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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
3511 A_BomaMG_comp13590_c1_seq1
306bp
FPKM:1.89 TPM:1.75
3512 A_BomaMG_comp135910_c0_seq1
490bp
FPKM:2.53 TPM:2.34
3513 A_BomaMG_comp13591_c0_seq1
300bp
PREDICTED:_solute_carrier_family_41_member_1-like_isoform_X2_[Papilio_polytes]
FPKM:1.98 TPM:1.83
3514 A_BomaMG_comp13592_c0_seq1
320bp
FPKM:0.97 TPM:0.90
3515 A_BomaMG_comp13593_c0_seq1
529bp
PREDICTED:_tau-like_protein_isoform_X1_[Bombyx_mori]
FPKM:1.46 TPM:1.35
3516 A_BomaMG_comp13594_c0_seq1
476bp
PREDICTED:_uncharacterized_protein_LOC106135229_[Amyelois_transitella]
FPKM:1.61 TPM:1.49
3517 A_BomaMG_comp13596_c0_seq1
242bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3518 A_BomaMG_comp13596_c0_seq2
236bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:2.81 TPM:2.60
3519 A_BomaMG_comp13597_c0_seq1
290bp
FPKM:2.15 TPM:1.99
3520 A_BomaMG_comp13597_c1_seq1
217bp
FPKM:1.53 TPM:1.41
3521 A_BomaMG_comp13598_c0_seq1
345bp
FPKM:1.24 TPM:1.15
3522 A_BomaMG_comp13599_c0_seq1
352bp
FPKM:1.79 TPM:1.65
3523 A_BomaMG_comp13599_c1_seq1
208bp
FPKM:0.91 TPM:0.84
3524 A_BomaMG_comp1359_c0_seq1
229bp
FPKM:1.87 TPM:1.73
3525 A_BomaMG_comp13600_c0_seq1
460bp
FPKM:0.97 TPM:0.90
3526 A_BomaMG_comp13601_c0_seq1
414bp
reverse_transcriptase_[Operophtera_brumata]
FPKM:1.75 TPM:1.62
3527 A_BomaMG_comp13601_c1_seq1
349bp
FPKM:1.82 TPM:1.68
3528 A_BomaMG_comp13602_c0_seq1
407bp
PREDICTED:_uncharacterized_protein_LOC101741865_[Bombyx_mori]
FPKM:1.35 TPM:1.25
3529 A_BomaMG_comp13605_c0_seq1
257bp
PREDICTED:_uncharacterized_protein_LOC101739791_isoform_X3_[Bombyx_mori]
FPKM:1.71 TPM:1.58
3530 A_BomaMG_comp13605_c0_seq2
229bp
PREDICTED:_uncharacterized_protein_LOC101739791_isoform_X4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
3531 A_BomaMG_comp13607_c0_seq1
227bp
PREDICTED:_SET_and_MYND_domain-containing_protein_5_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:3.22 TPM:2.98
3532 A_BomaMG_comp13607_c1_seq1
224bp
PREDICTED:_SET_and_MYND_domain-containing_protein_5_[Papilio_polytes]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0046872 F metal ion binding
FPKM:1.35 TPM:1.25
3533 A_BomaMG_comp13609_c0_seq1
332bp
uncharacterized_protein_LOC101739895_[Bombyx_mori]
FPKM:2.02 TPM:1.87
3534 A_BomaMG_comp136102_c0_seq1
499bp
PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_RFWD2-like_[Papilio_machaon]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005925 C focal adhesion
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
FPKM:3.31 TPM:3.06
3535 A_BomaMG_comp13612_c0_seq1
1970bp
PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X3_[Bombyx_mori]
FPKM:2.61 TPM:2.42
3536 A_BomaMG_comp13612_c1_seq1
338bp
PREDICTED:_nuclear_factor_related_to_kappa-B-binding_protein_isoform_X1_[Bombyx_mori]
GO:0002020 F protease binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0031011 C Ino80 complex
FPKM:2.37 TPM:2.20
3537 A_BomaMG_comp136132_c0_seq1
405bp
FPKM:1.52 TPM:1.40
3538 A_BomaMG_comp13613_c0_seq1
290bp
FPKM:1.23 TPM:1.14
3539 A_BomaMG_comp13616_c0_seq1
224bp
FPKM:0.68 TPM:0.63
3540 A_BomaMG_comp13616_c0_seq2
230bp
FPKM:0.00 TPM:0.00
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