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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3661

A_BomaMG_comp13740_c0_seq1

499bp

PREDICTED:_heparan-sulfate_6-O-sulfotransferase_2_[Bombyx_mori]

GO:0008146	F	sulfotransferase activity
GO:0015015	P	heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016740	F	transferase activity
GO:0017095	F	heparan sulfate 6-O-sulfotransferase activity
GO:0060173	P	limb development

FPKM:1.49 TPM:1.38

3662

A_BomaMG_comp13742_c0_seq1

221bp

hypothetical_protein_KGM_12495_[Danaus_plexippus]

FPKM:0.71 TPM:0.66

3663

A_BomaMG_comp13744_c0_seq1

449bp

FPKM:1.77 TPM:1.64

3664

A_BomaMG_comp13747_c0_seq1

499bp

PREDICTED:_probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]

GO:0000166	F	nucleotide binding
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0004004	F	RNA helicase activity
GO:0004386	F	helicase activity
GO:0005515	F	protein binding
GO:0005524	F	ATP binding
GO:0005634	C	nucleus
GO:0005783	C	endoplasmic reticulum
GO:0006396	P	RNA processing
GO:0008186	F	ATP-dependent activity, acting on RNA
GO:0016787	F	hydrolase activity
GO:0034612	P	response to tumor necrosis factor
GO:0044822	F	RNA binding
GO:0044829	P	positive regulation by host of viral genome replication
GO:0070063	F	RNA polymerase binding
GO:0070555	P	response to interleukin-1
GO:1990247	F	N6-methyladenosine-containing RNA binding

FPKM:1.71 TPM:1.58

3665

A_BomaMG_comp13748_c0_seq1

204bp

FPKM:3.95 TPM:3.66

3666

A_BomaMG_comp13749_c0_seq1

227bp

FPKM:2.57 TPM:2.38

3667

A_BomaMG_comp137507_c0_seq1

478bp

serine_hydroxymethyltransferase_[Bombyx_mori]

GO:0003682	F	chromatin binding
GO:0003824	F	catalytic activity
GO:0004372	F	glycine hydroxymethyltransferase activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0005743	C	mitochondrial inner membrane
GO:0005758	C	mitochondrial intermembrane space
GO:0005759	C	mitochondrial matrix
GO:0006544	P	glycine metabolic process
GO:0006545	P	glycine biosynthetic process
GO:0006563	P	L-serine metabolic process
GO:0006564	P	L-serine biosynthetic process
GO:0006730	P	one-carbon metabolic process
GO:0008284	P	positive regulation of cell population proliferation
GO:0008732	F	L-allo-threonine aldolase activity
GO:0015630	C	microtubule cytoskeleton
GO:0016020	C	membrane
GO:0016597	F	amino acid binding
GO:0016740	F	transferase activity
GO:0019264	P	glycine biosynthetic process from serine
GO:0030170	F	pyridoxal phosphate binding
GO:0034340	P	response to type I interferon
GO:0035999	P	tetrahydrofolate interconversion
GO:0042645	C	mitochondrial nucleoid
GO:0042802	F	identical protein binding
GO:0046653	P	tetrahydrofolate metabolic process
GO:0046655	P	folic acid metabolic process
GO:0051262	P	protein tetramerization
GO:0051289	P	protein homotetramerization
GO:0070062	C	extracellular exosome
GO:0070536	P	protein K63-linked deubiquitination
GO:0070552	C	BRISC complex

FPKM:2.29 TPM:2.12

3668

A_BomaMG_comp13751_c0_seq1

673bp

_putative_cuticle_protein_[Bombyx_mori]

GO:0042302

structural constituent of cuticle

FPKM:1.31 TPM:1.21

3669

A_BomaMG_comp13752_c0_seq1

654bp

PREDICTED:_zinc_finger_protein_677-like_isoform_X1_[Bombyx_mori]

FPKM:0.91 TPM:0.85

3670

A_BomaMG_comp13752_c0_seq2

607bp

PREDICTED:_zinc_finger_protein_677-like_isoform_X1_[Bombyx_mori]

FPKM:0.74 TPM:0.68

3671

A_BomaMG_comp13753_c0_seq1

405bp

FPKM:1.37 TPM:1.26

3672

A_BomaMG_comp137542_c0_seq1

263bp

olfactory_receptor_[Bombyx_mori]

FPKM:1.60 TPM:1.48

3673

A_BomaMG_comp13754_c0_seq1

501bp

conserved_hypothetical_protein_[Culex_quinquefasciatus]

