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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
4111 A_BomaMG_comp14120_c0_seq1
1249bp
PREDICTED:_LOW_QUALITY_PROTEIN:_papilin_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030198 P extracellular matrix organization
GO:0030414 F peptidase inhibitor activity
GO:0031012 C extracellular matrix
FPKM:3.49 TPM:3.23
4112 A_BomaMG_comp14121_c0_seq1
1351bp
PREDICTED:_fatty_acyl-CoA_reductase_1-like_[Papilio_polytes]
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0006629 P lipid metabolic process
GO:0008611 P ether lipid biosynthetic process
GO:0010025 P wax biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0016620 F oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336 P long-chain fatty-acyl-CoA metabolic process
GO:0050062 F long-chain-fatty-acyl-CoA reductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0080019 F fatty-acyl-CoA reductase (alcohol-forming) activity
FPKM:1.33 TPM:1.23
4113 A_BomaMG_comp141228_c0_seq1
558bp
FPKM:2.34 TPM:2.17
4114 A_BomaMG_comp14122_c0_seq1
553bp
FPKM:0.20 TPM:0.19
4115 A_BomaMG_comp14122_c0_seq2
485bp
FPKM:3.10 TPM:2.87
4116 A_BomaMG_comp14123_c0_seq1
265bp
hypothetical_protein_[Streptomyces_collinus]
FPKM:2.74 TPM:2.54
4117 A_BomaMG_comp14126_c0_seq1
291bp
FPKM:0.61 TPM:0.56
4118 A_BomaMG_comp14126_c1_seq1
770bp
hypothetical_protein_[Bacillus_thuringiensis]
FPKM:2.59 TPM:2.40
4119 A_BomaMG_comp14127_c0_seq1
286bp
FPKM:3.82 TPM:3.54
4120 A_BomaMG_comp14128_c0_seq1
378bp
PREDICTED:_nesprin-1-like_isoform_X1_[Bombyx_mori]
FPKM:1.90 TPM:1.76
4121 A_BomaMG_comp141292_c0_seq1
230bp
FPKM:1.23 TPM:1.14
4122 A_BomaMG_comp14129_c0_seq1
204bp
FPKM:0.00 TPM:0.00
4123 A_BomaMG_comp141307_c0_seq1
485bp
FPKM:2.57 TPM:2.38
4124 A_BomaMG_comp141313_c0_seq1
1282bp
PREDICTED:_histone-lysine_N-methyltransferase_pr-set7_[Amyelois_transitella]
GO:0000077 P DNA damage checkpoint signaling
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008168 F methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0030261 P chromosome condensation
GO:0032259 P methylation
GO:0034771 P histone H4-K20 monomethylation
GO:0035067 P negative regulation of histone acetylation
GO:0042799 F histone methyltransferase activity (H4-K20 specific)
GO:0051301 P cell division
FPKM:1.75 TPM:1.62
4125 A_BomaMG_comp14131_c0_seq1
3138bp
MOG_interacting_and_ectopic_P-granules_protein_1_[Operophtera_brumata]
GO:0002119 P nematode larval development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0007275 P multicellular organism development
GO:0007506 P gonadal mesoderm development
GO:0007548 P sex differentiation
GO:0008134 F transcription factor binding
GO:0008406 P gonad development
GO:0010468 P regulation of gene expression
GO:0017151 F DEAD/H-box RNA helicase binding
GO:0030154 P cell differentiation
GO:0040025 P vulval development
GO:0040035 P hermaphrodite genitalia development
GO:0042802 F identical protein binding
GO:0042826 F histone deacetylase binding
GO:0046872 F metal ion binding
GO:0048599 P oocyte development
FPKM:3.34 TPM:3.09
4126 A_BomaMG_comp14131_c1_seq1
390bp
FPKM:2.11 TPM:1.96
4127 A_BomaMG_comp141322_c0_seq1
1297bp
PREDICTED:_dystrobrevin_beta-like_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0008270 F zinc ion binding
GO:0016014 C dystrobrevin complex
