[Diaphorina_citri]
FPKM:1.64 TPM:1.51
4288 A_BomaMG_comp14241_c0_seq1
647bp
FPKM:1.38 TPM:1.28
4289 A_BomaMG_comp14242_c0_seq1
966bp
PREDICTED:_scm-like_with_four_MBT_domains_protein_1_[Papilio_machaon]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0010629 P negative regulation of gene expression
GO:0016235 C aggresome
GO:0042393 F histone binding
GO:0043231 C intracellular membrane-bounded organelle
FPKM:1.64 TPM:1.52
4290 A_BomaMG_comp142446_c0_seq1
344bp
PREDICTED:_ribosomal_RNA_processing_protein_1_homolog_[Papilio_polytes]
FPKM:2.91 TPM:2.70
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