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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3631

A_BomaMG_comp13707_c0_seq1

337bp

FPKM:1.30 TPM:1.21

3632

A_BomaMG_comp13708_c0_seq1

245bp

hypothetical_protein_DICSQDRAFT_45785_[Dichomitus_squalens_LYAD-421_SS1]

FPKM:1.49 TPM:1.38

3633

A_BomaMG_comp13709_c0_seq1

726bp

mitochondrial_ribosomal_protein_L22_[Bombyx_mori]

GO:0003674	F	molecular_function
GO:0003735	F	structural constituent of ribosome
GO:0005739	C	mitochondrion
GO:0005840	C	ribosome
GO:0006412	P	translation
GO:0008150	P	biological_process
GO:0015934	C	large ribosomal subunit
GO:0030529	C	ribonucleoprotein complex

FPKM:22.45 TPM:20.79

3634

A_BomaMG_comp13710_c0_seq1

428bp

PREDICTED:_cuticular_protein_RR-1_motif_21_isoform_X1_[Bombyx_mori]

FPKM:1.24 TPM:1.15

3635

A_BomaMG_comp13711_c0_seq1

326bp

PREDICTED:_uncharacterized_protein_LOC106142232_[Amyelois_transitella]

FPKM:1.40 TPM:1.30

3636

A_BomaMG_comp13712_c0_seq1

606bp

PREDICTED:_uncharacterized_protein_LOC106135998_[Amyelois_transitella]

FPKM:1.36 TPM:1.26

3637

A_BomaMG_comp13713_c0_seq1

256bp

FPKM:2.16 TPM:2.00

3638

A_BomaMG_comp13714_c0_seq1

448bp

FPKM:1.40 TPM:1.30

3639

A_BomaMG_comp137152_c0_seq1

493bp

FPKM:2.07 TPM:1.91

3640

A_BomaMG_comp13715_c0_seq1

458bp

FPKM:1.84 TPM:1.70

3641

A_BomaMG_comp13716_c0_seq1

472bp

FPKM:1.75 TPM:1.62

3642

A_BomaMG_comp13717_c0_seq1

688bp

FPKM:2.74 TPM:2.54

3643

A_BomaMG_comp13718_c0_seq1

219bp

Histone-lysine_N-methyltransferase_SETMAR_[Cerapachys_biroi]

GO:0000014	F	single-stranded DNA endodeoxyribonuclease activity
GO:0000729	P	DNA double-strand break processing
GO:0000737	P	DNA catabolic process, endonucleolytic
GO:0000793	C	condensed chromosome
GO:0003677	F	DNA binding
GO:0003690	F	double-stranded DNA binding
GO:0003697	F	single-stranded DNA binding
GO:0003824	F	catalytic activity
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0005515	F	protein binding
GO:0005634	C	nucleus
GO:0005694	C	chromosome
GO:0006281	P	DNA repair
GO:0006303	P	double-strand break repair via nonhomologous end joining
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008152	P	metabolic process
GO:0008168	F	methyltransferase activity
GO:0008270	F	zinc ion binding
GO:0008283	P	cell population proliferation
GO:0010452	P	histone H3-K36 methylation
GO:0015074	P	DNA integration
GO:0016568	P	chromatin organization
GO:0016740	F	transferase activity
GO:0016787	F	hydrolase activity
GO:0018024	F	histone-lysine N-methyltransferase activity
GO:0031297	P	replication fork processing
GO:0032259	P	methylation
GO:0034968	P	histone lysine methylation
GO:0035861	C	site of double-strand break
GO:0042800	F	histone methyltransferase activity (H3-K4 specific)
GO:0042803	F	protein homodimerization activity
GO:0043566	F	DNA binding
GO:0044547	F	DNA topoisomerase binding
GO:0044774	P	mitotic DNA integrity checkpoint signaling
GO:0046872	F	metal ion binding
GO:0046975	F	histone methyltransferase activity (H3-K36 specific)
GO:0051568	P	histone H3-K4 methylation
GO:0071157	P	regulation of cell cycle
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis
GO:0097676	P	histone H3-K36 dimethylation
GO:2000373	P	positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034	P	positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251	P	negative regulation of chromosome organization

FPKM:1.47 TPM:1.36

3644

A_BomaMG_comp13719_c0_seq1

365bp

putative_PAP2_family_protein_[Clostridium_sp._D5]

FPKM:3.51 TPM:3.25

3645

A_BomaMG_comp1371_c0_seq1

262bp

PREDICTED:_ryanodine_receptor_44F_isoform_X18_[Bombyx_mori]

GO:0005216	F	ion channel activity
GO:0005219	F	ryanodine-sensitive calcium-release channel activity
GO:0005262	F	calcium channel activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0005875	C	microtubule associated complex
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006816	P	calcium ion transport
GO:0006874	P	cellular calcium ion homeostasis
GO:0006936	P	muscle contraction
GO:0007275	P	multicellular organism development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016529	C	sarcoplasmic reticulum
GO:0033017	C	sarcoplasmic reticulum membrane
GO:0035206	P	regulation of hemocyte proliferation
GO:0051209	P	release of sequestered calcium ion into cytosol
GO:0055085	P	transmembrane transport
GO:0060047	P	heart contraction
GO:0070588	P	calcium ion transmembrane transport
GO:0072347	P	response to anesthetic

