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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3541 A_BomaMG_comp13617_c0_seq1
898bp
putative_antolefinin_[Danaus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007049 P cell cycle
GO:0008150 P biological_process
GO:0017053 C transcription repressor complex
FPKM:9.45 TPM:8.75
3542 A_BomaMG_comp13618_c0_seq1
341bp
PREDICTED:_probable_ubiquitin_carboxyl-terminal_hydrolase_FAF-X_isoform_X2_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006897 P endocytosis
GO:0007275 P multicellular organism development
GO:0007349 P cellularization
GO:0007601 P visual perception
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008354 P germ cell migration
GO:0008583 P mystery cell differentiation
GO:0009950 P dorsal/ventral axis specification
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0035192 P nuclear cortical migration
GO:0036459 F thiol-dependent deubiquitinase
GO:0045824 P negative regulation of innate immune response
GO:0045861 P negative regulation of proteolysis
GO:0048477 P oogenesis
GO:0050829 P defense response to Gram-negative bacterium
GO:0050896 P response to stimulus
FPKM:2.12 TPM:1.96
3543 A_BomaMG_comp136196_c0_seq1
363bp
uncharacterized_protein_Dana_GF25113,_isoform_C_[Drosophila_ananassae]
FPKM:2.05 TPM:1.90
3544 A_BomaMG_comp13620_c0_seq1
647bp
transposase_[Antheraea_pernyi]
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000729 P DNA double-strand break processing
GO:0000737 P DNA catabolic process, endonucleolytic
GO:0000793 C condensed chromosome
GO:0003677 F DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0008168 F methyltransferase activity
GO:0008270 F zinc ion binding
GO:0008283 P cell population proliferation
GO:0010452 P histone H3-K36 methylation
GO:0015074 P DNA integration
GO:0016568 P chromatin organization
GO:0016740 F transferase activity
GO:0016787 F hydrolase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0031297 P replication fork processing
GO:0032259 P methylation
GO:0034968 P histone lysine methylation
GO:0035861 C site of double-strand break
GO:0042800 F histone methyltransferase activity (H3-K4 specific)
GO:0042803 F protein homodimerization activity
GO:0043566 F DNA binding
GO:0044547 F DNA topoisomerase binding
GO:0044774 P mitotic DNA integrity checkpoint signaling
GO:0046872 F metal ion binding
GO:0046975 F histone methyltransferase activity (H3-K36 specific)
GO:0051568 P histone H3-K4 methylation
GO:0071157 P regulation of cell cycle
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0097676 P histone H3-K36 dimethylation
GO:2000373 P positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
GO:2001034 P positive regulation of double-strand break repair via nonhomologous end joining
GO:2001251 P negative regulation of chromosome organization
FPKM:1.75 TPM:1.62
3545 A_BomaMG_comp13624_c0_seq1
1368bp
PREDICTED:_E3_ubiquitin-protein_ligase_hrd-like_protein_1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000838 C Hrd1p ubiquitin ligase ERAD-M complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007568 P aging
GO:0007611 P learning or memory
GO:0008270 F zinc ion binding
GO:0009987 P cellular process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032092 P positive regulation of protein binding
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:1904264 F ubiquitin protein ligase activity
GO:1904288 F BAT3 complex binding
GO:1990381 F ubiquitin-specific protease binding
FPKM:23.82 TPM:22.06
3546 A_BomaMG_comp13625_c0_seq1
390bp
FPKM:2.28 TPM:2.11
3547 A_BomaMG_comp13626_c0_seq1
375bp
hypothetical_protein_LOAG_15037_[Loa_loa]
FPKM:1.05 TPM:0.97
3548 A_BomaMG_comp13627_c0_seq1
336bp
PREDICTED:_spermatogenesis-associated_protein_5_[Amyelois_transitella]
FPKM:2.19 TPM:2.02
3549 A_BomaMG_comp13628_c0_seq1
274bp
FPKM:1.78 TPM:1.65
3550 A_BomaMG_comp13629_c0_seq1
424bp
PREDICTED:_uncharacterized_protein_LOC105841597_[Bombyx_mori]
FPKM:1.54 TPM:1.42
3551 A_BomaMG_comp13630_c0_seq1
440bp
FPKM:1.31 TPM:1.21
3552 A_BomaMG_comp13631_c0_seq1
494bp
PREDICTED:_inactive_ubiquitin_carboxyl-terminal_hydrolase_53_isoform_X2_[Condylura_cristata]
FPKM:1.74 TPM:1.61
3553 A_BomaMG_comp13632_c0_seq1
287bp
large-conductance_mechanosensitive_channel_[Streptococcus_suis]
FPKM:0.95 TPM:0.88
3554 A_BomaMG_comp13633_c0_seq1
877bp
Uncharacterized_protein_OBRU01_03614_[Operophtera_brumata]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:15.19 TPM:14.06
3555 A_BomaMG_comp13634_c0_seq1
692bp
DEAD/DEAH_box_helicase_domain_protein_[Rhodotorula_sp._JG-1b]
FPKM:1.53 TPM:1.41
3556 A_BomaMG_comp13636_c0_seq1
371bp
FPKM:2.32 TPM:2.15
3557 A_BomaMG_comp13637_c0_seq1
227bp
FPKM:3.86 TPM:3.58
3558 A_BomaMG_comp13638_c0_seq1
217bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.76 TPM:0.71
3559 A_BomaMG_comp1363_c0_seq1
374bp
olfactory_receptor_[Bombyx_mori]
FPKM:0.88 TPM:0.81
3560 A_BomaMG_comp136402_c0_seq1
688bp
FPKM:1.94 TPM:1.80
3561 A_BomaMG_comp13640_c0_seq1
425bp
PREDICTED:_neurofibromin_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001952 P regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0021897 P forebrain astrocyte development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0042060 P wound healing
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045545 F syndecan binding
GO:0045664 P regulation of neuron differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
FPKM:1.39 TPM:1.29
3562 A_BomaMG_comp13642_c0_seq1
344bp
FPKM:2.08 TPM:1.93
3563 A_BomaMG_comp13643_c0_seq1
250bp
FPKM:0.47 TPM:0.43
3564 A_BomaMG_comp13645_c0_seq1
565bp
FPKM:1.41 TPM:1.31
3565 A_BomaMG_comp136478_c0_seq1
617bp
FPKM:2.26 TPM:2.09
3566 A_BomaMG_comp13649_c0_seq1
433bp
PREDICTED:_HEAT_repeat-containing_protein_1_isoform_X2_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0030529 C ribonucleoprotein complex
GO:0030686 C 90S preribosome
GO:0032040 C small-subunit processome
GO:0034455 C t-UTP complex
GO:0042254 P ribosome biogenesis
GO:0043066 P negative regulation of apoptotic process
GO:0043487 P regulation of RNA stability
GO:0045943 P positive regulation of transcription by RNA polymerase I
FPKM:1.48 TPM:1.37
3567 A_BomaMG_comp1364_c0_seq1
215bp
FPKM:3.17 TPM:2.93
3568 A_BomaMG_comp1364_c1_seq1
319bp
FPKM:1.23 TPM:1.13
3569 A_BomaMG_comp13650_c0_seq1
249bp
PREDICTED:_uncharacterized_protein_LOC101743229_isoform_X1_[Bombyx_mori]
FPKM:3.77 TPM:3.49
3570 A_BomaMG_comp136544_c0_seq1
319bp
FPKM:2.45 TPM:2.27
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