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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4081 A_BomaMG_comp14096_c0_seq1
443bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Papilio_machaon]
FPKM:1.82 TPM:1.68
4082 A_BomaMG_comp14097_c0_seq1
219bp
PREDICTED:_unconventional_myosin-XVIIIa,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
FPKM:1.47 TPM:1.36
4083 A_BomaMG_comp140995_c0_seq1
991bp
PREDICTED:_dedicator_of_cytokinesis_protein_7_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005925 C focal adhesion
GO:0007264 P small GTPase mediated signal transduction
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0008180 C COP9 signalosome
GO:0014911 P positive regulation of smooth muscle cell migration
GO:0022027 P interkinetic nuclear migration
GO:0030154 P cell differentiation
GO:0030424 C axon
GO:0031175 P neuron projection development
GO:0033138 P positive regulation of peptidyl-serine phosphorylation
GO:0042995 C cell projection
GO:0043473 P pigmentation
GO:0045200 P establishment of neuroblast polarity
GO:0048365 F small GTPase binding
GO:0050767 P regulation of neurogenesis
GO:0090630 P activation of GTPase activity
FPKM:2.30 TPM:2.13
4084 A_BomaMG_comp14100_c0_seq1
204bp
FPKM:5.93 TPM:5.49
4085 A_BomaMG_comp14102_c0_seq1
641bp
FPKM:1.40 TPM:1.30
4086 A_BomaMG_comp14103_c0_seq1
203bp
phosphate_transport_protein_[Bombyx_mori]
FPKM:4.04 TPM:3.74
4087 A_BomaMG_comp14104_c0_seq1
622bp
PREDICTED:_integrator_complex_subunit_5_[Bombyx_mori]
FPKM:2.38 TPM:2.21
4088 A_BomaMG_comp14105_c0_seq1
1079bp
FPKM:1.73 TPM:1.61
4089 A_BomaMG_comp141068_c0_seq1
997bp
hypothetical_protein_KGM_01538_[Danaus_plexippus]
GO:0000027 P ribosomal large subunit assembly
GO:0000460 P maturation of 5.8S rRNA
GO:0000470 P maturation of LSU-rRNA
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0019843 F rRNA binding
GO:0030687 C preribosome, large subunit precursor
GO:0042134 F rRNA primary transcript binding
GO:0042254 P ribosome biogenesis
FPKM:1.74 TPM:1.61
4090 A_BomaMG_comp14107_c0_seq1
429bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.78 TPM:1.65
4091 A_BomaMG_comp14107_c1_seq1
424bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
FPKM:2.24 TPM:2.07
4092 A_BomaMG_comp14109_c0_seq1
1013bp
PREDICTED:_zinc_transporter_2-like_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0061090 P positive regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
FPKM:1.99 TPM:1.85
4093 A_BomaMG_comp14109_c0_seq2
831bp
PREDICTED:_zinc_transporter_2-like_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0061090 P positive regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
FPKM:22.73 TPM:21.05
4094 A_BomaMG_comp14110_c0_seq1
660bp
PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]
FPKM:1.91 TPM:1.77
4095 A_BomaMG_comp141111_c0_seq1
471bp
FPKM:1.76 TPM:1.63
4096 A_BomaMG_comp14111_c0_seq1
209bp
hypothetical_protein_PFUGPA_01410_[Plasmodium_falciparum_Palo_Alto/Uganda]
FPKM:10.68 TPM:9.89
4097 A_BomaMG_comp141129_c0_seq1
359bp
FPKM:1.72 TPM:1.59
4098 A_BomaMG_comp14112_c0_seq1
236bp
thioredoxin_[Streptococcus_ratti]
FPKM:2.81 TPM:2.60
4099 A_BomaMG_comp141130_c0_seq1
918bp
odorant_binding_protein_LOC100301495_precursor_[Bombyx_mori]
FPKM:2.34 TPM:2.17
4100 A_BomaMG_comp14114_c0_seq1
315bp
unknown_[Saccharomyces_cerevisiae]
FPKM:0.76 TPM:0.70
4101 A_BomaMG_comp14114_c1_seq1
324bp
FPKM:0.47 TPM:0.44
4102 A_BomaMG_comp141156_c0_seq1
1358bp
PREDICTED:_histone-lysine_N-methyltransferase,_H3_lysine-79_specific_[Amyelois_transitella]
GO:0000781 C chromosome, telomeric region
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006348 P subtelomeric heterochromatin assembly
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030702 P pericentric heterochromatin assembly
GO:0031151 F histone methyltransferase activity (H3-K79 specific)
GO:0032259 P methylation
GO:0034729 P histone H3-K79 methylation
GO:0035097 C histone methyltransferase complex
GO:0046331 P lateral inhibition
GO:0048096 P epigenetic maintenance of chromatin in transcription-competent conformation
GO:0051726 P regulation of cell cycle
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:1.96 TPM:1.81
4103 A_BomaMG_comp141159_c0_seq1
780bp
FPKM:1.81 TPM:1.68
4104 A_BomaMG_comp14115_c0_seq1
804bp
PREDICTED:_protein_JTB-like_[Plutella_xylostella]
GO:0000910 P cytokinesis
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019901 F protein kinase binding
GO:0030496 C midbody
GO:0045860 P positive regulation of protein kinase activity
GO:0051301 P cell division
FPKM:27.52 TPM:25.49
4105 A_BomaMG_comp141178_c0_seq1
1744bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106709759_[Papilio_machaon]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.86 TPM:1.72
4106 A_BomaMG_comp14117_c0_seq1
304bp
hypothetical_protein_[Geodermatophilaceae_bacterium_URHB0048]
FPKM:1.10 TPM:1.01
4107 A_BomaMG_comp141180_c0_seq1
3301bp
PREDICTED:_uncharacterized_protein_LOC106136812_[Amyelois_transitella]
FPKM:1.56 TPM:1.45
4108 A_BomaMG_comp14118_c0_seq1
372bp
hypothetical_protein,_partial_[Nocardiopsis_lucentensis]
FPKM:2.31 TPM:2.14
4109 A_BomaMG_comp14119_c0_seq1
219bp
hypothetical_protein_ANCDUO_23579_[Ancylostoma_duodenale]
FPKM:0.00 TPM:0.00
4110 A_BomaMG_comp141203_c0_seq1
292bp
PREDICTED:_ral_GTPase-activating_protein_subunit_beta-like_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0090630 P activation of GTPase activity
FPKM:1.81 TPM:1.68
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