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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

4051

A_BomaMG_comp140742_c0_seq1

447bp

PREDICTED:_uncharacterized_protein_LOC102835311_[Chrysochloris_asiatica]

FPKM:2.30 TPM:2.13

4052

A_BomaMG_comp140743_c0_seq1

497bp

FPKM:1.93 TPM:1.79

4053

A_BomaMG_comp14074_c0_seq1

555bp

FPKM:1.91 TPM:1.76

4054

A_BomaMG_comp14075_c0_seq1

1693bp

PREDICTED:_pre-mRNA-processing_factor_19_[Bombyx_mori]

GO:0000209	P	protein polyubiquitination
GO:0000244	P	spliceosomal tri-snRNP complex assembly
GO:0000245	P	spliceosomal complex assembly
GO:0000398	P	mRNA splicing, via spliceosome
GO:0000974	C	Prp19 complex
GO:0001833	P	inner cell mass cell proliferation
GO:0004842	F	ubiquitin-protein transferase activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005662	C	DNA replication factor A complex
GO:0005681	C	spliceosomal complex
GO:0005737	C	cytoplasm
GO:0005811	C	lipid droplet
GO:0005819	C	spindle
GO:0005856	C	cytoskeleton
GO:0006281	P	DNA repair
GO:0006283	P	transcription-coupled nucleotide-excision repair
GO:0006303	P	double-strand break repair via nonhomologous end joining
GO:0006397	P	mRNA processing
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008380	P	RNA splicing
GO:0008610	P	lipid biosynthetic process
GO:0010498	P	proteasomal protein catabolic process
GO:0016020	C	membrane
GO:0016567	P	protein ubiquitination
GO:0016607	C	nuclear speck
GO:0016874	F	ligase activity
GO:0034450	F	ubiquitin-ubiquitin ligase activity
GO:0034613	P	cellular protein localization
GO:0035861	C	site of double-strand break
GO:0042802	F	identical protein binding
GO:0045665	P	negative regulation of neuron differentiation
GO:0048026	P	positive regulation of mRNA splicing, via spliceosome
GO:0048711	P	positive regulation of astrocyte differentiation
GO:0061630	F	ubiquitin protein ligase activity
GO:0070534	P	protein K63-linked ubiquitination
GO:0071013	C	catalytic step 2 spliceosome
GO:0072422	P	DNA damage checkpoint signaling

FPKM:8.98 TPM:8.31

4055

A_BomaMG_comp14076_c0_seq1

975bp

FPKM:1.62 TPM:1.50

4056

A_BomaMG_comp14077_c0_seq1

1127bp

zinc-dependent_alcohol_dehydrogenase_[Mycobacterium_europaeum]

FPKM:2.04 TPM:1.89

4057

A_BomaMG_comp14077_c1_seq1

356bp

FPKM:0.97 TPM:0.90

4058

A_BomaMG_comp140787_c0_seq1

2058bp

PREDICTED:_nucleolar_protein_10_[Bombyx_mori]

GO:0005634	C	nucleus
GO:0005730	C	nucleolus

FPKM:1.87 TPM:1.74

4059

A_BomaMG_comp14078_c0_seq1

566bp

FPKM:2.12 TPM:1.96

4060

A_BomaMG_comp14079_c0_seq1

1162bp

PREDICTED:_structural_maintenance_of_chromosomes_protein_1A_[Papilio_xuthus]

GO:0000166	F	nucleotide binding
GO:0000776	C	kinetochore
GO:0003682	F	chromatin binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0006281	P	DNA repair
GO:0006974	P	cellular response to DNA damage stimulus
GO:0007049	P	cell cycle
GO:0007064	P	mitotic sister chromatid cohesion
GO:0007067	P	mitotic cell cycle
GO:0007093	P	mitotic cell cycle checkpoint signaling
GO:0007126	P	meiotic cell cycle
GO:0008280	C	cohesin complex
GO:0009314	P	response to radiation
GO:0030893	C	meiotic cohesin complex
GO:0042770	P	signal transduction in response to DNA damage
GO:0051276	P	chromosome organization
GO:0051301	P	cell division
GO:0051321	P	meiotic cell cycle

FPKM:4.62 TPM:4.28

4061

A_BomaMG_comp1407_c0_seq1

208bp

Zinc_finger_protein_484,_partial_[Stegodyphus_mimosarum]

FPKM:2.72 TPM:2.52

4062

A_BomaMG_comp14080_c0_seq1

671bp

FPKM:1.11 TPM:1.03

4063

A_BomaMG_comp14081_c0_seq1

488bp

peptidoglycan_recognition_protein_S6_precursor_[Bombyx_mori]