FPKM:1.38 TPM:1.28

3674

A_BomaMG_comp13757_c0_seq1

377bp

PREDICTED:_uncharacterized_protein_LOC105390745_[Plutella_xylostella]

FPKM:1.91 TPM:1.77

3675

A_BomaMG_comp13758_c0_seq1

281bp

hypothetical_protein_[Ramlibacter_tataouinensis]

FPKM:0.67 TPM:0.62

3676

A_BomaMG_comp13759_c0_seq1

428bp

PREDICTED:_inositol_oxygenase-like_[Bombyx_mori]

GO:0004033	F	aldo-keto reductase (NADP) activity
GO:0005506	F	iron ion binding
GO:0005737	C	cytoplasm
GO:0008199	F	ferric iron binding
GO:0016234	C	inclusion body
GO:0016491	F	oxidoreductase activity
GO:0016651	F	oxidoreductase activity, acting on NAD(P)H
GO:0016701	F	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
GO:0019310	P	inositol catabolic process
GO:0046872	F	metal ion binding
GO:0050113	F	inositol oxygenase activity
GO:0055114	P	obsolete oxidation-reduction process
GO:0070062	C	extracellular exosome

FPKM:1.38 TPM:1.27

3677

A_BomaMG_comp13760_c0_seq1

379bp

FPKM:1.37 TPM:1.27

3678

A_BomaMG_comp13762_c0_seq1

250bp

PREDICTED:_zinc_finger_protein_14_homolog_[Amyelois_transitella]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0042802	F	identical protein binding
GO:0046872	F	metal ion binding

FPKM:3.21 TPM:2.97

3679

A_BomaMG_comp13762_c1_seq1

201bp

PREDICTED:_zinc_finger_protein_OZF-like_[Plutella_xylostella]

GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0046872	F	metal ion binding
GO:0071333	P	cellular response to glucose stimulus

FPKM:4.22 TPM:3.91

3680

A_BomaMG_comp13763_c0_seq1

771bp

PREDICTED:_oxysterol-binding_protein_1_[Papilio_xuthus]

GO:0000139	C	Golgi membrane
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005654	C	nucleoplasm
GO:0005730	C	nucleolus
GO:0005737	C	cytoplasm
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0005794	C	Golgi apparatus
GO:0005829	C	cytosol
GO:0006810	P	transport
GO:0006869	P	lipid transport
GO:0008142	F	oxysterol binding
GO:0008289	F	lipid binding
GO:0015248	F	sterol transporter activity
GO:0015918	P	sterol transport
GO:0016020	C	membrane
GO:0019904	F	protein domain specific binding
GO:0030054	C	cell junction
GO:0044128	P	obsolete positive regulation of growth of symbiont in host
GO:0048471	C	perinuclear region of cytoplasm
GO:0070273	F	phosphatidylinositol-4-phosphate binding

FPKM:18.15 TPM:16.81

3681

A_BomaMG_comp13765_c0_seq1

260bp

Microtubule-associated_protein_2,_partial_[Stegodyphus_mimosarum]

FPKM:0.41 TPM:0.38

3682

A_BomaMG_comp13765_c0_seq2

237bp

FPKM:2.21 TPM:2.05

3683

A_BomaMG_comp13766_c0_seq1

489bp

FPKM:1.54 TPM:1.43

3684

A_BomaMG_comp13766_c1_seq1

236bp

FPKM:1.68 TPM:1.56

3685

A_BomaMG_comp13767_c0_seq1

1172bp

PREDICTED:_eukaryotic_translation_initiation_factor_2_alpha_subunit_isoform_X1_[Bombyx_mori]

GO:0000022	P	mitotic spindle elongation
GO:0000049	F	tRNA binding
GO:0001677	P	formation of translation initiation ternary complex
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0003743	F	translation initiation factor activity
GO:0005525	F	GTP binding
GO:0005829	C	cytosol
GO:0005840	C	ribosome
GO:0005850	C	eukaryotic translation initiation factor 2 complex
GO:0005851	C	eukaryotic translation initiation factor 2B complex
GO:0005875	C	microtubule associated complex
GO:0006412	P	translation
GO:0006413	P	translational initiation
GO:0007052	P	mitotic spindle organization
GO:0033290	C	eukaryotic 48S preinitiation complex
GO:0043022	F	ribosome binding
GO:0043614	C	multi-eIF complex