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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3601 A_BomaMG_comp13682_c0_seq1
312bp
PREDICTED:_probable_ATP-dependent_RNA_helicase_spindle-E_[Bombyx_mori]
FPKM:2.32 TPM:2.15
3602 A_BomaMG_comp136835_c0_seq1
458bp
PREDICTED:_wiskott-Aldrich_syndrome_protein_family_member_2_[Bombyx_mori]
FPKM:3.07 TPM:2.84
3603 A_BomaMG_comp13685_c0_seq1
722bp
PREDICTED:_WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X2_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035320 P imaginal disc-derived wing hair site selection
GO:0042995 C cell projection
FPKM:2.07 TPM:1.91
3604 A_BomaMG_comp13685_c1_seq1
222bp
PREDICTED:_WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X2_[Bombyx_mori]
FPKM:4.19 TPM:3.88
3605 A_BomaMG_comp13686_c0_seq1
301bp
PREDICTED:_voltage-dependent_R-type_calcium_channel_subunit_alpha-1E_[Fundulus_heteroclitus]
FPKM:1.68 TPM:1.56
3606 A_BomaMG_comp136875_c0_seq1
278bp
FPKM:0.69 TPM:0.64
3607 A_BomaMG_comp13687_c0_seq1
1230bp
PREDICTED:_methyltransferase-like_protein_16_[Papilio_polytes]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
FPKM:2.19 TPM:2.03
3608 A_BomaMG_comp13687_c1_seq1
341bp
PREDICTED:_methyltransferase-like_protein_16_[Amyelois_transitella]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
FPKM:1.70 TPM:1.57
3609 A_BomaMG_comp1368_c0_seq1
460bp
FPKM:0.61 TPM:0.56
3610 A_BomaMG_comp13690_c0_seq1
670bp
FPKM:1.32 TPM:1.22
3611 A_BomaMG_comp13691_c0_seq1
212bp
ABC_transporter,_solute-binding_protein_[Lactobacillus_composti_DSM_18527_=_JCM_14202]
FPKM:0.00 TPM:0.00
3612 A_BomaMG_comp13691_c1_seq1
761bp
FPKM:1.05 TPM:0.97
3613 A_BomaMG_comp136927_c0_seq1
202bp
PREDICTED:_PR_domain_zinc_finger_protein_5-like_isoform_X3_[Bombyx_mori]
FPKM:3.10 TPM:2.87
3614 A_BomaMG_comp13692_c0_seq1
241bp
PREDICTED:_uncharacterized_protein_LOC106142350_[Amyelois_transitella]
FPKM:1.57 TPM:1.45
3615 A_BomaMG_comp13693_c0_seq1
375bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.75 TPM:1.62
3616 A_BomaMG_comp13693_c1_seq1
397bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.10 TPM:1.02
3617 A_BomaMG_comp13695_c0_seq1
421bp
FPKM:1.56 TPM:1.44
3618 A_BomaMG_comp13696_c0_seq1
271bp
reverse_transcriptase_[Bombyx_mori]
FPKM:2.21 TPM:2.04
3619 A_BomaMG_comp13698_c0_seq1
611bp
polycomb_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000790 C chromatin
GO:0000792 C heterochromatin
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016568 P chromatin organization
GO:0031519 C PcG protein complex
GO:0035064 F methylated histone binding
GO:0035102 C PRC1 complex
GO:0042493 P response to xenobiotic stimulus
GO:0048733 P sebaceous gland development
FPKM:1.74 TPM:1.61
3620 A_BomaMG_comp13699_c0_seq1
326bp
PREDICTED:_actin-related_protein_1_[Papilio_machaon]
FPKM:1.17 TPM:1.08
3621 A_BomaMG_comp136_c0_seq1
272bp
FPKM:1.09 TPM:1.01
3622 A_BomaMG_comp13700_c0_seq1
215bp
methyltransferase_type_12_[Helicobacter_sp._MIT_01-6451]
FPKM:2.38 TPM:2.20
3623 A_BomaMG_comp13701_c0_seq1
209bp
short_chain_dehydrogenase_[Myxococcus_fulvus]
FPKM:0.89 TPM:0.82
3624 A_BomaMG_comp13701_c1_seq1
269bp
septum_formation_initiator_[Microbacterium_hominis]
FPKM:2.63 TPM:2.43
3625 A_BomaMG_comp13702_c0_seq1
544bp
FPKM:2.24 TPM:2.08
3626 A_BomaMG_comp13703_c0_seq1
277bp
FPKM:2.77 TPM:2.57
3627 A_BomaMG_comp13704_c0_seq1
266bp
PREDICTED:_uncharacterized_protein_LOC105278134_[Cerapachys_biroi]
FPKM:1.94 TPM:1.79
3628 A_BomaMG_comp13705_c0_seq1
284bp
PREDICTED:_inhibitor_of_growth_protein_5_[Amyelois_transitella]
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006473 P protein acetylation
GO:0008270 F zinc ion binding
GO:0008285 P negative regulation of cell population proliferation
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0035064 F methylated histone binding
GO:0043065 P positive regulation of apoptotic process
GO:0043966 P histone H3 acetylation
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0070776 C MOZ/MORF histone acetyltransferase complex
GO:2001235 P positive regulation of apoptotic signaling pathway
FPKM:1.62 TPM:1.50
3629 A_BomaMG_comp13706_c0_seq1
257bp
PREDICTED:_protein_Jumonji_isoform_X2_[Bombyx_mori]
FPKM:0.43 TPM:0.40
3630 A_BomaMG_comp13706_c1_seq1
399bp
PREDICTED:_protein_Jumonji_isoform_X1_[Bombyx_mori]
FPKM:1.56 TPM:1.44
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