GO:0000270	P	peptidoglycan metabolic process
GO:0002376	P	immune system process
GO:0004040	F	amidase activity
GO:0005515	F	protein binding
GO:0005576	C	extracellular region
GO:0005887	C	integral component of plasma membrane
GO:0006952	P	defense response
GO:0006955	P	immune response
GO:0008270	F	zinc ion binding
GO:0008745	F	N-acetylmuramoyl-L-alanine amidase activity
GO:0009253	P	peptidoglycan catabolic process
GO:0016045	P	detection of bacterium
GO:0016787	F	hydrolase activity
GO:0042834	F	peptidoglycan binding
GO:0045087	P	innate immune response
GO:0046872	F	metal ion binding
GO:0050830	P	defense response to Gram-positive bacterium
GO:0061060	P	negative regulation of peptidoglycan recognition protein signaling pathway

FPKM:1.66 TPM:1.54

4064

A_BomaMG_comp14082_c0_seq1

1541bp

PREDICTED:_leucine-rich_repeat_transmembrane_neuronal_protein_4_[Papilio_machaon]

GO:0004860	F	protein kinase inhibitor activity
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0006469	P	negative regulation of protein kinase activity
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0019221	P	cytokine-mediated signaling pathway
GO:0030054	C	cell junction
GO:0045202	C	synapse
GO:0045211	C	postsynaptic membrane
GO:0046426	P	negative regulation of receptor signaling pathway via JAK-STAT
GO:0050808	P	synapse organization

FPKM:41.48 TPM:38.41

4065

A_BomaMG_comp140837_c0_seq1

301bp

PREDICTED:_catenin_alpha-like,_partial_[Plutella_xylostella]

GO:0003779	F	actin binding
GO:0005198	F	structural molecule activity
GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005856	C	cytoskeleton
GO:0005886	C	plasma membrane
GO:0005912	C	adherens junction
GO:0005913	C	adherens junction
GO:0005914	C	spot adherens junction
GO:0005915	C	zonula adherens
GO:0007016	P	obsolete cytoskeletal anchoring at plasma membrane
GO:0007155	P	cell adhesion
GO:0007163	P	establishment or maintenance of cell polarity
GO:0007293	P	germarium-derived egg chamber formation
GO:0008092	F	cytoskeletal protein binding
GO:0015629	C	actin cytoskeleton
GO:0016020	C	membrane
GO:0016342	C	catenin complex
GO:0030054	C	cell junction
GO:0030055	C	cell-substrate junction
GO:0030720	P	oocyte localization involved in germarium-derived egg chamber formation
GO:0034332	P	adherens junction organization
GO:0045296	F	cadherin binding
GO:0051015	F	actin filament binding
GO:0060323	P	head morphogenesis
GO:0060429	P	epithelium development

FPKM:4.49 TPM:4.16

4066

A_BomaMG_comp14083_c0_seq1

251bp

FPKM:4.60 TPM:4.26

4067

A_BomaMG_comp14084_c0_seq1

611bp

hypothetical_protein_KGM_19524_[Danaus_plexippus]

FPKM:1.58 TPM:1.46

4068

A_BomaMG_comp14085_c0_seq1

387bp

aconitate_hydratase_[Ehrlichia_ruminantium]

FPKM:2.47 TPM:2.29

4069

A_BomaMG_comp14086_c0_seq1

324bp

PREDICTED:_uncharacterized_protein_LOC101737450_isoform_X2_[Bombyx_mori]

FPKM:2.37 TPM:2.19

4070

A_BomaMG_comp140874_c0_seq1

905bp

FPKM:1.45 TPM:1.34

4071

A_BomaMG_comp14087_c0_seq1

303bp

PREDICTED:_zinc_finger_protein_569-like_isoform_X2_[Bombyx_mori]

FPKM:1.93 TPM:1.79

4072

A_BomaMG_comp14087_c1_seq1

552bp

PREDICTED:_zinc_finger_protein_569-like_isoform_X2_[Bombyx_mori]

FPKM:1.83 TPM:1.69

4073

A_BomaMG_comp14090_c0_seq1

294bp

PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X3_[Bombyx_mori]

FPKM:2.97 TPM:2.75

4074

A_BomaMG_comp14090_c1_seq1

428bp

PREDICTED:_FERM,_RhoGEF_and_pleckstrin_domain-containing_protein_1-like_isoform_X4_[Bombyx_mori]

GO:0005085	F	guanyl-nucleotide exchange factor activity
GO:0005089	F	guanyl-nucleotide exchange factor activity
GO:0005737	C	cytoplasm
GO:0005829	C	cytosol
GO:0005856	C	cytoskeleton
GO:0007155	P	cell adhesion
GO:0008092	F	cytoskeletal protein binding
GO:0016322	P	neuron remodeling
GO:0016601	P	Rac protein signal transduction
GO:0019898	C	extrinsic component of membrane
GO:0030316	P	osteoclast differentiation
GO:0030676	F	guanyl-nucleotide exchange factor activity
GO:0031532	P	actin cytoskeleton reorganization
GO:0033623	P	regulation of integrin activation
GO:0035023	P	regulation of Rho protein signal transduction
GO:0043547	P	positive regulation of GTPase activity
GO:0071526	P	semaphorin-plexin signaling pathway
GO:0071800	P	podosome assembly