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0042383 C sarcolemma
GO:0043234 C protein-containing complex
GO:0045202 C synapse
GO:0046872 F metal ion binding
FPKM:1.58 TPM:1.46
4128 A_BomaMG_comp141329_c0_seq1
1685bp
PREDICTED:_uncharacterized_protein_LOC101745407_isoform_X4_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
FPKM:1.89 TPM:1.75
4129 A_BomaMG_comp14132_c0_seq1
564bp
39S_ribosomal_protein_L55,_mitochondrial_[Papilio_xuthus]
GO:0003700 F DNA-binding transcription factor activity
GO:0003735 F structural constituent of ribosome
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006412 P translation
GO:0007275 P multicellular organism development
GO:0030529 C ribonucleoprotein complex
FPKM:15.42 TPM:14.28
4130 A_BomaMG_comp14133_c0_seq1
366bp
PREDICTED:_1-aminocyclopropane-1-carboxylate_oxidase_5_[Ricinus_communis]
FPKM:4.04 TPM:3.74
4131 A_BomaMG_comp14133_c1_seq1
352bp
FPKM:0.79 TPM:0.74
4132 A_BomaMG_comp141346_c0_seq1
846bp
PREDICTED:_ankyrin_repeat_domain-containing_protein_12_[Bombyx_mori]
FPKM:2.70 TPM:2.50
4133 A_BomaMG_comp14134_c0_seq1
1849bp
FPKM:20.97 TPM:19.42
4134 A_BomaMG_comp141354_c0_seq1
380bp
PREDICTED:_histone-lysine_N-methyltransferase_EHMT2-like_[Papilio_polytes]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006275 P regulation of DNA replication
GO:0006306 P DNA methylation
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0009267 P cellular response to starvation
GO:0016279 F protein-lysine N-methyltransferase activity
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0018027 P peptidyl-lysine dimethylation
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0046872 F metal ion binding
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
GO:0070742 F C2H2 zinc finger domain binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:1990841 F promoter-specific chromatin binding
FPKM:2.90 TPM:2.69
4135 A_BomaMG_comp14135_c0_seq1
205bp
MULTISPECIES:_tricarboxylate_transporter_[unclassified_Betaproteobacteria_(miscellaneous)]
FPKM:3.87 TPM:3.58
4136 A_BomaMG_comp141381_c0_seq1
295bp
PREDICTED:_LOW_QUALITY_PROTEIN:_tuberin_[Bombyx_mori]
FPKM:4.71 TPM:4.36
4137 A_BomaMG_comp141388_c0_seq1
761bp
putative_checkpoint_suppressor_1_[Danaus_plexippus]
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0008022 F protein C-terminus binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0097094 P craniofacial suture morphogenesis
FPKM:2.22 TPM:2.06
4138 A_BomaMG_comp14139_c0_seq1
526bp
PREDICTED:_decaprenyl-diphosphate_synthase_subunit_2_[Amyelois_transitella]
GO:0000010 F trans-hexaprenyltranstransferase activity
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006744 P ubiquinone biosynthetic process
GO:0008299 P isoprenoid biosynthetic process
GO:0016740 F transferase activity
GO:0046982 F protein heterodimerization activity
GO:0050347 F trans-octaprenyltranstransferase activity
GO:0050878 P regulation of body fluid levels
GO:0051290 P protein heterotetramerization
GO:1990234 C transferase complex
FPKM:2.07 TPM:1.91
4139 A_BomaMG_comp14139_c1_seq1
251bp
putative_tumor_suppressor_protein,_partial_[Operophtera_brumata]
FPKM:1.84 TPM:1.70
4140 A_BomaMG_comp1413_c0_seq1
234bp
PREDICTED:_zinc_finger_protein_771-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:2.31 TPM:2.14
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