FPKM:1.62 TPM:1.50

3646

A_BomaMG_comp1371_c1_seq1

346bp

PREDICTED:_ryanodine_receptor_44F_isoform_X23_[Bombyx_mori]

GO:0005216	F	ion channel activity
GO:0005219	F	ryanodine-sensitive calcium-release channel activity
GO:0005262	F	calcium channel activity
GO:0005789	C	endoplasmic reticulum membrane
GO:0005875	C	microtubule associated complex
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006816	P	calcium ion transport
GO:0006874	P	cellular calcium ion homeostasis
GO:0006936	P	muscle contraction
GO:0007275	P	multicellular organism development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016529	C	sarcoplasmic reticulum
GO:0033017	C	sarcoplasmic reticulum membrane
GO:0035206	P	regulation of hemocyte proliferation
GO:0051209	P	release of sequestered calcium ion into cytosol
GO:0055085	P	transmembrane transport
GO:0060047	P	heart contraction
GO:0070588	P	calcium ion transmembrane transport
GO:0072347	P	response to anesthetic

FPKM:1.23 TPM:1.14

3647

A_BomaMG_comp137207_c0_seq1

1400bp

protein_O-fucosyltransferase_2_precursor_[Bombyx_mori]

GO:0001707	P	mesoderm formation
GO:0005783	C	endoplasmic reticulum
GO:0005789	C	endoplasmic reticulum membrane
GO:0005794	C	Golgi apparatus
GO:0005975	P	carbohydrate metabolic process
GO:0006004	P	fucose metabolic process
GO:0006486	P	protein glycosylation
GO:0008417	F	fucosyltransferase activity
GO:0010468	P	regulation of gene expression
GO:0010717	P	regulation of epithelial to mesenchymal transition
GO:0016740	F	transferase activity
GO:0016757	F	glycosyltransferase activity
GO:0036065	P	fucosylation
GO:0036066	P	protein O-linked fucosylation
GO:0046922	F	peptide-O-fucosyltransferase activity
GO:0051046	P	regulation of secretion

FPKM:2.16 TPM:2.00

3648

A_BomaMG_comp13721_c0_seq1

381bp

PREDICTED:_survivin-1_isoform_X1_[Bombyx_mori]

FPKM:4.59 TPM:4.25

3649

A_BomaMG_comp13725_c0_seq1

543bp

PREDICTED:_lysozyme-like_[Bombyx_mori]

GO:0003796	F	lysozyme activity
GO:0003824	F	catalytic activity
GO:0008152	P	metabolic process
GO:0016787	F	hydrolase activity
GO:0016798	F	hydrolase activity, acting on glycosyl bonds
GO:0019835	P	cytolysis
GO:0042742	P	defense response to bacterium

FPKM:1.22 TPM:1.13

3650

A_BomaMG_comp13726_c0_seq1

363bp

PREDICTED:_ankyrin_repeat_domain-containing_protein_12_[Bombyx_mori]

FPKM:2.05 TPM:1.90

3651

A_BomaMG_comp13727_c0_seq1

744bp

signal_recognition_particle_14_kDa_protein-like_protein_[Bombyx_mori]

GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005786	C	signal recognition particle, endoplasmic reticulum targeting
GO:0006614	P	SRP-dependent cotranslational protein targeting to membrane
GO:0008312	F	7S RNA binding
GO:0030529	C	ribonucleoprotein complex
GO:0030942	F	endoplasmic reticulum signal peptide binding
GO:0042493	P	response to xenobiotic stimulus
GO:0044822	F	RNA binding
GO:0045047	P	protein targeting to ER
GO:0048500	C	signal recognition particle
GO:0070062	C	extracellular exosome

FPKM:24.26 TPM:22.47

3652

A_BomaMG_comp13728_c0_seq1

479bp

PREDICTED:_LOW_QUALITY_PROTEIN:_CD109_antigen-like,_partial_[Bombyx_mori]

FPKM:1.60 TPM:1.48

3653

A_BomaMG_comp1372_c0_seq1

220bp

putative_fatty_acyl_reductase_FAR12_[Spodoptera_litura]

GO:0005777	C	peroxisome
GO:0006629	P	lipid metabolic process
GO:0010025	P	wax biosynthetic process
GO:0012505	C	endomembrane system
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0016491	F	oxidoreductase activity
GO:0016620	F	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0035336	P	long-chain fatty-acyl-CoA metabolic process
GO:0050062	F	long-chain-fatty-acyl-CoA reductase activity
GO:0055114	P	obsolete oxidation-reduction process
GO:0080019	F	fatty-acyl-CoA reductase (alcohol-forming) activity