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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

3571

A_BomaMG_comp13655_c0_seq1

391bp

PREDICTED:_protein_strawberry_notch-like_[Bombyx_mori]

FPKM:1.46 TPM:1.35

3572

A_BomaMG_comp13656_c0_seq1

392bp

FPKM:1.61 TPM:1.49

3573

A_BomaMG_comp13658_c0_seq1

203bp

endonuclease-reverse_transcriptase_[Bombyx_mori]

FPKM:2.02 TPM:1.87

3574

A_BomaMG_comp13659_c0_seq1

779bp

PREDICTED:_ATP-sensitive_inward_rectifier_potassium_channel_1-like_[Amyelois_transitella]

GO:0005242	F	inward rectifier potassium channel activity
GO:0005244	F	voltage-gated ion channel activity
GO:0005887	C	integral component of plasma membrane
GO:0006810	P	transport
GO:0006811	P	ion transport
GO:0006813	P	potassium ion transport
GO:0008277	P	regulation of G protein-coupled receptor signaling pathway
GO:0010107	P	potassium ion import across plasma membrane
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0034765	P	regulation of ion transmembrane transport
GO:0042995	C	cell projection
GO:0043005	C	neuron projection
GO:0043025	C	neuronal cell body
GO:0043204	C	perikaryon
GO:0046662	P	regulation of oviposition

FPKM:1.47 TPM:1.36

3575

A_BomaMG_comp13660_c0_seq1

698bp

PREDICTED:_U2_small_nuclear_ribonucleoprotein_auxiliary_factor_35_kDa_subunit-related_protein_2_isoform_X1_[Amyelois_transitella]

GO:0000166	F	nucleotide binding
GO:0000398	P	mRNA splicing, via spliceosome
GO:0003676	F	nucleic acid binding
GO:0003723	F	RNA binding
GO:0005634	C	nucleus
GO:0030529	C	ribonucleoprotein complex
GO:0046872	F	metal ion binding
GO:0089701	C	U2AF complex

FPKM:1.44 TPM:1.34

3576

A_BomaMG_comp13661_c0_seq1

396bp

tan_protein_[Bombyx_mori]

FPKM:1.42 TPM:1.32

3577

A_BomaMG_comp13662_c0_seq1

485bp

FPKM:1.68 TPM:1.55

3578

A_BomaMG_comp13663_c0_seq1

392bp

transcriptional_regulator_[Thioclava_sp._DT23-4]

FPKM:1.13 TPM:1.05

3579

A_BomaMG_comp13665_c0_seq1

205bp

PREDICTED:_zinc_finger_protein_687-like_[Papilio_polytes]

FPKM:2.90 TPM:2.69

3580

A_BomaMG_comp13665_c1_seq1

545bp

FPKM:1.03 TPM:0.95

3581

A_BomaMG_comp13666_c0_seq1

391bp

FPKM:1.13 TPM:1.05

3582

A_BomaMG_comp13667_c0_seq1

376bp

hypothetical_protein_[Streptomyces_sp._CNH189]

FPKM:1.57 TPM:1.45

3583

A_BomaMG_comp13668_c0_seq1

439bp

FPKM:1.59 TPM:1.47

3584

A_BomaMG_comp13669_c0_seq1

239bp

PREDICTED:_uncharacterized_protein_LOC105842256_[Bombyx_mori]

FPKM:2.69 TPM:2.49

3585

A_BomaMG_comp1366_c0_seq1

371bp

FPKM:1.07 TPM:0.99

3586

A_BomaMG_comp13670_c0_seq1

219bp

hypothetical_protein_M513_12645,_partial_[Trichuris_suis]

FPKM:1.47 TPM:1.36

3587

A_BomaMG_comp13671_c0_seq1

229bp

laccase_2A_[Bombyx_mori]

FPKM:3.12 TPM:2.89

3588

A_BomaMG_comp13673_c0_seq1

363bp

hypothetical_protein_PHAVU_008G098700g_[Phaseolus_vulgaris]

FPKM:1.12 TPM:1.04

3589

A_BomaMG_comp13673_c1_seq1

213bp

FPKM:1.64 TPM:1.52

3590

A_BomaMG_comp13674_c0_seq1

270bp

Predicted_transcriptional_regulators_[Roseburia_inulinivorans]

FPKM:1.49 TPM:1.38

3591

A_BomaMG_comp13675_c0_seq1

434bp

hypothetical_protein_[Cupriavidus_sp._amp6]

FPKM:1.61 TPM:1.49

3592

A_BomaMG_comp13676_c0_seq1

416bp

PREDICTED:_uncharacterized_protein_LOC105842183_[Bombyx_mori]

GO:0001503	P	ossification
GO:0004871	F	obsolete signal transducer activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0004930	F	G protein-coupled receptor activity
GO:0005518	F	collagen binding
GO:0005622	C	intracellular anatomical structure
GO:0005886	C	plasma membrane
GO:0007005	P	mitochondrion organization
GO:0007165	P	signal transduction
GO:0007166	P	cell surface receptor signaling pathway
GO:0007186	P	G protein-coupled receptor signaling pathway
GO:0007507	P	heart development
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0019933	P	cAMP-mediated signaling
GO:0022011	P	myelination in peripheral nervous system
GO:0032290	P	peripheral nervous system myelin formation
GO:0042552	P	myelination
GO:0043583	P	ear development
GO:0048932	P	myelination of posterior lateral line nerve axons
GO:0050840	F	extracellular matrix binding
GO:0060347	P	heart trabecula formation
GO:0060879	P	semicircular canal fusion
GO:1903670	P	regulation of sprouting angiogenesis

FPKM:1.59 TPM:1.47

3593

A_BomaMG_comp13677_c0_seq1

472bp

PREDICTED:_probable_tRNA_N6-adenosine_threonylcarbamoyltransferase,_mitochondrial,_partial_[Papilio_machaon]

GO:0000408	C	EKC/KEOPS complex
GO:0002949	P	tRNA threonylcarbamoyladenosine modification
GO:0003674	F	molecular_function
GO:0004222	F	metalloendopeptidase activity
GO:0005575	C	cellular_component
GO:0005739	C	mitochondrion
GO:0006508	P	proteolysis
GO:0008033	P	tRNA processing
GO:0008150	P	biological_process
GO:0016740	F	transferase activity
GO:0016746	F	acyltransferase activity
GO:0046872	F	metal ion binding
GO:0061711	F	N(6)-L-threonylcarbamoyladenine synthase activity

FPKM:1.75 TPM:1.62

3594

A_BomaMG_comp13678_c0_seq1

1135bp

PREDICTED:_ribonuclease_H1_[Plutella_xylostella]

GO:0000287	F	magnesium ion binding
GO:0003676	F	nucleic acid binding
GO:0004518	F	nuclease activity
GO:0004519	F	endonuclease activity
GO:0004523	F	RNA-DNA hybrid ribonuclease activity
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0005739	C	mitochondrion
GO:0006264	P	mitochondrial DNA replication
GO:0016787	F	hydrolase activity
GO:0042803	F	protein homodimerization activity
GO:0043137	P	DNA replication, removal of RNA primer
GO:0046872	F	metal ion binding
GO:0090502	P	RNA phosphodiester bond hydrolysis, endonucleolytic